RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 GPR108Q9NPR9 543 aa22.68■■□□□ 1.22
AC004540.1-201ENST00000439120 PICK1Q9NRD5 415 aa22.68■■□□□ 1.22
AC004540.1-201ENST00000439120 LRP2BPQ9P2M1 347 aa22.68■■□□□ 1.22
AC004540.1-201ENST00000439120 PTPN22Q9Y2R2 807 aa22.68■■□□□ 1.22
AC004540.1-201ENST00000439120 RFX7Q2KHR2 1363 aa22.67■■□□□ 1.22
AC004540.1-201ENST00000439120 GPR75-ASB3A0A0A6YYF3 556 aa22.67■■□□□ 1.22
AC004540.1-201ENST00000439120 MCAMP43121 646 aa22.67■■□□□ 1.22
AC004540.1-201ENST00000439120 KIF22Q14807 665 aa22.67■■□□□ 1.22
AC004540.1-201ENST00000439120 TNNI3KQ59H18 835 aa22.67■■□□□ 1.22
AC004540.1-201ENST00000439120 NOL10Q9BSC4 688 aaKnown RBP22.67■■□□□ 1.22
AC004540.1-201ENST00000439120 FPGT-TNNI3KV9GXZ4 949 aa22.67■■□□□ 1.22
AC004540.1-201ENST00000439120 TLR2O60603 784 aa22.66■■□□□ 1.22
AC004540.1-201ENST00000439120 RLBP1P12271 317 aa22.66■■□□□ 1.22
AC004540.1-201ENST00000439120 NSUN4Q96CB9 384 aaKnown RBP22.66■■□□□ 1.22
AC004540.1-201ENST00000439120 ZBTB7BO15156 539 aaPredicted RBP22.65■■□□□ 1.22
AC004540.1-201ENST00000439120 MAP4K4O95819 1239 aaPredicted RBP22.65■■□□□ 1.22
AC004540.1-201ENST00000439120 DDX4Q9NQI0 724 aaKnown RBP22.65■■□□□ 1.22
AC004540.1-201ENST00000439120 KCNH4Q9UQ05 1017 aa22.65■■□□□ 1.22
AC004540.1-201ENST00000439120 ATRNL1Q5VV63 1379 aa22.64■■□□□ 1.22
AC004540.1-201ENST00000439120 DDTLA6NHG4 134 aaPredicted RBP22.64■■□□□ 1.21
AC004540.1-201ENST00000439120 SH3BP5LQ7L8J4 393 aa22.64■■□□□ 1.21
AC004540.1-201ENST00000439120 ANKRD23Q86SG2 305 aa22.64■■□□□ 1.21
AC004540.1-201ENST00000439120 SCYL3Q8IZE3 742 aa22.64■■□□□ 1.21
AC004540.1-201ENST00000439120 DBNDD2Q9BQY9 259 aa22.64■■□□□ 1.21
AC004540.1-201ENST00000439120 SNRKQ9NRH2 765 aa22.64■■□□□ 1.21
AC004540.1-201ENST00000439120 PDHXO00330 501 aa22.63■■□□□ 1.21
AC004540.1-201ENST00000439120 RHBDL3P58872 404 aa22.63■■□□□ 1.21
AC004540.1-201ENST00000439120 ZNF384Q8TF68 577 aa22.63■■□□□ 1.21
AC004540.1-201ENST00000439120 ZHX2Q9Y6X8 837 aa22.63■■□□□ 1.21
AC004540.1-201ENST00000439120 PHF20L1A8MW92 1017 aa22.62■■□□□ 1.21
AC004540.1-201ENST00000439120 CXCL11O14625 94 aa22.62■■□□□ 1.21
AC004540.1-201ENST00000439120 TNRC18O15417 2968 aaPredicted RBP22.62■■□□□ 1.21
AC004540.1-201ENST00000439120 MS4A1P11836 297 aa22.62■■□□□ 1.21
AC004540.1-201ENST00000439120 MAST2Q6P0Q8 1798 aa22.62■■□□□ 1.21
AC004540.1-201ENST00000439120 CTNND1O60716 968 aaKnown RBP22.61■■□□□ 1.21
AC004540.1-201ENST00000439120 NPM3O75607 178 aaKnown RBP22.61■■□□□ 1.21
AC004540.1-201ENST00000439120 DOCK1Q14185 1865 aa22.61■■□□□ 1.21
AC004540.1-201ENST00000439120 NAA16Q6N069 864 aaPredicted RBP22.61■■□□□ 1.21
AC004540.1-201ENST00000439120 TEX11Q8IYF3 940 aa22.61■■□□□ 1.21
AC004540.1-201ENST00000439120 PANK1Q8TE04 598 aa22.61■■□□□ 1.21
AC004540.1-201ENST00000439120 NOP58Q9Y2X3 529 aaKnown RBP22.61■■□□□ 1.21
AC004540.1-201ENST00000439120 BAG3O95817 575 aa22.6■■□□□ 1.21
AC004540.1-201ENST00000439120 PTPRAP18433 802 aa22.6■■□□□ 1.21
AC004540.1-201ENST00000439120 LACTBP83111 547 aaPredicted RBP22.6■■□□□ 1.21
AC004540.1-201ENST00000439120 MAP3K10Q02779 954 aa22.6■■□□□ 1.21
AC004540.1-201ENST00000439120 SLC9C1Q4G0N8 1177 aa22.6■■□□□ 1.21
AC004540.1-201ENST00000439120 FASTKD5Q7L8L6 764 aaKnown RBP22.6■■□□□ 1.21
AC004540.1-201ENST00000439120 NBPF11Q86T75 865 aa22.6■■□□□ 1.21
AC004540.1-201ENST00000439120 PARK7Q99497 189 aaKnown RBP22.6■■□□□ 1.21
AC004540.1-201ENST00000439120 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.6■■□□□ 1.21
AC004540.1-201ENST00000439120 CPA4Q9UI42 421 aa22.6■■□□□ 1.21
AC004540.1-201ENST00000439120 PLCG2P16885 1265 aa22.59■■□□□ 1.21
AC004540.1-201ENST00000439120 CAP1Q01518 475 aa22.59■■□□□ 1.21
AC004540.1-201ENST00000439120 CEP85Q6P2H3 762 aa22.59■■□□□ 1.21
AC004540.1-201ENST00000439120 ARMC5Q96C12 935 aa22.59■■□□□ 1.21
AC004540.1-201ENST00000439120 OSBPL5Q9H0X9 879 aaPredicted RBP22.59■■□□□ 1.21
AC004540.1-201ENST00000439120 PTCH2Q9Y6C5 1203 aa22.59■■□□□ 1.21
AC004540.1-201ENST00000439120 COL2A1P02458 1487 aaPredicted RBP22.59■■□□□ 1.21
AC004540.1-201ENST00000439120 ECM2O94769 699 aaPredicted RBP22.58■■□□□ 1.21
AC004540.1-201ENST00000439120 GNRH1P01148 92 aa22.58■■□□□ 1.21
AC004540.1-201ENST00000439120 GADL1Q6ZQY3 521 aa22.58■■□□□ 1.21
AC004540.1-201ENST00000439120 ERC1Q8IUD2 1116 aa22.58■■□□□ 1.21
AC004540.1-201ENST00000439120 ZNF512BQ96KM6 892 aaPredicted RBP22.58■■□□□ 1.21
AC004540.1-201ENST00000439120 ARHGAP39Q9C0H5 1083 aa22.58■■□□□ 1.21
AC004540.1-201ENST00000439120 CCDC8Q9H0W5 538 aaPredicted RBP22.58■■□□□ 1.21
AC004540.1-201ENST00000439120 AATFQ9NY61 560 aaKnown RBP eCLIP22.58■■□□□ 1.21
AC004540.1-201ENST00000439120 HTTP42858 3142 aa22.58■■□□□ 1.21
AC004540.1-201ENST00000439120 TBC1D12O60347 775 aa22.57■■□□□ 1.2
AC004540.1-201ENST00000439120 CYP2E1P05181 493 aaPredicted RBP22.57■■□□□ 1.2
AC004540.1-201ENST00000439120 MOGSQ13724 837 aa22.57■■□□□ 1.2
AC004540.1-201ENST00000439120 C17orf99Q6UX52 265 aa22.57■■□□□ 1.2
AC004540.1-201ENST00000439120 SH3RF3Q8TEJ3 882 aaPredicted RBP22.57■■□□□ 1.2
AC004540.1-201ENST00000439120 DBNLQ9UJU6 430 aaKnown RBP22.57■■□□□ 1.2
AC004540.1-201ENST00000439120 AFG3L2Q9Y4W6 797 aa22.57■■□□□ 1.2
AC004540.1-201ENST00000439120 A0A0G2JLL6 359 aaPredicted RBP22.56■■□□□ 1.2
AC004540.1-201ENST00000439120 TRIM75PA6NK02 468 aa22.56■■□□□ 1.2
AC004540.1-201ENST00000439120 FAM196BA6NMK8 535 aa22.56■■□□□ 1.2
AC004540.1-201ENST00000439120 SLURP2P0DP57 97 aa22.56■■□□□ 1.2
AC004540.1-201ENST00000439120 ZAP70P43403 619 aa22.56■■□□□ 1.2
AC004540.1-201ENST00000439120 PRRT2Q7Z6L0 340 aaPredicted RBP22.56■■□□□ 1.2
AC004540.1-201ENST00000439120 TMEM106CQ9BVX2 250 aa22.56■■□□□ 1.2
AC004540.1-201ENST00000439120 TLR7Q9NYK1 1049 aaKnown RBP22.56■■□□□ 1.2
AC004540.1-201ENST00000439120 EXOC6BQ9Y2D4 811 aa22.56■■□□□ 1.2
AC004540.1-201ENST00000439120 ZSWIM8A7E2V4 1837 aa22.56■■□□□ 1.2
AC004540.1-201ENST00000439120 POTEFA5A3E0 1075 aa22.55■■□□□ 1.2
AC004540.1-201ENST00000439120 IGSF3O75054 1194 aa22.55■■□□□ 1.2
AC004540.1-201ENST00000439120 PRMT2P55345 433 aa22.55■■□□□ 1.2
AC004540.1-201ENST00000439120 HSP90AB4PQ58FF6 505 aa22.55■■□□□ 1.2
AC004540.1-201ENST00000439120 EAF2Q96CJ1 260 aaPredicted RBP22.55■■□□□ 1.2
AC004540.1-201ENST00000439120 RBBP6Q7Z6E9 1792 aaKnown RBP22.54■■□□□ 1.2
AC004540.1-201ENST00000439120 FMNL1O95466 1100 aaPredicted RBP22.54■■□□□ 1.2
AC004540.1-201ENST00000439120 CYP2C8P10632 490 aa22.54■■□□□ 1.2
AC004540.1-201ENST00000439120 HOXD10P28358 340 aa22.54■■□□□ 1.2
AC004540.1-201ENST00000439120 PSMC4P43686 418 aa22.54■■□□□ 1.2
AC004540.1-201ENST00000439120 GPAT2Q6NUI2 795 aa22.54■■□□□ 1.2
AC004540.1-201ENST00000439120 ZNF333Q96JL9 665 aa22.54■■□□□ 1.2
AC004540.1-201ENST00000439120 TRIM34Q9BYJ4 488 aa22.54■■□□□ 1.2
AC004540.1-201ENST00000439120 DHX36Q9H2U1 1008 aaKnown RBP22.54■■□□□ 1.2
AC004540.1-201ENST00000439120 HERC5Q9UII4 1024 aaKnown RBP22.54■■□□□ 1.2
AC004540.1-201ENST00000439120 CENPFP49454 3210 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms