RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 TRIM56Q9BRZ2 755 aaKnown RBP5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 BCL11AQ9H165 835 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 PRDM16Q9HAZ2 1276 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 VAV3Q9UKW4 847 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 USTQ9Y2C2 406 aa5.16□□□□□ -1.58
HMGB1P12-201ENST00000438594 FAM13AO94988 1023 aa5.15□□□□□ -1.59
HMGB1P12-201ENST00000438594 ZNF865P0CJ78 1059 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P12-201ENST00000438594 NCLP19338 710 aaKnown RBP5.15□□□□□ -1.59
HMGB1P12-201ENST00000438594 ITIH2P19823 946 aa5.15□□□□□ -1.59
HMGB1P12-201ENST00000438594 PRKCQQ04759 706 aa5.15□□□□□ -1.59
HMGB1P12-201ENST00000438594 IFI16Q16666 785 aaKnown RBP5.15□□□□□ -1.59
HMGB1P12-201ENST00000438594 TCF12Q99081 682 aa5.15□□□□□ -1.59
HMGB1P12-201ENST00000438594 GSX1Q9H4S2 264 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P12-201ENST00000438594 PRDM7Q9NQW5 492 aa5.15□□□□□ -1.59
HMGB1P12-201ENST00000438594 LEFTY1O75610 366 aa5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 RAP1GAPP47736 663 aa5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 ZNF157P51786 506 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 KCNMB1Q16558 191 aa5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 ANGEL2Q5VTE6 544 aaKnown RBP5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 SMYD4Q8IYR2 804 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 ZNF526Q8TF50 670 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 TOX2Q96NM4 488 aa5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 EHD4Q9H223 541 aa5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 SSU72Q9NP77 194 aaKnown RBP5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 CCDC87Q9NVE4 849 aa5.14□□□□□ -1.59
HMGB1P12-201ENST00000438594 TMPRSS2O15393 492 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 FZD6O60353 706 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 B3GALT4O96024 378 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 ABL1P00519 1130 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 SLFN14P0C7P3 912 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 HCLS1P14317 486 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 AP3B2Q13367 1082 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 TXNDC2Q86VQ3 553 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 ZSWIM9Q86XI8 627 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 GALNT12Q8IXK2 581 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 SREK1Q8WXA9 508 aaKnown RBP5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 MRRFQ96E11 262 aaKnown RBP5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 ATXN3LQ9H3M9 355 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 ZNF576Q9H609 170 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 ANO2Q9NQ90 1003 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 U3KQE9 123 aa5.13□□□□□ -1.59
HMGB1P12-201ENST00000438594 TMEM265A0A087WTH1 108 aa5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 CARNS1A5YM72 827 aa5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 CEACAM5P06731 702 aa5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 ID3Q02535 119 aa5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 MESP2Q0VG99 397 aa5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 ZSCAN18Q8TBC5 510 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 WDR89Q96FK6 387 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 C8orf37Q96NL8 207 aa5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 FANCD2OSQ96PS1 177 aa5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 CCDC86Q9H6F5 360 aaKnown RBP5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 FAM53CQ9NYF3 392 aa5.12□□□□□ -1.59
HMGB1P12-201ENST00000438594 LOC102724159A0A0B4J2E5 919 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 ANKRD62A6NC57 917 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 HNRNPUQ00839 825 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 IKZF1Q13422 519 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 TTLL4Q14679 1199 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 PWP2Q15269 919 aaKnown RBP5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 USPL1Q5W0Q7 1092 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 SLC23A3Q6PIS1 610 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 MPZL3Q6UWV2 235 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 NOL8Q76FK4 1167 aaKnown RBP5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 GJD3Q8N144 294 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 TOP6BLQ8N6T0 577 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 CRIM1Q9NZV1 1036 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 RIPOR2Q9Y4F9 1068 aa5.11□□□□□ -1.59
HMGB1P12-201ENST00000438594 TCF3P15923 654 aa5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 CFPP27918 469 aa5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 OXCT1P55809 520 aa5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 ZNF211Q13398 564 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 LRRC56Q8IYG6 542 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 CCER1Q8TC90 406 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 LIN37Q96GY3 246 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 DUSP23Q9BVJ7 150 aa5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 HIRIP3Q9BW71 556 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 PCOLCE2Q9UKZ9 415 aa5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 PLAGL2Q9UPG8 496 aa5.1□□□□□ -1.59
HMGB1P12-201ENST00000438594 PLEKHD1A6NEE1 506 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 MARCH6O60337 910 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 NPR3P17342 541 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 FKBP4Q02790 459 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 ZP2Q05996 745 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 SF3B2Q13435 895 aaKnown RBP5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 LILRA6Q6PI73 481 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 SYDE1Q6ZW31 735 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 ANKLE2Q86XL3 938 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 FLAD1Q8NFF5 587 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 KCNB2Q92953 911 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 PPP1R16BQ96T49 567 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 NPHS2Q9NP85 383 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 DISC1Q9NRI5 854 aa5.09□□□□□ -1.59
HMGB1P12-201ENST00000438594 ZNF503-AS2A6NEH8 195 aa5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 ZNF862O60290 1169 aa5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 GADD45BO75293 160 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 ZSCAN22P10073 491 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P12-201ENST00000438594 SSFA2P28290 1259 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms