RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ARMT1Q9H993 441 aa7.59□□□□□ -1.2
CSDE1-205ENST00000438362 EXOC1Q9NV70 894 aa7.59□□□□□ -1.2
CSDE1-205ENST00000438362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.59□□□□□ -1.21e-11■■□□□ 14.1
CSDE1-205ENST00000438362 GUCA1BQ9UMX6 200 aa7.59□□□□□ -1.2
CSDE1-205ENST00000438362 KRT86O43790 486 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 IGKV5-2P06315 115 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 IVLP07476 585 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 CAPN2P17655 700 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 USP8P40818 1118 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 GNAQP50148 359 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 KRT83P78385 493 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 UBXN1Q04323 297 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 ANKRD18AQ8IVF6 992 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 STX8Q9UNK0 236 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 LUC7L2Q9Y383 392 aaKnown RBP7.58□□□□□ -1.2
CSDE1-205ENST00000438362 CPS1P31327 1500 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 CCT6AP40227 531 aaKnown RBP7.58□□□□□ -1.2
CSDE1-205ENST00000438362 DNA2P51530 1060 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 CHMP4BP1P59074 171 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 SLC39A14Q15043 492 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 ZNF174Q15697 407 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 ODF2Q5BJF6 829 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 SARM1Q6SZW1 724 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 TRMT44Q8IYL2 757 aaKnown RBP7.58□□□□□ -1.2
CSDE1-205ENST00000438362 FBXO3Q9UK99 471 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 KCNJ14Q9UNX9 436 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 DEPDC5O75140 1603 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 USP32Q8NFA0 1604 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 USP42Q9H9J4 1324 aaKnown RBP7.58□□□□□ -1.2
CSDE1-205ENST00000438362 TUBB2AQ13885 445 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 CCDC178Q5BJE1 867 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 EPHA10Q5JZY3 1008 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 UTP14CQ5TAP6 766 aaKnown RBP7.58□□□□□ -1.2
CSDE1-205ENST00000438362 HDXQ7Z353 690 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 TUBB2BQ9BVA1 445 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 FAM107BQ9H098 131 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 FANCLQ9NW38 375 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 VPS18Q9P253 973 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 TTF2Q9UNY4 1162 aaKnown RBP7.58□□□□□ -1.2
CSDE1-205ENST00000438362 ZMYM6O95789 1325 aa7.58□□□□□ -1.2
CSDE1-205ENST00000438362 PDE8AO60658 829 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 MCM7P33993 719 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 MATR3P43243 847 aaKnown RBP eCLIP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 NOSTRINQ8IVI9 506 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 LPIN2Q92539 896 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 RBM28Q9NW13 759 aaKnown RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 SERTAD1Q9UHV2 236 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 SYNRGQ9UMZ2 1314 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 PIK3C2BO00750 1634 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 WDHD1O75717 1129 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 LDHCP07864 332 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 ADKP55263 362 aaKnown RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 CTDSPL2Q05D32 466 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 KIF5AQ12840 1032 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 ENOX2Q16206 610 aaKnown RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 CCDC96Q2M329 555 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 SLC4A8Q2Y0W8 1093 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 AKNAD1Q5T1N1 836 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 KRBA2Q6ZNG9 492 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 DNAJC10Q8IXB1 793 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 PPP1R13BQ96KQ4 1090 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 NAA15Q9BXJ9 866 aaKnown RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 PUS3Q9BZE2 481 aaKnown RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 VPS16Q9H269 839 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 ANKIB1Q9P2G1 1089 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 ZNF219Q9P2Y4 722 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 NIP7Q9Y221 180 aaKnown RBP eCLIP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 MROH2AA6NES4 1674 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 OVOS2A0A0J9YW53 1432 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 OVOS2Q6IE36 1432 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 IKBKBO14920 756 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 PHACTR2O75167 634 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 BAG3O95817 575 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 ASIC1P78348 528 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 PPP2R5BQ15173 497 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 CCDC40Q4G0X9 1142 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 SPTY2D1Q68D10 685 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 PLA2G4DQ86XP0 818 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 NAPGQ99747 312 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 ALDH8A1Q9H2A2 487 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 VAT1LQ9HCJ6 419 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 PCDHA5Q9Y5H7 936 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 V9GY48 417 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-205ENST00000438362 CDC42BPGQ6DT37 1551 aa7.57□□□□□ -1.2
CSDE1-205ENST00000438362 ERVV-2B6SEH9 535 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 TACC1O75410 805 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 CIAO1O76071 339 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 ATXN8OSP0DMR3 200 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 TRIM14Q14142 442 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 TSGA10IPQ3SY00 556 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 WWC2Q6AWC2 1192 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 DTHD1Q6ZMT9 781 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 TMTC1Q8IUR5 882 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 GPR161Q8N6U8 529 aaKnown RBP7.56□□□□□ -1.2
CSDE1-205ENST00000438362 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 CCDC42Q96M95 316 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 CLIC6Q96NY7 704 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 CTNND2Q9UQB3 1225 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 PPP2R2CQ9Y2T4 447 aa7.56□□□□□ -1.2
CSDE1-205ENST00000438362 ANKARQ7Z5J8 1434 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms