RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 PRPHP41219 470 aa11.6□□□□□ -0.55
SHPRH-206ENST00000438092 CMTR1Q8N1G2 835 aaKnown RBP11.6□□□□□ -0.55
SHPRH-206ENST00000438092 RSPH14Q9UHP6 348 aa11.6□□□□□ -0.55
SHPRH-206ENST00000438092 SPOPO43791 374 aa11.6□□□□□ -0.55
SHPRH-206ENST00000438092 SMTNP53814 917 aa11.6□□□□□ -0.55
SHPRH-206ENST00000438092 HDAC1Q13547 482 aaPredicted RBP11.6□□□□□ -0.55
SHPRH-206ENST00000438092 NIM1KQ8IY84 436 aa11.6□□□□□ -0.55
SHPRH-206ENST00000438092 LMBR1Q8WVP7 490 aa11.6□□□□□ -0.55
SHPRH-206ENST00000438092 TCP10L2B9ZVM9 353 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 GADL1Q6ZQY3 521 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 FAM227BQ96M60 508 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 ZWINTO95229 277 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 SCNN1DP51172 638 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 CCDC77Q9BR77 488 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 PLEKHA4Q9H4M7 779 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 URB2Q14146 1524 aaKnown RBP11.59□□□□□ -0.55
SHPRH-206ENST00000438092 FRMPD2Q68DX3 1309 aaPredicted RBP11.59□□□□□ -0.55
SHPRH-206ENST00000438092 KRT86O43790 486 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 SLC1A4P43007 532 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 GTF2IP78347 998 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 IRX3P78415 501 aaPredicted RBP11.59□□□□□ -0.55
SHPRH-206ENST00000438092 STAMQ92783 540 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 POLR2DO15514 142 aaKnown RBP11.59□□□□□ -0.55
SHPRH-206ENST00000438092 BEND3Q5T5X7 828 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 NELFCDQ8IXH7 590 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 PDE8AO60658 829 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 SLC8A3P57103 927 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 BRDTQ58F21 947 aaPredicted RBP11.59□□□□□ -0.55
SHPRH-206ENST00000438092 MAP3K19Q56UN5 1328 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 TNFAIP3P21580 790 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 LRMPQ12912 555 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 MYCT1Q8N699 235 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 CCT6BQ92526 530 aa11.59□□□□□ -0.55
SHPRH-206ENST00000438092 GPAA1O43292 621 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 GCNT3O95395 438 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 KRT83P78385 493 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 SPAG1Q07617 926 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 OTUD7AQ8TE49 926 aaPredicted RBP11.58□□□□□ -0.56
SHPRH-206ENST00000438092 IP6K1Q92551 441 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 ZBED4O75132 1171 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 VAMP4O75379 141 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 TCIRG1Q13488 830 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 SYT10Q6XYQ8 523 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 GOLGA1Q92805 767 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 TRIM31Q9BZY9 425 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 TNNI3KQ59H18 835 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 SEL1L2Q5TEA6 688 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 IQUBQ8NA54 791 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 PSMB7Q99436 277 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 ARFGAP3Q9NP61 516 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 FPGT-TNNI3KV9GXZ4 949 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 SETD1BQ9UPS6 1966 aaKnown RBP11.58□□□□□ -0.56
SHPRH-206ENST00000438092 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 A2MP01023 1474 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 KLHL40Q2TBA0 621 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 PKNOX2Q96KN3 472 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 SEC62Q99442 399 aaKnown RBP11.58□□□□□ -0.56
SHPRH-206ENST00000438092 AZI2Q9H6S1 392 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 SH3TC1Q8TE82 1336 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 DNAJC10Q8IXB1 793 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 GTPBP4Q9BZE4 634 aaKnown RBP11.58□□□□□ -0.56
SHPRH-206ENST00000438092 FAM204AQ9H8W3 233 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 YTHDC2Q9H6S0 1430 aaKnown RBP11.58□□□□□ -0.56
SHPRH-206ENST00000438092 ABCA10Q8WWZ4 1543 aa11.58□□□□□ -0.56
SHPRH-206ENST00000438092 EIF4G3O43432 1585 aaKnown RBP11.57□□□□□ -0.56
SHPRH-206ENST00000438092 DDX12PQ92771 950 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 NSRP1Q9H0G5 558 aaKnown RBP11.57□□□□□ -0.56
SHPRH-206ENST00000438092 TMCO4Q5TGY1 634 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 FAM173BQ6P4H8 233 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 FAM200AQ8TCP9 573 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 KCNJ14Q9UNX9 436 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 TTC41PQ6P2S7 1318 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 CHMLP26374 656 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 INF2Q27J81 1249 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 CCDC14Q49A88 953 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 FAM182BQ5T319 152 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 PLBD2Q8NHP8 589 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 CCDC87Q9NVE4 849 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 LUC7L2Q9Y383 392 aaKnown RBP11.57□□□□□ -0.56
SHPRH-206ENST00000438092 PAXBP1Q9Y5B6 917 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 RPL13P26373 211 aaKnown RBP11.57□□□□□ -0.56
SHPRH-206ENST00000438092 DLGAP5Q15398 846 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 KMT5BQ4FZB7 885 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 ARHGAP45Q92619 1136 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 SMC6Q96SB8 1091 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.57□□□□□ -0.56
SHPRH-206ENST00000438092 RRP9O43818 475 aaKnown RBP11.57□□□□□ -0.56
SHPRH-206ENST00000438092 SLU7O95391 586 aaKnown RBP11.57□□□□□ -0.56
SHPRH-206ENST00000438092 HSPA4P34932 840 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 NOLC1Q14978 699 aaKnown RBP eCLIP11.57□□□□□ -0.56
SHPRH-206ENST00000438092 KIFAP3Q92845 792 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 RALGAPBQ86X10 1494 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 TESPA1A2RU30 521 aaPredicted RBP11.57□□□□□ -0.56
SHPRH-206ENST00000438092 M0QZ92 97 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 CCDC122Q5T0U0 273 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 TPH2Q8IWU9 490 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 VPS18Q9P253 973 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 MYO1AQ9UBC5 1043 aa11.57□□□□□ -0.56
SHPRH-206ENST00000438092 H7C1D1 291 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 UVSSAQ2YD98 709 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms