RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 RANBP6O60518 1105 aaKnown RBP19.26■□□□□ 0.67
TTC3-209ENST00000438055 ADAMTS2O95450 1211 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 RBM6P78332 1123 aaKnown RBP19.26■□□□□ 0.67
TTC3-209ENST00000438055 LCORLQ8N3X6 602 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 UTP14AQ9BVJ6 771 aaKnown RBP19.26■□□□□ 0.67
TTC3-209ENST00000438055 LY9Q9HBG7 655 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 DCCP43146 1447 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 KRI1Q8N9T8 703 aaKnown RBP19.26■□□□□ 0.67
TTC3-209ENST00000438055 SDR42E1Q8WUS8 393 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 TMX1Q9H3N1 280 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 CNNM2Q9H8M5 875 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 ALS2Q96Q42 1657 aa19.26■□□□□ 0.67
TTC3-209ENST00000438055 GUCY1A2P33402 732 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 ZNF827Q17R98 1081 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 LONRF3Q496Y0 759 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 SLC4A9Q96Q91 983 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.25■□□□□ 0.67
TTC3-209ENST00000438055 ZHX1Q9UKY1 873 aaPredicted RBP19.25■□□□□ 0.67
TTC3-209ENST00000438055 PCDHA5Q9Y5H7 936 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 MROH5Q6ZUA9 1318 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 PRDM1O75626 825 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 SUSD4Q5VX71 490 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 KLHL10Q6JEL2 608 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 FBXL16Q8N461 479 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 EPB41L4AQ9HCS5 686 aaPredicted RBP19.25■□□□□ 0.67
TTC3-209ENST00000438055 UBN2Q6ZU65 1347 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 CBFA2T2O43439 604 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 IGDCC4Q8TDY8 1250 aa19.25■□□□□ 0.67
TTC3-209ENST00000438055 POLR2DO15514 142 aaKnown RBP19.24■□□□□ 0.67
TTC3-209ENST00000438055 NR5A1Q13285 461 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 CCDC152Q4G0S7 254 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 SOS2Q07890 1332 aaPredicted RBP19.24■□□□□ 0.67
TTC3-209ENST00000438055 FOXN1O15353 648 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 NOSTRINQ8IVI9 506 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 CABP5Q9NP86 173 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 FANCLQ9NW38 375 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 RIC1Q4ADV7 1423 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 ADAMTS7Q9UKP4 1686 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 SLC4A8Q2Y0W8 1093 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 NBPF11Q86T75 865 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 IMPACTQ9P2X3 320 aa19.24■□□□□ 0.67
TTC3-209ENST00000438055 ELF2Q15723 593 aa19.23■□□□□ 0.67
TTC3-209ENST00000438055 ARMCX5Q6P1M9 558 aa19.23■□□□□ 0.67
TTC3-209ENST00000438055 TRMT44Q8IYL2 757 aaKnown RBP19.23■□□□□ 0.67
TTC3-209ENST00000438055 CGNQ9P2M7 1197 aaKnown RBP19.23■□□□□ 0.67
TTC3-209ENST00000438055 DNAI1Q9UI46 699 aa19.23■□□□□ 0.67
TTC3-209ENST00000438055 CTIFO43310 598 aaKnown RBP19.23■□□□□ 0.67
TTC3-209ENST00000438055 CUTAO60888 179 aa19.23■□□□□ 0.67
TTC3-209ENST00000438055 CCDC196A0A1B0GTZ2 297 aa19.23■□□□□ 0.67
TTC3-209ENST00000438055 GRAMD1CQ8IYS0 662 aa19.23■□□□□ 0.67
TTC3-209ENST00000438055 MTMR7Q9Y216 660 aa19.22■□□□□ 0.67
TTC3-209ENST00000438055 AFMP43652 599 aa19.22■□□□□ 0.67
TTC3-209ENST00000438055 KRBA2Q6ZNG9 492 aa19.22■□□□□ 0.67
TTC3-209ENST00000438055 VGLL2Q8N8G2 317 aa19.22■□□□□ 0.67
TTC3-209ENST00000438055 RNF41Q9H4P4 317 aaPredicted RBP19.22■□□□□ 0.67
TTC3-209ENST00000438055 WDR19Q8NEZ3 1342 aa19.22■□□□□ 0.67
TTC3-209ENST00000438055 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
TTC3-209ENST00000438055 GSG1L2A8MUP6 293 aa19.21■□□□□ 0.67
TTC3-209ENST00000438055 KIF2AO00139 706 aaPredicted RBP19.21■□□□□ 0.67
TTC3-209ENST00000438055 PPP6R2O75170 966 aa19.21■□□□□ 0.67
TTC3-209ENST00000438055 ARID4AP29374 1257 aaPredicted RBP19.21■□□□□ 0.67
TTC3-209ENST00000438055 IL6STP40189 918 aaPredicted RBP19.21■□□□□ 0.67
TTC3-209ENST00000438055 DPF2Q92785 391 aa19.21■□□□□ 0.67
TTC3-209ENST00000438055 SMARCE1Q969G3 411 aa19.21■□□□□ 0.67
TTC3-209ENST00000438055 KCPQ6ZWJ8 1503 aa19.21■□□□□ 0.67
TTC3-209ENST00000438055 SLU7O95391 586 aaKnown RBP19.21■□□□□ 0.67
TTC3-209ENST00000438055 XBP1P17861 261 aa19.21■□□□□ 0.67
TTC3-209ENST00000438055 URI1O94763 535 aaPredicted RBP19.21■□□□□ 0.67
TTC3-209ENST00000438055 GYG1P46976 350 aa19.21■□□□□ 0.67
TTC3-209ENST00000438055 SMAP1Q8IYB5 467 aaPredicted RBP19.21■□□□□ 0.67
TTC3-209ENST00000438055 MNS1Q8NEH6 495 aa19.21■□□□□ 0.67
TTC3-209ENST00000438055 CCDC34Q96HJ3 373 aa19.21■□□□□ 0.67
TTC3-209ENST00000438055 SERTAD1Q9UHV2 236 aa19.21■□□□□ 0.67
TTC3-209ENST00000438055 ANKRD7Q92527 254 aa19.2■□□□□ 0.66
TTC3-209ENST00000438055 PPP1R13BQ96KQ4 1090 aa19.2■□□□□ 0.66
TTC3-209ENST00000438055 OSBPL5Q9H0X9 879 aaPredicted RBP19.2■□□□□ 0.66
TTC3-209ENST00000438055 DHX58Q96C10 678 aa19.2■□□□□ 0.66
TTC3-209ENST00000438055 GNL3LQ9NVN8 582 aaKnown RBP19.2■□□□□ 0.66
TTC3-209ENST00000438055 LIFRP42702 1097 aa19.2■□□□□ 0.66
TTC3-209ENST00000438055 GRIN1Q05586 938 aa19.2■□□□□ 0.66
TTC3-209ENST00000438055 E4F1Q66K89 784 aaPredicted RBP19.2■□□□□ 0.66
TTC3-209ENST00000438055 ZNF654Q8IZM8 581 aa19.2■□□□□ 0.66
TTC3-209ENST00000438055 VPS54Q9P1Q0 977 aa19.2■□□□□ 0.66
TTC3-209ENST00000438055 FMNL1O95466 1100 aaPredicted RBP19.19■□□□□ 0.66
TTC3-209ENST00000438055 ADAMTSL3P82987 1691 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 PCDHB6Q9Y5E3 794 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 TMEM232C9JQI7 657 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 IFNAR1P17181 557 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 CHRNDQ07001 517 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 NCAPHQ15003 741 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 PTPAQ15257 358 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 NTRK3Q16288 839 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 RESP18Q5W5W9 173 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 METTL16Q86W50 562 aaKnown RBP19.19■□□□□ 0.66
TTC3-209ENST00000438055 ESR2Q92731 530 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 CCDC87Q9NVE4 849 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 CYP2D7A0A087X1C5 515 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 MAGEB6P1A0A0J9YX57 407 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 TCRBV5S4A2TA0A5A2 114 aa19.19■□□□□ 0.66
TTC3-209ENST00000438055 STX17P56962 302 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms