RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 FKBP1CQ5VVH2 108 aa9.65□□□□□ -0.86
VPS50-203ENST00000436177 FAM83AQ86UY5 434 aa9.65□□□□□ -0.86
VPS50-203ENST00000436177 VGLL2Q8N8G2 317 aa9.65□□□□□ -0.86
VPS50-203ENST00000436177 CD99L2Q8TCZ2 262 aa9.65□□□□□ -0.86
VPS50-203ENST00000436177 A0A1B0GUL6 1792 aa9.65□□□□□ -0.87
VPS50-203ENST00000436177 SPDYE5A6NIY4 337 aa9.64□□□□□ -0.87
VPS50-203ENST00000436177 LDHBP07195 334 aaKnown RBP9.64□□□□□ -0.87
VPS50-203ENST00000436177 HHIPL2Q6UWX4 724 aa9.64□□□□□ -0.87
VPS50-203ENST00000436177 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.64□□□□□ -0.87
VPS50-203ENST00000436177 ERO1BQ86YB8 467 aa9.64□□□□□ -0.87
VPS50-203ENST00000436177 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS50-203ENST00000436177 BRI3BPQ8WY22 251 aa9.64□□□□□ -0.87
VPS50-203ENST00000436177 TEPSINQ96N21 525 aa9.64□□□□□ -0.87
VPS50-203ENST00000436177 MRIQ9BWK5 157 aa9.64□□□□□ -0.87
VPS50-203ENST00000436177 ZNF341Q9BYN7 854 aa9.64□□□□□ -0.87
VPS50-203ENST00000436177 RPAP1Q9BWH6 1393 aaPredicted RBP9.63□□□□□ -0.87
VPS50-203ENST00000436177 TESPA1A2RU30 521 aaPredicted RBP9.63□□□□□ -0.87
VPS50-203ENST00000436177 SEMA3EO15041 775 aa9.63□□□□□ -0.87
VPS50-203ENST00000436177 CIAO1O76071 339 aa9.63□□□□□ -0.87
VPS50-203ENST00000436177 NUDT7P0C024 238 aa9.63□□□□□ -0.87
VPS50-203ENST00000436177 FGFR2P21802 821 aa9.63□□□□□ -0.87
VPS50-203ENST00000436177 IL15P40933 162 aaPredicted RBP9.63□□□□□ -0.87
VPS50-203ENST00000436177 GRIK5Q16478 980 aa9.63□□□□□ -0.87
VPS50-203ENST00000436177 SLC9C1Q4G0N8 1177 aa9.63□□□□□ -0.87
VPS50-203ENST00000436177 NBPF11Q86T75 865 aa9.63□□□□□ -0.87
VPS50-203ENST00000436177 DZIP1Q86YF9 867 aaKnown RBP9.63□□□□□ -0.87
VPS50-203ENST00000436177 ZGPATQ8N5A5 531 aaKnown RBP9.63□□□□□ -0.87
VPS50-203ENST00000436177 DENND2AQ9ULE3 1009 aa9.63□□□□□ -0.87
VPS50-203ENST00000436177 PTPN22Q9Y2R2 807 aa9.63□□□□□ -0.87
VPS50-203ENST00000436177 LRRFIP2Q9Y608 721 aaKnown RBP9.63□□□□□ -0.87
VPS50-203ENST00000436177 ECM29Q5VYK3 1845 aa9.63□□□□□ -0.87
VPS50-203ENST00000436177 ARAP2Q8WZ64 1704 aa9.62□□□□□ -0.87
VPS50-203ENST00000436177 TCP10Q12799 353 aa9.62□□□□□ -0.87
VPS50-203ENST00000436177 PPIL2Q13356 520 aa9.62□□□□□ -0.87
VPS50-203ENST00000436177 DIXDC1Q155Q3 683 aa9.62□□□□□ -0.87
VPS50-203ENST00000436177 APOBEC3HQ6NTF7 200 aaKnown RBP9.62□□□□□ -0.87
VPS50-203ENST00000436177 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
VPS50-203ENST00000436177 ZKSCAN4Q969J2 545 aaPredicted RBP9.62□□□□□ -0.87
VPS50-203ENST00000436177 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
VPS50-203ENST00000436177 PTPN18Q99952 460 aa9.62□□□□□ -0.87
VPS50-203ENST00000436177 ZCCHC17Q9NP64 241 aaKnown RBP9.62□□□□□ -0.87
VPS50-203ENST00000436177 NOB1Q9ULX3 412 aaKnown RBP9.62□□□□□ -0.87
VPS50-203ENST00000436177 SNCAIPQ9Y6H5 919 aa9.62□□□□□ -0.87
VPS50-203ENST00000436177 GNAI3P08754 354 aa9.61□□□□□ -0.87
VPS50-203ENST00000436177 PRDX5P30044 214 aa9.61□□□□□ -0.87
VPS50-203ENST00000436177 RFX5P48382 616 aaPredicted RBP9.61□□□□□ -0.87
VPS50-203ENST00000436177 SLC4A8Q2Y0W8 1093 aa9.61□□□□□ -0.87
VPS50-203ENST00000436177 GORABQ5T7V8 394 aa9.61□□□□□ -0.87
VPS50-203ENST00000436177 MIGA2Q7L4E1 593 aa9.61□□□□□ -0.87
VPS50-203ENST00000436177 ZSCAN29Q8IWY8 852 aaPredicted RBP9.61□□□□□ -0.87
VPS50-203ENST00000436177 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
VPS50-203ENST00000436177 FAM151AQ8WW52 585 aa9.61□□□□□ -0.87
VPS50-203ENST00000436177 GCC1Q96CN9 775 aa9.61□□□□□ -0.87
VPS50-203ENST00000436177 PICK1Q9NRD5 415 aa9.61□□□□□ -0.87
VPS50-203ENST00000436177 DAGLAQ9Y4D2 1042 aa9.61□□□□□ -0.87
VPS50-203ENST00000436177 TNRC18O15417 2968 aaPredicted RBP9.6□□□□□ -0.87
VPS50-203ENST00000436177 IRF6O14896 467 aa9.6□□□□□ -0.87
VPS50-203ENST00000436177 IPO8O15397 1037 aaKnown RBP9.6□□□□□ -0.87
VPS50-203ENST00000436177 PHKA1P46020 1223 aa9.6□□□□□ -0.87
VPS50-203ENST00000436177 PPATQ06203 517 aa9.6□□□□□ -0.87
VPS50-203ENST00000436177 MVPQ14764 893 aaKnown RBP9.6□□□□□ -0.87
VPS50-203ENST00000436177 SPTY2D1Q68D10 685 aaPredicted RBP9.6□□□□□ -0.87
VPS50-203ENST00000436177 CDC42EP5Q6NZY7 148 aa9.6□□□□□ -0.87
VPS50-203ENST00000436177 ATG9AQ7Z3C6 839 aa9.6□□□□□ -0.87
VPS50-203ENST00000436177 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.6□□□□□ -0.87
VPS50-203ENST00000436177 ARMC5Q96C12 935 aa9.6□□□□□ -0.87
VPS50-203ENST00000436177 USP40Q9NVE5 1235 aa9.6□□□□□ -0.87
VPS50-203ENST00000436177 ABCF2Q9UG63 623 aa9.6□□□□□ -0.87
VPS50-203ENST00000436177 AKAP2Q9Y2D5 859 aa9.6□□□□□ -0.87
VPS50-203ENST00000436177 SALL1Q9NSC2 1324 aa9.59□□□□□ -0.87
VPS50-203ENST00000436177 KIAA0100Q14667 2235 aaKnown RBP9.59□□□□□ -0.87
VPS50-203ENST00000436177 BTBD19C9JJ37 291 aa9.59□□□□□ -0.87
VPS50-203ENST00000436177 SRGAP3O43295 1099 aa9.59□□□□□ -0.87
VPS50-203ENST00000436177 TLR2O60603 784 aa9.59□□□□□ -0.87
VPS50-203ENST00000436177 GNRH1P01148 92 aa9.59□□□□□ -0.87
VPS50-203ENST00000436177 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
VPS50-203ENST00000436177 PARK7Q99497 189 aaKnown RBP9.59□□□□□ -0.87
VPS50-203ENST00000436177 MEIS3Q99687 375 aa9.59□□□□□ -0.87
VPS50-203ENST00000436177 PA2G4Q9UQ80 394 aaKnown RBP9.59□□□□□ -0.87
VPS50-203ENST00000436177 PTCH2Q9Y6C5 1203 aa9.59□□□□□ -0.87
VPS50-203ENST00000436177 HTTP42858 3142 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 OTOFQ9HC10 1997 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 CCER2I3L3R5 266 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 PDHXO00330 501 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 MYCP01106 439 aaPredicted RBP9.58□□□□□ -0.88
VPS50-203ENST00000436177 HOXD10P28358 340 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 INPP5BP32019 993 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 RARSP54136 660 aaKnown RBP9.58□□□□□ -0.88
VPS50-203ENST00000436177 PRMT2P55345 433 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 LACTBP83111 547 aaPredicted RBP9.58□□□□□ -0.88
VPS50-203ENST00000436177 LSM11P83369 360 aaKnown RBP eCLIP9.58□□□□□ -0.88
VPS50-203ENST00000436177 NFIAQ12857 509 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 RASGRF1Q13972 1273 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 CCDC102BQ68D86 513 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 ANKRD23Q86SG2 305 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 FRAT1Q92837 279 aaPredicted RBP9.58□□□□□ -0.88
VPS50-203ENST00000436177 COPRSQ9NQ92 184 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 LHX6Q9UPM6 363 aa9.58□□□□□ -0.88
VPS50-203ENST00000436177 PDS5AQ29RF7 1337 aaKnown RBP9.57□□□□□ -0.88
VPS50-203ENST00000436177 ENTPD3O75355 529 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms