RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 RNF208Q9H0X6 261 aa16.95■□□□□ 0.3
LINC00028-201ENST00000435497 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
LINC00028-201ENST00000435497 DENND2AQ9ULE3 1009 aa16.95■□□□□ 0.3
LINC00028-201ENST00000435497 PA2G4Q9UQ80 394 aaKnown RBP16.95■□□□□ 0.3
LINC00028-201ENST00000435497 AFG3L2Q9Y4W6 797 aa16.95■□□□□ 0.3
LINC00028-201ENST00000435497 GAKO14976 1311 aa16.95■□□□□ 0.3
LINC00028-201ENST00000435497 DDTLA6NHG4 134 aaPredicted RBP16.94■□□□□ 0.3
LINC00028-201ENST00000435497 SEMA3EO15041 775 aa16.94■□□□□ 0.3
LINC00028-201ENST00000435497 ENTPD3O75355 529 aa16.94■□□□□ 0.3
LINC00028-201ENST00000435497 ALDH1L2Q3SY69 923 aa16.94■□□□□ 0.3
LINC00028-201ENST00000435497 SCYL3Q8IZE3 742 aa16.94■□□□□ 0.3
LINC00028-201ENST00000435497 DDX4Q9NQI0 724 aaKnown RBP16.94■□□□□ 0.3
LINC00028-201ENST00000435497 RBM27Q9P2N5 1060 aaKnown RBP16.94■□□□□ 0.3
LINC00028-201ENST00000435497 BIN2Q9UBW5 565 aaPredicted RBP16.94■□□□□ 0.3
LINC00028-201ENST00000435497 RFX7Q2KHR2 1363 aa16.93■□□□□ 0.3
LINC00028-201ENST00000435497 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
LINC00028-201ENST00000435497 IL15P40933 162 aaPredicted RBP16.93■□□□□ 0.3
LINC00028-201ENST00000435497 FCGRTP55899 365 aa16.93■□□□□ 0.3
LINC00028-201ENST00000435497 CCDC102BQ68D86 513 aa16.93■□□□□ 0.3
LINC00028-201ENST00000435497 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
LINC00028-201ENST00000435497 CDCA7LQ96GN5 454 aa16.93■□□□□ 0.3
LINC00028-201ENST00000435497 UNC93B1Q9H1C4 597 aa16.93■□□□□ 0.3
LINC00028-201ENST00000435497 PTPRFP10586 1907 aa16.93■□□□□ 0.3
LINC00028-201ENST00000435497 PHIPQ8WWQ0 1821 aa16.92■□□□□ 0.3
LINC00028-201ENST00000435497 DOCK2Q92608 1830 aa16.92■□□□□ 0.3
LINC00028-201ENST00000435497 TIMM10P62072 90 aa16.92■□□□□ 0.3
LINC00028-201ENST00000435497 UBXN2AP68543 259 aa16.92■□□□□ 0.3
LINC00028-201ENST00000435497 GADL1Q6ZQY3 521 aa16.92■□□□□ 0.3
LINC00028-201ENST00000435497 U2AF1L4Q8WU68 220 aaKnown RBP16.92■□□□□ 0.3
LINC00028-201ENST00000435497 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
LINC00028-201ENST00000435497 PRO3102Q9H379 93 aa16.92■□□□□ 0.3
LINC00028-201ENST00000435497 COPRSQ9NQ92 184 aa16.92■□□□□ 0.3
LINC00028-201ENST00000435497 PICK1Q9NRD5 415 aa16.92■□□□□ 0.3
LINC00028-201ENST00000435497 SGPL1O95470 568 aa16.91■□□□□ 0.3
LINC00028-201ENST00000435497 FLT3LGP49771 235 aa16.91■□□□□ 0.3
LINC00028-201ENST00000435497 RASGRF1Q13972 1273 aa16.91■□□□□ 0.3
LINC00028-201ENST00000435497 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
LINC00028-201ENST00000435497 SLAIN1Q8ND83 568 aa16.91■□□□□ 0.3
LINC00028-201ENST00000435497 SMC4Q9NTJ3 1288 aa16.91■□□□□ 0.3
LINC00028-201ENST00000435497 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.91■□□□□ 0.3
LINC00028-201ENST00000435497 SLC45A1Q9Y2W3 748 aa16.91■□□□□ 0.3
LINC00028-201ENST00000435497 LRRFIP2Q9Y608 721 aaKnown RBP16.91■□□□□ 0.3
LINC00028-201ENST00000435497 ADCY3O60266 1144 aa16.9■□□□□ 0.3
LINC00028-201ENST00000435497 CTNND1O60716 968 aaKnown RBP16.9■□□□□ 0.3
LINC00028-201ENST00000435497 ELNP15502 786 aa16.9■□□□□ 0.3
LINC00028-201ENST00000435497 CCDC84Q86UT8 332 aaPredicted RBP16.9■□□□□ 0.3
LINC00028-201ENST00000435497 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
LINC00028-201ENST00000435497 ZGPATQ8N5A5 531 aaKnown RBP16.9■□□□□ 0.3
LINC00028-201ENST00000435497 ZNF384Q8TF68 577 aa16.9■□□□□ 0.3
LINC00028-201ENST00000435497 HTATIP2Q9BUP3 242 aa16.9■□□□□ 0.3
LINC00028-201ENST00000435497 ABCF2Q9UG63 623 aa16.9■□□□□ 0.3
LINC00028-201ENST00000435497 NOB1Q9ULX3 412 aaKnown RBP16.9■□□□□ 0.3
LINC00028-201ENST00000435497 BTDP43251 543 aa16.89■□□□□ 0.29
LINC00028-201ENST00000435497 RHBDL3P58872 404 aa16.89■□□□□ 0.29
LINC00028-201ENST00000435497 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.89■□□□□ 0.29
LINC00028-201ENST00000435497 TRIM75PA6NK02 468 aa16.88■□□□□ 0.29
LINC00028-201ENST00000435497 ZBTB7BO15156 539 aaPredicted RBP16.88■□□□□ 0.29
LINC00028-201ENST00000435497 FARP2O94887 1054 aaPredicted RBP16.88■□□□□ 0.29
LINC00028-201ENST00000435497 PICALMQ13492 652 aa16.88■□□□□ 0.29
LINC00028-201ENST00000435497 IRF5Q13568 498 aa16.88■□□□□ 0.29
LINC00028-201ENST00000435497 DZIP1Q86YF9 867 aaKnown RBP16.88■□□□□ 0.29
LINC00028-201ENST00000435497 PXYLP1Q8TE99 480 aa16.88■□□□□ 0.29
LINC00028-201ENST00000435497 MEIS3Q99687 375 aa16.88■□□□□ 0.29
LINC00028-201ENST00000435497 PDS5AQ29RF7 1337 aaKnown RBP16.88■□□□□ 0.29
LINC00028-201ENST00000435497 DOCK1Q14185 1865 aa16.88■□□□□ 0.29
LINC00028-201ENST00000435497 GPR75-ASB3A0A0A6YYF3 556 aa16.87■□□□□ 0.29
LINC00028-201ENST00000435497 TBC1D12O60347 775 aa16.87■□□□□ 0.29
LINC00028-201ENST00000435497 INHAP05111 366 aa16.87■□□□□ 0.29
LINC00028-201ENST00000435497 MECOMQ03112 1051 aa16.87■□□□□ 0.29
LINC00028-201ENST00000435497 TREML2Q5T2D2 321 aa16.87■□□□□ 0.29
LINC00028-201ENST00000435497 XAGE2Q96GT9 111 aa16.87■□□□□ 0.29
LINC00028-201ENST00000435497 MROH7-TTC4A0A0A0MT08 1334 aa16.87■□□□□ 0.29
LINC00028-201ENST00000435497 A0A1B0GUL7 405 aa16.86■□□□□ 0.29
LINC00028-201ENST00000435497 FAM196BA6NMK8 535 aa16.86■□□□□ 0.29
LINC00028-201ENST00000435497 TNPO2O14787 897 aaKnown RBP16.86■□□□□ 0.29
LINC00028-201ENST00000435497 TFCP2Q12800 502 aa16.86■□□□□ 0.29
LINC00028-201ENST00000435497 SPTY2D1Q68D10 685 aaPredicted RBP16.86■□□□□ 0.29
LINC00028-201ENST00000435497 SLF2Q8IX21 1173 aa16.86■□□□□ 0.29
LINC00028-201ENST00000435497 ANKRD13CQ8N6S4 541 aa16.86■□□□□ 0.29
LINC00028-201ENST00000435497 DEFB118Q96PH6 123 aa16.86■□□□□ 0.29
LINC00028-201ENST00000435497 AGTPBP1Q9UPW5 1226 aa16.86■□□□□ 0.29
LINC00028-201ENST00000435497 NR2E3Q9Y5X4 410 aa16.86■□□□□ 0.29
LINC00028-201ENST00000435497 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
LINC00028-201ENST00000435497 TFRCP02786 760 aaKnown RBP16.85■□□□□ 0.29
LINC00028-201ENST00000435497 RRP1BQ14684 758 aaKnown RBP16.85■□□□□ 0.29
LINC00028-201ENST00000435497 ERICH6Q7L0X2 663 aa16.85■□□□□ 0.29
LINC00028-201ENST00000435497 SMCR8Q8TEV9 937 aaPredicted RBP16.85■□□□□ 0.29
LINC00028-201ENST00000435497 API5Q9BZZ5 524 aaKnown RBP16.85■□□□□ 0.29
LINC00028-201ENST00000435497 CRISPLD2Q9H0B8 497 aa16.85■□□□□ 0.29
LINC00028-201ENST00000435497 PAK6Q9NQU5 681 aaPredicted RBP16.85■□□□□ 0.29
LINC00028-201ENST00000435497 SPP2Q13103 211 aa16.84■□□□□ 0.29
LINC00028-201ENST00000435497 PI16Q6UXB8 463 aa16.84■□□□□ 0.29
LINC00028-201ENST00000435497 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC00028-201ENST00000435497 HMG20BQ9P0W2 317 aa16.84■□□□□ 0.29
LINC00028-201ENST00000435497 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
LINC00028-201ENST00000435497 LAMA3Q16787 3333 aa16.83■□□□□ 0.29
LINC00028-201ENST00000435497 FAM110CQ1W6H9 321 aa16.83■□□□□ 0.28
LINC00028-201ENST00000435497 TBC1D9Q6ZT07 1266 aa16.83■□□□□ 0.28
LINC00028-201ENST00000435497 PROCA1Q8NCQ7 364 aaPredicted RBP16.83■□□□□ 0.28
LINC00028-201ENST00000435497 COA7Q96BR5 231 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms