RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 EPAS1Q99814 870 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 NACA2Q9H009 215 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 CCDC61Q9Y6R9 512 aa8.31□□□□□ -1.08
GARNL3-205ENST00000435213 FRMD3A2A2Y4 597 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 EFCAB8A8MWE9 144 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 SASH3O75995 380 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 ROR2Q01974 943 aaKnown RBP8.3□□□□□ -1.08
GARNL3-205ENST00000435213 MPP3Q13368 585 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 GPR161Q8N6U8 529 aaKnown RBP8.3□□□□□ -1.08
GARNL3-205ENST00000435213 LSM14AQ8ND56 463 aaKnown RBP8.3□□□□□ -1.08
GARNL3-205ENST00000435213 TRIM5Q9C035 493 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 CD248Q9HCU0 757 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 USP31Q70CQ4 1352 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 ATP6V1G1O75348 118 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 SKAP2O75563 359 aaPredicted RBP8.3□□□□□ -1.08
GARNL3-205ENST00000435213 KRT38O76015 456 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 KIAA0754O94854 1291 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 GCLCP48506 637 aaPredicted RBP8.3□□□□□ -1.08
GARNL3-205ENST00000435213 TRPC1P48995 793 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 ISM2Q6H9L7 571 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 SARM1Q6SZW1 724 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 SYNE3Q6ZMZ3 975 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 CCDC170Q8IYT3 715 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 MYOCDQ8IZQ8 938 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 RHPN1Q8TCX5 695 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 BHMTQ93088 406 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 PHACTR1Q9C0D0 580 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 ATP8A1Q9Y2Q0 1164 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 GOLGA6L9A6NEM1 432 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 SLC8A1P32418 973 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 CCDC92Q53HC0 331 aaPredicted RBP8.3□□□□□ -1.08
GARNL3-205ENST00000435213 SEPT14Q6ZU15 432 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 CEP57Q86XR8 500 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 IL1RAPL2Q9NP60 686 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 KCND1Q9NSA2 647 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 DNAI1Q9UI46 699 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 IQSEC3Q9UPP2 1182 aaPredicted RBP8.3□□□□□ -1.08
GARNL3-205ENST00000435213 TMEM98Q9Y2Y6 226 aa8.3□□□□□ -1.08
GARNL3-205ENST00000435213 ARHGAP23Q9P227 1491 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 CEP104O60308 925 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 FERP16591 822 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 PAPOLAP51003 745 aaKnown RBP8.29□□□□□ -1.08
GARNL3-205ENST00000435213 ST3GAL1Q11201 340 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 MAGEC3Q8TD91 643 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 HDAC7Q8WUI4 952 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 JAKMIP1Q96N16 626 aaKnown RBP8.29□□□□□ -1.08
GARNL3-205ENST00000435213 SPDYE3A6NKU9 549 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 CAPN15O75808 1086 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 GLRX3O76003 335 aaKnown RBP8.29□□□□□ -1.08
GARNL3-205ENST00000435213 CYP11B2P19099 503 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 APOBRQ0VD83 1088 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 LARP1BQ659C4 914 aaKnown RBP8.29□□□□□ -1.08
GARNL3-205ENST00000435213 BRAPQ7Z569 592 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 FUT8Q9BYC5 575 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 USP44Q9H0E7 712 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 RABL2BQ9UNT1 228 aa8.29□□□□□ -1.08
GARNL3-205ENST00000435213 GOLGA6L4A6NEF3 574 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 ZNF189O75820 626 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 MAP3K9P80192 1104 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 DHX8Q14562 1220 aaKnown RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 THEMIS2Q5TEJ8 643 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 PARP9Q8IXQ6 854 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 CNNM3Q8NE01 707 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 FAM71BQ8TC56 605 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 TRPV5Q9NQA5 729 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 BABAM1Q9NWV8 329 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 DACT1Q9NYF0 836 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 MAP4K4O95819 1239 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 SNW1Q13573 536 aaKnown RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 ANKRD1Q15327 319 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 ME3Q16798 604 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 LONRF3Q496Y0 759 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 CCDC93Q567U6 631 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 SPATS2Q86XZ4 545 aaKnown RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 CACTIN-AS1Q8N1I8 211 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 STAG2Q8N3U4 1231 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 CACTINQ8WUQ7 758 aaKnown RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 HOOK2Q96ED9 719 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 ALDH8A1Q9H2A2 487 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 ANKIB1Q9P2G1 1089 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 NRBP1Q9UHY1 535 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 CEP170BQ9Y4F5 1589 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 ERICH2A1L162 156 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 H3BQF6 201 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 GIGYF1O75420 1035 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 SURF6O75683 361 aaKnown RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 VDRP11473 427 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 ZKSCAN1P17029 563 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 ZNF165P49910 485 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 SLC7A5Q01650 507 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 ATP2B2Q01814 1243 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 SLMAPQ14BN4 828 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 CAMK4Q16566 473 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 CCDC57Q2TAC2 916 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 HDXQ7Z353 690 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 CCDC65Q8IXS2 484 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 RBM41Q96IZ5 413 aaKnown RBP8.28□□□□□ -1.08
GARNL3-205ENST00000435213 SPATA32Q96LK8 384 aa8.28□□□□□ -1.08
GARNL3-205ENST00000435213 KLC4Q9NSK0 619 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms