RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 AFG3L2Q9Y4W6 797 aa19.95■□□□□ 0.78
NUP50-209ENST00000432340 MROH5Q6ZUA9 1318 aa19.95■□□□□ 0.78
NUP50-209ENST00000432340 SLC4A2P04920 1241 aa19.94■□□□□ 0.78
NUP50-209ENST00000432340 PTPRAP18433 802 aa19.94■□□□□ 0.78
NUP50-209ENST00000432340 TCP10Q12799 353 aa19.94■□□□□ 0.78
NUP50-209ENST00000432340 FKBP5Q13451 457 aaPredicted RBP19.94■□□□□ 0.78
NUP50-209ENST00000432340 LRRFIP2Q9Y608 721 aaKnown RBP19.94■□□□□ 0.78
NUP50-209ENST00000432340 TMEM265A0A087WTH1 108 aa19.93■□□□□ 0.78
NUP50-209ENST00000432340 PRKAR2AP13861 404 aaKnown RBP19.93■□□□□ 0.78
NUP50-209ENST00000432340 SOCS4Q8WXH5 440 aa19.93■□□□□ 0.78
NUP50-209ENST00000432340 XRCC5P13010 732 aaKnown RBP19.92■□□□□ 0.78
NUP50-209ENST00000432340 ZEB1P37275 1124 aaPredicted RBP19.92■□□□□ 0.78
NUP50-209ENST00000432340 SMAD3P84022 425 aaKnown RBP19.92■□□□□ 0.78
NUP50-209ENST00000432340 FLIIQ13045 1269 aa19.92■□□□□ 0.78
NUP50-209ENST00000432340 GRIK5Q16478 980 aa19.92■□□□□ 0.78
NUP50-209ENST00000432340 LRRC26Q2I0M4 334 aa19.92■□□□□ 0.78
NUP50-209ENST00000432340 MAP3K21Q5TCX8 1036 aa19.92■□□□□ 0.78
NUP50-209ENST00000432340 PROCA1Q8NCQ7 364 aaPredicted RBP19.92■□□□□ 0.78
NUP50-209ENST00000432340 ZNF594Q96JF6 807 aaPredicted RBP19.92■□□□□ 0.78
NUP50-209ENST00000432340 VCANP13611 3396 aa19.92■□□□□ 0.78
NUP50-209ENST00000432340 CTNND1O60716 968 aaKnown RBP19.91■□□□□ 0.78
NUP50-209ENST00000432340 WDR66Q8TBY9 1149 aa19.91■□□□□ 0.78
NUP50-209ENST00000432340 MYLIPQ8WY64 445 aa19.91■□□□□ 0.78
NUP50-209ENST00000432340 SPINK5Q9NQ38 1064 aaPredicted RBP19.91■□□□□ 0.78
NUP50-209ENST00000432340 GJD2Q9UKL4 321 aa19.91■□□□□ 0.78
NUP50-209ENST00000432340 IQSEC3Q9UPP2 1182 aaPredicted RBP19.91■□□□□ 0.78
NUP50-209ENST00000432340 TRIM75PA6NK02 468 aa19.9■□□□□ 0.78
NUP50-209ENST00000432340 NUDT12Q9BQG2 462 aa19.9■□□□□ 0.78
NUP50-209ENST00000432340 ZKSCAN1P17029 563 aaPredicted RBP19.89■□□□□ 0.77
NUP50-209ENST00000432340 PDE3AQ14432 1141 aa19.89■□□□□ 0.77
NUP50-209ENST00000432340 TSPYL6Q8N831 410 aa19.89■□□□□ 0.77
NUP50-209ENST00000432340 TRIB2Q92519 343 aa19.89■□□□□ 0.77
NUP50-209ENST00000432340 TBC1D2Q9BYX2 928 aa19.89■□□□□ 0.77
NUP50-209ENST00000432340 PHF20L1A8MW92 1017 aa19.88■□□□□ 0.77
NUP50-209ENST00000432340 CDC42EP5Q6NZY7 148 aa19.88■□□□□ 0.77
NUP50-209ENST00000432340 ADAMTS8Q9UP79 889 aa19.88■□□□□ 0.77
NUP50-209ENST00000432340 CYP2B6P20813 491 aa19.87■□□□□ 0.77
NUP50-209ENST00000432340 HOXD11P31277 338 aaPredicted RBP19.87■□□□□ 0.77
NUP50-209ENST00000432340 TRIM32Q13049 653 aa19.87■□□□□ 0.77
NUP50-209ENST00000432340 TWISTNBQ3B726 338 aaPredicted RBP19.87■□□□□ 0.77
NUP50-209ENST00000432340 G2E3Q7L622 706 aa19.87■□□□□ 0.77
NUP50-209ENST00000432340 ZSCAN29Q8IWY8 852 aaPredicted RBP19.87■□□□□ 0.77
NUP50-209ENST00000432340 ALPK3Q96L96 1907 aa19.86■□□□□ 0.77
NUP50-209ENST00000432340 KIF16BQ96L93 1317 aa19.86■□□□□ 0.77
NUP50-209ENST00000432340 MYBBP1AQ9BQG0 1328 aaKnown RBP19.86■□□□□ 0.77
NUP50-209ENST00000432340 ENTPD3O75355 529 aa19.86■□□□□ 0.77
NUP50-209ENST00000432340 NFIAQ12857 509 aa19.86■□□□□ 0.77
NUP50-209ENST00000432340 CCAR1Q8IX12 1150 aaKnown RBP19.86■□□□□ 0.77
NUP50-209ENST00000432340 USP40Q9NVE5 1235 aa19.86■□□□□ 0.77
NUP50-209ENST00000432340 DAGLAQ9Y4D2 1042 aa19.86■□□□□ 0.77
NUP50-209ENST00000432340 GRM8O00222 908 aa19.85■□□□□ 0.77
NUP50-209ENST00000432340 MSCO60682 206 aa19.85■□□□□ 0.77
NUP50-209ENST00000432340 IFIT1P09914 478 aaKnown RBP19.85■□□□□ 0.77
NUP50-209ENST00000432340 METTL24Q5JXM2 366 aa19.85■□□□□ 0.77
NUP50-209ENST00000432340 IL27Q8NEV9 243 aa19.85■□□□□ 0.77
NUP50-209ENST00000432340 ATXN2LQ8WWM7 1075 aaKnown RBP19.85■□□□□ 0.77
NUP50-209ENST00000432340 SENP6Q9GZR1 1112 aaPredicted RBP19.85■□□□□ 0.77
NUP50-209ENST00000432340 C9orf78Q9NZ63 289 aaPredicted RBP19.85■□□□□ 0.77
NUP50-209ENST00000432340 ARIH1Q9Y4X5 557 aaPredicted RBP19.85■□□□□ 0.77
NUP50-209ENST00000432340 MAP3K10Q02779 954 aa19.84■□□□□ 0.77
NUP50-209ENST00000432340 MAP3K12Q12852 859 aa19.84■□□□□ 0.77
NUP50-209ENST00000432340 MORF4L1Q9UBU8 362 aa19.84■□□□□ 0.77
NUP50-209ENST00000432340 FAM198AQ9UFP1 575 aa19.84■□□□□ 0.77
NUP50-209ENST00000432340 DDX60LQ5H9U9 1706 aaKnown RBP19.84■□□□□ 0.77
NUP50-209ENST00000432340 MGAMO43451 1857 aa19.84■□□□□ 0.77
NUP50-209ENST00000432340 APAF1O14727 1248 aa19.83■□□□□ 0.77
NUP50-209ENST00000432340 MAPK4P31152 587 aa19.83■□□□□ 0.77
NUP50-209ENST00000432340 RGS2P41220 211 aa19.83■□□□□ 0.77
NUP50-209ENST00000432340 SHHQ15465 462 aa19.83■□□□□ 0.77
NUP50-209ENST00000432340 TREML2Q5T2D2 321 aa19.83■□□□□ 0.77
NUP50-209ENST00000432340 LHX8Q68G74 356 aa19.83■□□□□ 0.77
NUP50-209ENST00000432340 C1QTNF1Q9BXJ1 281 aa19.83■□□□□ 0.77
NUP50-209ENST00000432340 TTYH1Q9H313 450 aaPredicted RBP19.83■□□□□ 0.77
NUP50-209ENST00000432340 PDE8BO95263 885 aa19.82■□□□□ 0.76
NUP50-209ENST00000432340 CACNB2Q08289 660 aaPredicted RBP19.82■□□□□ 0.76
NUP50-209ENST00000432340 IDI2Q9BXS1 227 aa19.82■□□□□ 0.76
NUP50-209ENST00000432340 IRX3P78415 501 aaPredicted RBP19.81■□□□□ 0.76
NUP50-209ENST00000432340 EPHA10Q5JZY3 1008 aa19.81■□□□□ 0.76
NUP50-209ENST00000432340 ZNF280CQ8ND82 737 aa19.81■□□□□ 0.76
NUP50-209ENST00000432340 GPRC5AQ8NFJ5 357 aa19.81■□□□□ 0.76
NUP50-209ENST00000432340 ASCC2Q9H1I8 757 aaPredicted RBP19.81■□□□□ 0.76
NUP50-209ENST00000432340 ATRNL1Q5VV63 1379 aa19.81■□□□□ 0.76
NUP50-209ENST00000432340 SPTBN5Q9NRC6 3674 aaKnown RBP19.8■□□□□ 0.76
NUP50-209ENST00000432340 LDHBP07195 334 aaKnown RBP19.8■□□□□ 0.76
NUP50-209ENST00000432340 RGS3P49796 1198 aa19.8■□□□□ 0.76
NUP50-209ENST00000432340 PUM3Q15397 648 aaKnown RBP19.8■□□□□ 0.76
NUP50-209ENST00000432340 BEND3Q5T5X7 828 aa19.8■□□□□ 0.76
NUP50-209ENST00000432340 MFSD14CQ5VZR4 134 aa19.8■□□□□ 0.76
NUP50-209ENST00000432340 GTF3C2Q8WUA4 911 aaPredicted RBP19.8■□□□□ 0.76
NUP50-209ENST00000432340 APBA2Q99767 749 aa19.8■□□□□ 0.76
NUP50-209ENST00000432340 PUS3Q9BZE2 481 aaKnown RBP19.8■□□□□ 0.76
NUP50-209ENST00000432340 RAPGEFL1Q9UHV5 662 aa19.8■□□□□ 0.76
NUP50-209ENST00000432340 DNM1LO00429 736 aa19.79■□□□□ 0.76
NUP50-209ENST00000432340 RTP1P59025 263 aa19.79■□□□□ 0.76
NUP50-209ENST00000432340 SPP2Q13103 211 aa19.79■□□□□ 0.76
NUP50-209ENST00000432340 DIXDC1Q155Q3 683 aa19.79■□□□□ 0.76
NUP50-209ENST00000432340 SLF2Q8IX21 1173 aa19.79■□□□□ 0.76
NUP50-209ENST00000432340 OSBPL5Q9H0X9 879 aaPredicted RBP19.79■□□□□ 0.76
NUP50-209ENST00000432340 AS3MTQ9HBK9 375 aa19.79■□□□□ 0.76
NUP50-209ENST00000432340 CWC22Q9HCG8 908 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms