RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 GNAI2P04899 355 aa17.62■□□□□ 0.41
SMARCE1-205ENST00000431889 ZHX2Q9Y6X8 837 aa17.62■□□□□ 0.41
SMARCE1-205ENST00000431889 GAKO14976 1311 aa17.62■□□□□ 0.41
SMARCE1-205ENST00000431889 ATRNL1Q5VV63 1379 aa17.62■□□□□ 0.41
SMARCE1-205ENST00000431889 MVPQ14764 893 aaKnown RBP17.62■□□□□ 0.41
SMARCE1-205ENST00000431889 SLC4A8Q2Y0W8 1093 aa17.62■□□□□ 0.41
SMARCE1-205ENST00000431889 ERICH6Q7L0X2 663 aa17.62■□□□□ 0.41
SMARCE1-205ENST00000431889 MIER1Q8N108 512 aa17.62■□□□□ 0.41
SMARCE1-205ENST00000431889 ZNF333Q96JL9 665 aa17.62■□□□□ 0.41
SMARCE1-205ENST00000431889 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
SMARCE1-205ENST00000431889 RBBP6Q7Z6E9 1792 aaKnown RBP17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 MROH7-TTC4A0A0A0MT08 1334 aa17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 IPO8O15397 1037 aaKnown RBP17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 KIF22Q14807 665 aa17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 GPAT2Q6NUI2 795 aa17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 C17orf99Q6UX52 265 aa17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 GADL1Q6ZQY3 521 aa17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 ZGPATQ8N5A5 531 aaKnown RBP17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 SPATA5Q8NB90 893 aa17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 RAI14Q9P0K7 980 aa17.61■□□□□ 0.41
SMARCE1-205ENST00000431889 MYO5AQ9Y4I1 1855 aaKnown RBP17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 RFX7Q2KHR2 1363 aa17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 MCAMP43121 646 aa17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 PSMC4P43686 418 aa17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 G3BP1Q13283 466 aaKnown RBP eCLIP17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 MTX1Q13505 466 aa17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 ANKRD23Q86SG2 305 aa17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 TRIM47Q96LD4 638 aa17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 TMEM106CQ9BVX2 250 aa17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 IDI2Q9BXS1 227 aa17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 KCNH4Q9UQ05 1017 aa17.6■□□□□ 0.41
SMARCE1-205ENST00000431889 PHIPQ8WWQ0 1821 aa17.59■□□□□ 0.41
SMARCE1-205ENST00000431889 TRIM75PA6NK02 468 aa17.59■□□□□ 0.41
SMARCE1-205ENST00000431889 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
SMARCE1-205ENST00000431889 PTPRAP18433 802 aa17.59■□□□□ 0.41
SMARCE1-205ENST00000431889 RHBDL3P58872 404 aa17.59■□□□□ 0.41
SMARCE1-205ENST00000431889 MTFR1Q15390 333 aa17.59■□□□□ 0.41
SMARCE1-205ENST00000431889 NOL9Q5SY16 702 aaKnown RBP17.59■□□□□ 0.41
SMARCE1-205ENST00000431889 SCYL3Q8IZE3 742 aa17.59■□□□□ 0.41
SMARCE1-205ENST00000431889 PICK1Q9NRD5 415 aa17.59■□□□□ 0.41
SMARCE1-205ENST00000431889 DOCK1Q14185 1865 aa17.59■□□□□ 0.41
SMARCE1-205ENST00000431889 ENTPD3O75355 529 aa17.58■□□□□ 0.41
SMARCE1-205ENST00000431889 SPTY2D1Q68D10 685 aaPredicted RBP17.58■□□□□ 0.41
SMARCE1-205ENST00000431889 NSUN4Q96CB9 384 aaKnown RBP17.58■□□□□ 0.41
SMARCE1-205ENST00000431889 PTPRFP10586 1907 aa17.58■□□□□ 0.4
SMARCE1-205ENST00000431889 OSBPP22059 807 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 OS9Q13438 667 aaPredicted RBP17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 NBPF11Q86T75 865 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 DBNDD2Q9BQY9 259 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 ADGRA2Q96PE1 1338 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 MGAMO43451 1857 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 GPR75-ASB3A0A0A6YYF3 556 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 RLBP1P12271 317 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 ARHGEF6Q15052 776 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 ZKSCAN2Q63HK3 967 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 SH3RF3Q8TEJ3 882 aaPredicted RBP17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 LRP2BPQ9P2M1 347 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 GABRQQ9UN88 632 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 AFG3L2Q9Y4W6 797 aa17.57■□□□□ 0.4
SMARCE1-205ENST00000431889 ATAD5Q96QE3 1844 aa17.56■□□□□ 0.4
SMARCE1-205ENST00000431889 RRP1BQ14684 758 aaKnown RBP17.56■□□□□ 0.4
SMARCE1-205ENST00000431889 SLF2Q8IX21 1173 aa17.56■□□□□ 0.4
SMARCE1-205ENST00000431889 FAM163AQ96GL9 167 aaPredicted RBP17.56■□□□□ 0.4
SMARCE1-205ENST00000431889 BCL11AQ9H165 835 aa17.56■□□□□ 0.4
SMARCE1-205ENST00000431889 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.56■□□□□ 0.42e-6■■■■■ 27.2
SMARCE1-205ENST00000431889 ZCCHC17Q9NP64 241 aaKnown RBP17.56■□□□□ 0.4
SMARCE1-205ENST00000431889 ARID4AP29374 1257 aaPredicted RBP17.55■□□□□ 0.4
SMARCE1-205ENST00000431889 PRKCZQ05513 592 aa17.55■□□□□ 0.4
SMARCE1-205ENST00000431889 SHROOM1Q2M3G4 852 aaPredicted RBP17.55■□□□□ 0.4
SMARCE1-205ENST00000431889 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
SMARCE1-205ENST00000431889 ITPRIPQ8IWB1 547 aa17.55■□□□□ 0.4
SMARCE1-205ENST00000431889 AATFQ9NY61 560 aaKnown RBP eCLIP17.55■□□□□ 0.4
SMARCE1-205ENST00000431889 TLR7Q9NYK1 1049 aaKnown RBP17.55■□□□□ 0.4
SMARCE1-205ENST00000431889 NDUFB9Q9Y6M9 179 aa17.55■□□□□ 0.4
SMARCE1-205ENST00000431889 PDS5AQ29RF7 1337 aaKnown RBP17.55■□□□□ 0.4
SMARCE1-205ENST00000431889 MYPNQ86TC9 1320 aa17.55■□□□□ 0.4
SMARCE1-205ENST00000431889 A0A0G2JLL6 359 aaPredicted RBP17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 CXCL11O14625 94 aa17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 SURF6O75683 361 aaKnown RBP17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 TNNI3KQ59H18 835 aa17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 TREML2Q5T2D2 321 aa17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 PRRT2Q7Z6L0 340 aaPredicted RBP17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 ADGRA1Q86SQ6 560 aa17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 TEX11Q8IYF3 940 aa17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 RAET1EQ8TD07 263 aa17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 CCDC8Q9H0W5 538 aaPredicted RBP17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 SRRDQ9UH36 339 aa17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 FPGT-TNNI3KV9GXZ4 949 aa17.54■□□□□ 0.4
SMARCE1-205ENST00000431889 FTSJ3Q8IY81 847 aaKnown RBP17.53■□□□□ 0.4
SMARCE1-205ENST00000431889 PARK7Q99497 189 aaKnown RBP17.53■□□□□ 0.4
SMARCE1-205ENST00000431889 OSBPL5Q9H0X9 879 aaPredicted RBP17.53■□□□□ 0.4
SMARCE1-205ENST00000431889 BIN2Q9UBW5 565 aaPredicted RBP17.53■□□□□ 0.4
SMARCE1-205ENST00000431889 TAOK2Q9UL54 1235 aa17.53■□□□□ 0.4
SMARCE1-205ENST00000431889 CDK5RAP2Q96SN8 1893 aa17.53■□□□□ 0.4
SMARCE1-205ENST00000431889 BCRP11274 1271 aa17.53■□□□□ 0.4
SMARCE1-205ENST00000431889 POLA2Q14181 598 aa17.53■□□□□ 0.4
SMARCE1-205ENST00000431889 SIPA1L1O43166 1804 aa17.52■□□□□ 0.4
SMARCE1-205ENST00000431889 CTNND1O60716 968 aaKnown RBP17.52■□□□□ 0.39
SMARCE1-205ENST00000431889 CYP2E1P05181 493 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms