RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 HNRNPLLQ8WVV9 542 aaKnown RBP4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 SLC7A3Q8WY07 619 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 WDR89Q96FK6 387 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 CARD10Q9BWT7 1032 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 CBX8Q9HC52 389 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 KCNK4Q9NYG8 393 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 SIRPGQ9P1W8 387 aa4.83□□□□□ -1.64
HMGB1P27-201ENST00000431429 TLDC2A0PJX2 215 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 SMAD7O15105 426 aaKnown RBP4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 ARHGEF15O94989 841 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 CANXP27824 592 aaKnown RBP4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 NTF4P34130 210 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 EIF6P56537 245 aaKnown RBP4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 TMEM201Q5SNT2 666 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 ZNF385CQ66K41 422 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 LINC00114Q6XXX2 140 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 NLGN1Q8N2Q7 840 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 WHAMMQ8TF30 809 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 KCNB2Q92953 911 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 TRIM11Q96F44 468 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 PLPPR2Q96GM1 343 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 CORO1BQ9BR76 489 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 WDR18Q9BV38 432 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 CDK11AQ9UQ88 783 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 PCDHB14Q9Y5E9 798 aa4.82□□□□□ -1.64
HMGB1P27-201ENST00000431429 MEGF11A6BM72 1044 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 DNAJA2O60884 412 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 HTR3BO95264 441 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 BPNT1O95861 308 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 LMNB1P20700 586 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 CDC25BP30305 580 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 NFE2L2Q16236 605 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 WIPI1Q5MNZ9 446 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 GK5Q6ZS86 529 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 JAZF1Q86VZ6 243 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 FBXO11Q86XK2 927 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 DMRTC2Q8IXT2 367 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 FMR1NBQ8N0W7 255 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 CELF2-AS1Q8N7Q2 184 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 TMPRSS13Q9BYE2 586 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 GSX1Q9H4S2 264 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 ZSWIM4Q9H7M6 989 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 PCDHA4Q9UN74 947 aa4.81□□□□□ -1.64
HMGB1P27-201ENST00000431429 A0A0A0MRY4 1105 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 K7ELQ4 463 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 TNFRSF10CO14798 259 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 TMPRSS2O15393 492 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 DDX3YO15523 660 aaKnown RBP4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 AOC2O75106 756 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 LIG1P18858 919 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 CD68P34810 354 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 ERVK-24P63145 666 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 TMEM40Q8WWA1 233 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 ANAPC16Q96DE5 110 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 FERD3LQ96RJ6 166 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 ZC3H12CQ9C0D7 883 aaKnown RBP4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 CCDC113Q9H0I3 377 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 TNKS2Q9H2K2 1166 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 SUGCTQ9HAC7 445 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 SNTG2Q9NY99 539 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 ADAM30Q9UKF2 790 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 CORINQ9Y5Q5 1042 aa4.8□□□□□ -1.64
HMGB1P27-201ENST00000431429 FAM221BA6H8Z2 402 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 UPK3BL1B0FP48 263 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 UPK3BL2E5RIL1 263 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 GRIN3BO60391 1043 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 WISP1O95388 367 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 ACRP10323 421 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 MCM4P33991 863 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 NLRP12P59046 1061 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 BMS1Q14692 1282 aaKnown RBP4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 DDR2Q16832 855 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 LRRFIP1Q32MZ4 808 aaKnown RBP4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 HP1BP3Q5SSJ5 553 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 CDCP2Q5VXM1 449 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 INTS3Q68E01 1043 aaKnown RBP4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 HDXQ7Z353 690 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 JMYQ8N9B5 988 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 DCAF11Q8TEB1 546 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 UBASH3BQ8TF42 649 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 CPLX3Q8WVH0 158 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 TM9SF2Q99805 663 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 ANTXR1Q9H6X2 564 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 CNNM2Q9H8M5 875 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 ACTR10Q9NZ32 417 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 CRIM1Q9NZV1 1036 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 REV1Q9UBZ9 1251 aa4.79□□□□□ -1.64
HMGB1P27-201ENST00000431429 A0A1W2PQH9 124 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 SLC22A31A6NKX4 558 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 ENPP3O14638 875 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 WFS1O76024 890 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 TIAF1O95411 115 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 CAP2P40123 477 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 EXOSC6Q5RKV6 272 aaKnown RBP4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 EGFLAMQ63HQ2 1017 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 DIEXFQ68CQ4 756 aaKnown RBP4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 OVOS1Q6IE37 1185 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 SDE2Q6IQ49 451 aa4.78□□□□□ -1.64
HMGB1P27-201ENST00000431429 RUFY4Q6ZNE9 571 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms