RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 BCAR3O75815 825 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 CYP2C8P10632 490 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 CTGFP29279 349 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 PSMC4P43686 418 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 MECOMQ03112 1051 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 MOGSQ13724 837 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 SLF2Q8IX21 1173 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 SCYL3Q8IZE3 742 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 TRIM47Q96LD4 638 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 PARK7Q99497 189 aaKnown RBP17.19■□□□□ 0.34
SEC13-211ENST00000431352 IDI2Q9BXS1 227 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.19■□□□□ 0.34
SEC13-211ENST00000431352 ZHX2Q9Y6X8 837 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 PDS5AQ29RF7 1337 aaKnown RBP17.19■□□□□ 0.34
SEC13-211ENST00000431352 ADGRA2Q96PE1 1338 aa17.19■□□□□ 0.34
SEC13-211ENST00000431352 DDTLA6NHG4 134 aaPredicted RBP17.18■□□□□ 0.34
SEC13-211ENST00000431352 IPO8O15397 1037 aaKnown RBP17.18■□□□□ 0.34
SEC13-211ENST00000431352 FMNL1O95466 1100 aaPredicted RBP17.18■□□□□ 0.34
SEC13-211ENST00000431352 GNAI2P04899 355 aa17.18■□□□□ 0.34
SEC13-211ENST00000431352 MTX1Q13505 466 aa17.18■□□□□ 0.34
SEC13-211ENST00000431352 GADL1Q6ZQY3 521 aa17.18■□□□□ 0.34
SEC13-211ENST00000431352 TBC1D9Q6ZT07 1266 aa17.18■□□□□ 0.34
SEC13-211ENST00000431352 PNMA6EA0A0J9YXQ4 647 aa17.17■□□□□ 0.34
SEC13-211ENST00000431352 PHF20L1A8MW92 1017 aa17.17■□□□□ 0.34
SEC13-211ENST00000431352 ATF7IPQ6VMQ6 1270 aa17.17■□□□□ 0.34
SEC13-211ENST00000431352 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
SEC13-211ENST00000431352 RAI14Q9P0K7 980 aa17.17■□□□□ 0.34
SEC13-211ENST00000431352 HMG20BQ9P0W2 317 aa17.17■□□□□ 0.34
SEC13-211ENST00000431352 MKI67P46013 3256 aaKnown RBP17.17■□□□□ 0.34
SEC13-211ENST00000431352 BRCA2P51587 3418 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 FAM196BA6NMK8 535 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 CXCL11O14625 94 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 GNRH1P01148 92 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 PTPRAP18433 802 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 OSBPP22059 807 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 G3BP1Q13283 466 aaKnown RBP eCLIP17.16■□□□□ 0.349e-9■□□□□ 8.3
SEC13-211ENST00000431352 GPAT2Q6NUI2 795 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 SPATA5Q8NB90 893 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 RAET1EQ8TD07 263 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 ZNF384Q8TF68 577 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 SRRDQ9UH36 339 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 MYPNQ86TC9 1320 aa17.16■□□□□ 0.34
SEC13-211ENST00000431352 A0A0G2JLL6 359 aaPredicted RBP17.15■□□□□ 0.34
SEC13-211ENST00000431352 TRIM75PA6NK02 468 aa17.15■□□□□ 0.34
SEC13-211ENST00000431352 PRMT2P55345 433 aa17.15■□□□□ 0.34
SEC13-211ENST00000431352 PRRT2Q7Z6L0 340 aaPredicted RBP17.15■□□□□ 0.34
SEC13-211ENST00000431352 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
SEC13-211ENST00000431352 FAM163AQ96GL9 167 aaPredicted RBP17.15■□□□□ 0.34
SEC13-211ENST00000431352 DOCK1Q14185 1865 aa17.15■□□□□ 0.34
SEC13-211ENST00000431352 GPR75-ASB3A0A0A6YYF3 556 aa17.14■□□□□ 0.33
SEC13-211ENST00000431352 ZBTB22O15209 634 aa17.14■□□□□ 0.33
SEC13-211ENST00000431352 HOXD10P28358 340 aa17.14■□□□□ 0.33
SEC13-211ENST00000431352 RHBDL3P58872 404 aa17.14■□□□□ 0.33
SEC13-211ENST00000431352 GSTO1P78417 241 aa17.14■□□□□ 0.33
SEC13-211ENST00000431352 OS9Q13438 667 aaPredicted RBP17.14■□□□□ 0.33
SEC13-211ENST00000431352 MTFR1Q15390 333 aa17.14■□□□□ 0.33
SEC13-211ENST00000431352 FASTKD5Q7L8L6 764 aaKnown RBP17.14■□□□□ 0.33
SEC13-211ENST00000431352 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
SEC13-211ENST00000431352 BIN2Q9UBW5 565 aaPredicted RBP17.14■□□□□ 0.33
SEC13-211ENST00000431352 AFG3L2Q9Y4W6 797 aa17.14■□□□□ 0.33
SEC13-211ENST00000431352 CTNND1O60716 968 aaKnown RBP17.13■□□□□ 0.33
SEC13-211ENST00000431352 BCRP11274 1271 aa17.13■□□□□ 0.33
SEC13-211ENST00000431352 ARID4AP29374 1257 aaPredicted RBP17.13■□□□□ 0.33
SEC13-211ENST00000431352 MCAMP43121 646 aa17.13■□□□□ 0.33
SEC13-211ENST00000431352 FCGRTP55899 365 aa17.13■□□□□ 0.33
SEC13-211ENST00000431352 PRKCZQ05513 592 aa17.13■□□□□ 0.33
SEC13-211ENST00000431352 NSUN4Q96CB9 384 aaKnown RBP17.13■□□□□ 0.33
SEC13-211ENST00000431352 C1orf115Q9H7X2 142 aa17.13■□□□□ 0.33
SEC13-211ENST00000431352 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.13■□□□□ 0.33
SEC13-211ENST00000431352 SNRKQ9NRH2 765 aa17.13■□□□□ 0.33
SEC13-211ENST00000431352 LRP2BPQ9P2M1 347 aa17.13■□□□□ 0.33
SEC13-211ENST00000431352 LDHCP07864 332 aa17.12■□□□□ 0.33
SEC13-211ENST00000431352 GRK4P32298 578 aa17.12■□□□□ 0.33
SEC13-211ENST00000431352 ZKSCAN2Q63HK3 967 aa17.12■□□□□ 0.33
SEC13-211ENST00000431352 SMCR8Q8TEV9 937 aaPredicted RBP17.12■□□□□ 0.33
SEC13-211ENST00000431352 MAP3K10Q02779 954 aa17.11■□□□□ 0.33
SEC13-211ENST00000431352 HABP4Q5JVS0 413 aaKnown RBP17.11■□□□□ 0.33
SEC13-211ENST00000431352 TTC39AQ5SRH9 613 aa17.11■□□□□ 0.33
SEC13-211ENST00000431352 TEX11Q8IYF3 940 aa17.11■□□□□ 0.33
SEC13-211ENST00000431352 SHISA4Q96DD7 197 aa17.11■□□□□ 0.33
SEC13-211ENST00000431352 NOL10Q9BSC4 688 aaKnown RBP17.11■□□□□ 0.33
SEC13-211ENST00000431352 OSBPL5Q9H0X9 879 aaPredicted RBP17.11■□□□□ 0.33
SEC13-211ENST00000431352 PTPRFP10586 1907 aa17.1■□□□□ 0.33
SEC13-211ENST00000431352 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
SEC13-211ENST00000431352 TREML2Q5T2D2 321 aa17.1■□□□□ 0.33
SEC13-211ENST00000431352 SH3RF3Q8TEJ3 882 aaPredicted RBP17.1■□□□□ 0.33
SEC13-211ENST00000431352 TAOK2Q9UL54 1235 aa17.1■□□□□ 0.33
SEC13-211ENST00000431352 GABRQQ9UN88 632 aa17.1■□□□□ 0.33
SEC13-211ENST00000431352 PHIPQ8WWQ0 1821 aa17.1■□□□□ 0.33
SEC13-211ENST00000431352 CCL5P13501 91 aa17.09■□□□□ 0.33
SEC13-211ENST00000431352 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
SEC13-211ENST00000431352 TNNI3KQ59H18 835 aa17.09■□□□□ 0.33
SEC13-211ENST00000431352 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
SEC13-211ENST00000431352 DBNDD2Q9BQY9 259 aa17.09■□□□□ 0.33
SEC13-211ENST00000431352 AATFQ9NY61 560 aaKnown RBP eCLIP17.09■□□□□ 0.33
SEC13-211ENST00000431352 AGTPBP1Q9UPW5 1226 aa17.09■□□□□ 0.33
SEC13-211ENST00000431352 FPGT-TNNI3KV9GXZ4 949 aa17.09■□□□□ 0.33
SEC13-211ENST00000431352 MAST2Q6P0Q8 1798 aa17.09■□□□□ 0.33
SEC13-211ENST00000431352 TNPO2O14787 897 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms