RNA–Protein interactions for RNA: ENST00000430789.1

AFF3-209, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 3

Gene AFF3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-209ENST00000430789 TNPO2O14787 897 aaKnown RBP7.44□□□□□ -1.22
AFF3-209ENST00000430789 VAMP4O75379 141 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 SYN1P17600 705 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 PTPRAP18433 802 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 FGFR2P21802 821 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 CCDC27Q2M243 656 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 TAF7LQ5H9L4 462 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 OGDHLQ9ULD0 1010 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 DAGLAQ9Y4D2 1042 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 ZHX2Q9Y6X8 837 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 VCANP13611 3396 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 PFASO15067 1338 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 MROH5Q6ZUA9 1318 aa7.44□□□□□ -1.22
AFF3-209ENST00000430789 COL2A1P02458 1487 aaPredicted RBP7.43□□□□□ -1.22
AFF3-209ENST00000430789 PDE8BO95263 885 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 COL6A1P12109 1028 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 TCP10Q12799 353 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 TRIM32Q13049 653 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 LRRC24Q50LG9 513 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 MAP3K21Q5TCX8 1036 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 SH3BP5LQ7L8J4 393 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 WWC1Q8IX03 1113 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 SCYL3Q8IZE3 742 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 SUCLG2Q96I99 432 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 UBE2OQ9C0C9 1292 aaKnown RBP7.43□□□□□ -1.22
AFF3-209ENST00000430789 PRDM6Q9NQX0 595 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 UTYO14607 1347 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 MAST3O60307 1309 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 IL16Q14005 1332 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 RPTORQ8N122 1335 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 KIF16BQ96L93 1317 aa7.43□□□□□ -1.22
AFF3-209ENST00000430789 HMGCRP04035 888 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 SLURP2P0DP57 97 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 DIXDC1Q155Q3 683 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 FAM110CQ1W6H9 321 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 RABL6Q3YEC7 729 aaPredicted RBP7.42□□□□□ -1.22
AFF3-209ENST00000430789 CAVIN4Q5BKX8 364 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 VPS37DQ86XT2 251 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 ANKRD13CQ8N6S4 541 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 COA7Q96BR5 231 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 C11orf49Q9H6J7 331 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 HMX1Q9NP08 348 aaPredicted RBP7.42□□□□□ -1.22
AFF3-209ENST00000430789 AGTPBP1Q9UPW5 1226 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 MGAMO43451 1857 aa7.42□□□□□ -1.22
AFF3-209ENST00000430789 DOCK3Q8IZD9 2030 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 CTNND1O60716 968 aaKnown RBP7.41□□□□□ -1.22
AFF3-209ENST00000430789 ALDH1L1O75891 902 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 NBPF7P0C2Y1 421 aaPredicted RBP7.41□□□□□ -1.22
AFF3-209ENST00000430789 DDX10Q13206 875 aaKnown RBP7.41□□□□□ -1.22
AFF3-209ENST00000430789 TREML2Q5T2D2 321 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 LHX8Q68G74 356 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 GADL1Q6ZQY3 521 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 ANKRD44Q8N8A2 993 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 WDR66Q8TBY9 1149 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 IDI2Q9BXS1 227 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 PRKRIP1Q9H875 184 aaPredicted RBP7.41□□□□□ -1.22
AFF3-209ENST00000430789 USP40Q9NVE5 1235 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 RFX7Q2KHR2 1363 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 TTC28Q96AY4 2481 aa7.41□□□□□ -1.22
AFF3-209ENST00000430789 LAMA2P24043 3122 aaKnown RBP7.4□□□□□ -1.22
AFF3-209ENST00000430789 ZBTB22O15209 634 aa7.4□□□□□ -1.22
AFF3-209ENST00000430789 ENTPD3O75355 529 aa7.4□□□□□ -1.22
AFF3-209ENST00000430789 FRAT2O75474 233 aaPredicted RBP7.4□□□□□ -1.22
AFF3-209ENST00000430789 LRRC26Q2I0M4 334 aa7.4□□□□□ -1.22
AFF3-209ENST00000430789 METTL24Q5JXM2 366 aa7.4□□□□□ -1.22
AFF3-209ENST00000430789 SMCR8Q8TEV9 937 aaPredicted RBP7.4□□□□□ -1.22
AFF3-209ENST00000430789 TRIB2Q92519 343 aa7.4□□□□□ -1.22
AFF3-209ENST00000430789 CDX2Q99626 313 aaPredicted RBP7.4□□□□□ -1.22
AFF3-209ENST00000430789 BICC1Q9H694 974 aaKnown RBP7.4□□□□□ -1.22
AFF3-209ENST00000430789 PICK1Q9NRD5 415 aa7.4□□□□□ -1.22
AFF3-209ENST00000430789 C9orf78Q9NZ63 289 aaPredicted RBP7.4□□□□□ -1.22
AFF3-209ENST00000430789 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.4□□□□□ -1.22
AFF3-209ENST00000430789 TAOK2Q9UL54 1235 aa7.4□□□□□ -1.22
AFF3-209ENST00000430789 FANCIQ9NVI1 1328 aa7.4□□□□□ -1.22
AFF3-209ENST00000430789 DDTLA6NHG4 134 aaPredicted RBP7.39□□□□□ -1.23
AFF3-209ENST00000430789 TRIM75PA6NK02 468 aa7.39□□□□□ -1.23
AFF3-209ENST00000430789 XRCC5P13010 732 aaKnown RBP7.39□□□□□ -1.23
AFF3-209ENST00000430789 PRDX5P30044 214 aa7.39□□□□□ -1.23
AFF3-209ENST00000430789 GCLCP48506 637 aaPredicted RBP7.39□□□□□ -1.23
AFF3-209ENST00000430789 RGS3P49796 1198 aa7.39□□□□□ -1.23
AFF3-209ENST00000430789 MDM2Q00987 491 aaPredicted RBP7.39□□□□□ -1.23
AFF3-209ENST00000430789 EXOSC9Q06265 439 aaKnown RBP7.39□□□□□ -1.23
AFF3-209ENST00000430789 CCDC84Q86UT8 332 aaPredicted RBP7.39□□□□□ -1.23
AFF3-209ENST00000430789 PROCA1Q8NCQ7 364 aaPredicted RBP7.39□□□□□ -1.23
AFF3-209ENST00000430789 KLHDC4Q8TBB5 520 aa7.39□□□□□ -1.23
AFF3-209ENST00000430789 USP6NLQ92738 828 aa7.39□□□□□ -1.23
AFF3-209ENST00000430789 FAM163AQ96GL9 167 aaPredicted RBP7.39□□□□□ -1.23
AFF3-209ENST00000430789 SRCIN1Q9C0H9 1055 aa7.39□□□□□ -1.23
AFF3-209ENST00000430789 SEMA6BQ9H3T3 888 aa7.39□□□□□ -1.23
AFF3-209ENST00000430789 MORF4L1Q9UBU8 362 aa7.39□□□□□ -1.23
AFF3-209ENST00000430789 PRUNE2Q8WUY3 3088 aa7.38□□□□□ -1.23
AFF3-209ENST00000430789 EYSQ5T1H1 3165 aa7.38□□□□□ -1.23
AFF3-209ENST00000430789 GAKO14976 1311 aa7.38□□□□□ -1.23
AFF3-209ENST00000430789 SALL1Q9NSC2 1324 aa7.38□□□□□ -1.23
AFF3-209ENST00000430789 TBC1D12O60347 775 aa7.38□□□□□ -1.23
AFF3-209ENST00000430789 PRKAR2AP13861 404 aaKnown RBP7.38□□□□□ -1.23
AFF3-209ENST00000430789 RFX5P48382 616 aaPredicted RBP7.38□□□□□ -1.23
AFF3-209ENST00000430789 RRP1BQ14684 758 aaKnown RBP7.38□□□□□ -1.23
AFF3-209ENST00000430789 PUM3Q15397 648 aaKnown RBP7.38□□□□□ -1.23
AFF3-209ENST00000430789 SH3D19Q5HYK7 790 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms