RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PHF20L1A8MW92 1017 aa14.57□□□□□ -0.08
HDAC4-202ENST00000430200 ZBTB7BO15156 539 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-202ENST00000430200 PPIL2Q13356 520 aa14.57□□□□□ -0.08
HDAC4-202ENST00000430200 TAF1CQ15572 869 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-202ENST00000430200 ITPRIPQ8IWB1 547 aa14.57□□□□□ -0.08
HDAC4-202ENST00000430200 SPATA5Q8NB90 893 aa14.57□□□□□ -0.08
HDAC4-202ENST00000430200 IDI2Q9BXS1 227 aa14.57□□□□□ -0.08
HDAC4-202ENST00000430200 ARHGAP39Q9C0H5 1083 aa14.57□□□□□ -0.08
HDAC4-202ENST00000430200 HDAC5Q9UQL6 1122 aa14.57□□□□□ -0.08
HDAC4-202ENST00000430200 PLXNB2O15031 1838 aa14.57□□□□□ -0.08
HDAC4-202ENST00000430200 COL2A1P02458 1487 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-202ENST00000430200 CTGFP29279 349 aa14.56□□□□□ -0.08
HDAC4-202ENST00000430200 GTF2A2P52657 109 aa14.56□□□□□ -0.08
HDAC4-202ENST00000430200 PICALMQ13492 652 aa14.56□□□□□ -0.08
HDAC4-202ENST00000430200 TNNI3KQ59H18 835 aa14.56□□□□□ -0.08
HDAC4-202ENST00000430200 NOL9Q5SY16 702 aaKnown RBP14.56□□□□□ -0.08
HDAC4-202ENST00000430200 ADGRA1Q86SQ6 560 aa14.56□□□□□ -0.08
HDAC4-202ENST00000430200 CCDC84Q86UT8 332 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-202ENST00000430200 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.56□□□□□ -0.08
HDAC4-202ENST00000430200 NSUN4Q96CB9 384 aaKnown RBP14.56□□□□□ -0.08
HDAC4-202ENST00000430200 SNRKQ9NRH2 765 aa14.56□□□□□ -0.08
HDAC4-202ENST00000430200 DBNLQ9UJU6 430 aaKnown RBP14.56□□□□□ -0.08
HDAC4-202ENST00000430200 AKAP2Q9Y2D5 859 aa14.56□□□□□ -0.08
HDAC4-202ENST00000430200 FPGT-TNNI3KV9GXZ4 949 aa14.56□□□□□ -0.08
HDAC4-202ENST00000430200 MYH8P13535 1937 aa14.56□□□□□ -0.08
HDAC4-202ENST00000430200 ATP8B2P98198 1209 aa14.55□□□□□ -0.08
HDAC4-202ENST00000430200 PKN2Q16513 984 aaKnown RBP14.55□□□□□ -0.08
HDAC4-202ENST00000430200 DCAF15Q66K64 600 aa14.55□□□□□ -0.08
HDAC4-202ENST00000430200 CEP85Q6P2H3 762 aa14.55□□□□□ -0.08
HDAC4-202ENST00000430200 FAM163AQ96GL9 167 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-202ENST00000430200 KCNH4Q9UQ05 1017 aa14.55□□□□□ -0.08
HDAC4-202ENST00000430200 GPR75-ASB3A0A0A6YYF3 556 aa14.54□□□□□ -0.08
HDAC4-202ENST00000430200 ENTPD3O75355 529 aa14.54□□□□□ -0.08
HDAC4-202ENST00000430200 SP3Q02447 781 aa14.54□□□□□ -0.08
HDAC4-202ENST00000430200 RRP1BQ14684 758 aaKnown RBP14.54□□□□□ -0.08
HDAC4-202ENST00000430200 FTSJ3Q8IY81 847 aaKnown RBP14.54□□□□□ -0.08
HDAC4-202ENST00000430200 ZGPATQ8N5A5 531 aaKnown RBP14.54□□□□□ -0.08
HDAC4-202ENST00000430200 NDUFB9Q9Y6M9 179 aa14.54□□□□□ -0.08
HDAC4-202ENST00000430200 BAZ2AQ9UIF9 1905 aaKnown RBP14.54□□□□□ -0.08
HDAC4-202ENST00000430200 POTEFA5A3E0 1075 aa14.53□□□□□ -0.08
HDAC4-202ENST00000430200 ECM2O94769 699 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-202ENST00000430200 CETPP11597 493 aa14.53□□□□□ -0.08
HDAC4-202ENST00000430200 PPATQ06203 517 aa14.53□□□□□ -0.08
HDAC4-202ENST00000430200 G3BP1Q13283 466 aaKnown RBP eCLIP14.53□□□□□ -0.08
HDAC4-202ENST00000430200 SNAPC2Q13487 334 aa14.53□□□□□ -0.08
HDAC4-202ENST00000430200 ERICH6Q7L0X2 663 aa14.53□□□□□ -0.08
HDAC4-202ENST00000430200 ERO1AQ96HE7 468 aa14.53□□□□□ -0.08
HDAC4-202ENST00000430200 PIH1D3Q9NQM4 214 aaKnown RBP14.53□□□□□ -0.08
HDAC4-202ENST00000430200 PTPN22Q9Y2R2 807 aa14.53□□□□□ -0.08
HDAC4-202ENST00000430200 NOP58Q9Y2X3 529 aaKnown RBP14.53□□□□□ -0.08
HDAC4-202ENST00000430200 SURF6O75683 361 aaKnown RBP14.52□□□□□ -0.09
HDAC4-202ENST00000430200 CYP2E1P05181 493 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-202ENST00000430200 MAP3K10Q02779 954 aa14.52□□□□□ -0.09
HDAC4-202ENST00000430200 SHROOM1Q2M3G4 852 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-202ENST00000430200 GPAT2Q6NUI2 795 aa14.52□□□□□ -0.09
HDAC4-202ENST00000430200 SH3RF3Q8TEJ3 882 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-202ENST00000430200 EAF2Q96CJ1 260 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-202ENST00000430200 HOOK2Q96ED9 719 aa14.52□□□□□ -0.09
HDAC4-202ENST00000430200 GPR108Q9NPR9 543 aa14.52□□□□□ -0.09
HDAC4-202ENST00000430200 EXOC6BQ9Y2D4 811 aa14.52□□□□□ -0.09
HDAC4-202ENST00000430200 PTCH2Q9Y6C5 1203 aa14.52□□□□□ -0.09
HDAC4-202ENST00000430200 TLR2O60603 784 aa14.51□□□□□ -0.09
HDAC4-202ENST00000430200 ZAP70P43403 619 aa14.51□□□□□ -0.09
HDAC4-202ENST00000430200 GORABQ5T7V8 394 aa14.51□□□□□ -0.09
HDAC4-202ENST00000430200 OTUD7BQ6GQQ9 843 aa14.51□□□□□ -0.09
HDAC4-202ENST00000430200 SCYL3Q8IZE3 742 aa14.51□□□□□ -0.09
HDAC4-202ENST00000430200 CCDC8Q9H0W5 538 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-202ENST00000430200 EFCC1Q9HA90 598 aa14.51□□□□□ -0.09
HDAC4-202ENST00000430200 RAI14Q9P0K7 980 aa14.51□□□□□ -0.09
HDAC4-202ENST00000430200 PTPRAP18433 802 aa14.5□□□□□ -0.09
HDAC4-202ENST00000430200 JAG1P78504 1218 aa14.5□□□□□ -0.09
HDAC4-202ENST00000430200 LACTBP83111 547 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-202ENST00000430200 SPTY2D1Q68D10 685 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-202ENST00000430200 C17orf99Q6UX52 265 aa14.5□□□□□ -0.09
HDAC4-202ENST00000430200 ZSCAN29Q8IWY8 852 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-202ENST00000430200 SIRT2Q8IXJ6 389 aa14.5□□□□□ -0.09
HDAC4-202ENST00000430200 ARMC5Q96C12 935 aa14.5□□□□□ -0.09
HDAC4-202ENST00000430200 OSBPL5Q9H0X9 879 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-202ENST00000430200 DNAJC18Q9H819 358 aa14.5□□□□□ -0.09
HDAC4-202ENST00000430200 ZFYVE28Q9HCC9 887 aa14.5□□□□□ -0.09
HDAC4-202ENST00000430200 CPA4Q9UI42 421 aa14.5□□□□□ -0.09
HDAC4-202ENST00000430200 ALPK3Q96L96 1907 aa14.5□□□□□ -0.09
HDAC4-202ENST00000430200 PARP14Q460N5 1801 aa14.5□□□□□ -0.09
HDAC4-202ENST00000430200 PDHXO00330 501 aa14.49□□□□□ -0.09
HDAC4-202ENST00000430200 UQCRFS1P1P0C7P4 283 aa14.49□□□□□ -0.09
HDAC4-202ENST00000430200 CYP2C8P10632 490 aa14.49□□□□□ -0.09
HDAC4-202ENST00000430200 OS9Q13438 667 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-202ENST00000430200 TTC39AQ5SRH9 613 aa14.49□□□□□ -0.09
HDAC4-202ENST00000430200 ANKRD23Q86SG2 305 aa14.49□□□□□ -0.09
HDAC4-202ENST00000430200 ANTXR1Q9H6X2 564 aa14.49□□□□□ -0.09
HDAC4-202ENST00000430200 ZCCHC17Q9NP64 241 aaKnown RBP14.49□□□□□ -0.09
HDAC4-202ENST00000430200 AATFQ9NY61 560 aaKnown RBP eCLIP14.49□□□□□ -0.09
HDAC4-202ENST00000430200 FLT1P17948 1338 aa14.48□□□□□ -0.09
HDAC4-202ENST00000430200 A0A0G2JLL6 359 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-202ENST00000430200 C20orf194Q5TEA3 1177 aa14.48□□□□□ -0.09
HDAC4-202ENST00000430200 PRRT2Q7Z6L0 340 aaPredicted RBP14.48□□□□□ -0.09
HDAC4-202ENST00000430200 TEX11Q8IYF3 940 aa14.48□□□□□ -0.09
HDAC4-202ENST00000430200 TRIM47Q96LD4 638 aa14.48□□□□□ -0.09
HDAC4-202ENST00000430200 AFG3L2Q9Y4W6 797 aa14.48□□□□□ -0.09
HDAC4-202ENST00000430200 FRMPD3Q5JV73 1810 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms