RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ZSCAN29Q8IWY8 852 aaPredicted RBP18.39■□□□□ 0.53
MSH5-208ENST00000429846 ZFPM1Q8IX07 1006 aa18.39■□□□□ 0.53
MSH5-208ENST00000429846 ARHGAP39Q9C0H5 1083 aa18.39■□□□□ 0.53
MSH5-208ENST00000429846 PICK1Q9NRD5 415 aa18.39■□□□□ 0.53
MSH5-208ENST00000429846 COL2A1P02458 1487 aaPredicted RBP18.39■□□□□ 0.53
MSH5-208ENST00000429846 CENPFP49454 3210 aa18.38■□□□□ 0.53
MSH5-208ENST00000429846 PHIPQ8WWQ0 1821 aa18.38■□□□□ 0.53
MSH5-208ENST00000429846 GPR75-ASB3A0A0A6YYF3 556 aa18.38■□□□□ 0.53
MSH5-208ENST00000429846 NPM3O75607 178 aaKnown RBP18.38■□□□□ 0.53
MSH5-208ENST00000429846 GSTO1P78417 241 aa18.38■□□□□ 0.53
MSH5-208ENST00000429846 MOGSQ13724 837 aa18.38■□□□□ 0.53
MSH5-208ENST00000429846 FASTKD5Q7L8L6 764 aaKnown RBP18.38■□□□□ 0.53
MSH5-208ENST00000429846 FRAT1Q92837 279 aaPredicted RBP18.38■□□□□ 0.53
MSH5-208ENST00000429846 NEUROD6Q96NK8 337 aa18.38■□□□□ 0.53
MSH5-208ENST00000429846 MAST2Q6P0Q8 1798 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 MGAMO43451 1857 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 LDHCP07864 332 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 PTPRAP18433 802 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 EN2P19622 333 aaPredicted RBP18.37■□□□□ 0.53
MSH5-208ENST00000429846 HOXD10P28358 340 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 ARID4AP29374 1257 aaPredicted RBP18.37■□□□□ 0.53
MSH5-208ENST00000429846 MECOMQ03112 1051 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 G3BP1Q13283 466 aaKnown RBP eCLIP18.37■□□□□ 0.53
MSH5-208ENST00000429846 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 SH3BP5LQ7L8J4 393 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 SPATA5Q8NB90 893 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 DDX4Q9NQI0 724 aaKnown RBP18.37■□□□□ 0.53
MSH5-208ENST00000429846 HMG20BQ9P0W2 317 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 PCDH10Q9P2E7 1040 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 CPA4Q9UI42 421 aa18.37■□□□□ 0.53
MSH5-208ENST00000429846 A0A0G2JLL6 359 aaPredicted RBP18.36■□□□□ 0.53
MSH5-208ENST00000429846 DDTLA6NHG4 134 aaPredicted RBP18.36■□□□□ 0.53
MSH5-208ENST00000429846 CTNND1O60716 968 aaKnown RBP18.36■□□□□ 0.53
MSH5-208ENST00000429846 BCAR3O75815 825 aa18.36■□□□□ 0.53
MSH5-208ENST00000429846 PICALMQ13492 652 aa18.36■□□□□ 0.53
MSH5-208ENST00000429846 SLC4A8Q2Y0W8 1093 aa18.36■□□□□ 0.53
MSH5-208ENST00000429846 PRRT2Q7Z6L0 340 aaPredicted RBP18.36■□□□□ 0.53
MSH5-208ENST00000429846 SRRDQ9UH36 339 aa18.36■□□□□ 0.53
MSH5-208ENST00000429846 SLC45A1Q9Y2W3 748 aa18.36■□□□□ 0.53
MSH5-208ENST00000429846 ZHX2Q9Y6X8 837 aa18.36■□□□□ 0.53
MSH5-208ENST00000429846 PNMA6EA0A0J9YXQ4 647 aa18.35■□□□□ 0.53
MSH5-208ENST00000429846 UQCRFS1P1P0C7P4 283 aa18.35■□□□□ 0.53
MSH5-208ENST00000429846 PSMC4P43686 418 aa18.35■□□□□ 0.53
MSH5-208ENST00000429846 RHBDL3P58872 404 aa18.35■□□□□ 0.53
MSH5-208ENST00000429846 ZKSCAN2Q63HK3 967 aa18.35■□□□□ 0.53
MSH5-208ENST00000429846 CLUAP1Q96AJ1 413 aa18.35■□□□□ 0.53
MSH5-208ENST00000429846 NSUN4Q96CB9 384 aaKnown RBP18.35■□□□□ 0.53
MSH5-208ENST00000429846 AFG3L2Q9Y4W6 797 aa18.35■□□□□ 0.53
MSH5-208ENST00000429846 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
MSH5-208ENST00000429846 TBC1D12O60347 775 aa18.34■□□□□ 0.53
MSH5-208ENST00000429846 BCRP11274 1271 aa18.34■□□□□ 0.53
MSH5-208ENST00000429846 GPAT2Q6NUI2 795 aa18.34■□□□□ 0.53
MSH5-208ENST00000429846 SH3TC2Q8TF17 1288 aa18.34■□□□□ 0.53
MSH5-208ENST00000429846 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
MSH5-208ENST00000429846 TRIM47Q96LD4 638 aa18.34■□□□□ 0.53
MSH5-208ENST00000429846 ATAD5Q96QE3 1844 aa18.34■□□□□ 0.53
MSH5-208ENST00000429846 BRCA2P51587 3418 aa18.33■□□□□ 0.52
MSH5-208ENST00000429846 FMNL1O95466 1100 aaPredicted RBP18.33■□□□□ 0.52
MSH5-208ENST00000429846 OSBPP22059 807 aa18.33■□□□□ 0.52
MSH5-208ENST00000429846 CTGFP29279 349 aa18.33■□□□□ 0.52
MSH5-208ENST00000429846 MCAMP43121 646 aa18.33■□□□□ 0.52
MSH5-208ENST00000429846 FCGRTP55899 365 aa18.33■□□□□ 0.52
MSH5-208ENST00000429846 PI16Q6UXB8 463 aa18.33■□□□□ 0.52
MSH5-208ENST00000429846 GPR108Q9NPR9 543 aa18.33■□□□□ 0.52
MSH5-208ENST00000429846 TNNQ9UQP3 1299 aa18.33■□□□□ 0.52
MSH5-208ENST00000429846 LOC285556D6RIA3 1793 aa18.32■□□□□ 0.52
MSH5-208ENST00000429846 MYPNQ86TC9 1320 aa18.32■□□□□ 0.52
MSH5-208ENST00000429846 IGSF3O75054 1194 aa18.32■□□□□ 0.52
MSH5-208ENST00000429846 CYP2C8P10632 490 aa18.32■□□□□ 0.52
MSH5-208ENST00000429846 TMEM57Q8N5G2 664 aa18.32■□□□□ 0.52
MSH5-208ENST00000429846 RAET1EQ8TD07 263 aa18.32■□□□□ 0.52
MSH5-208ENST00000429846 TBC1D2Q9BYX2 928 aa18.32■□□□□ 0.52
MSH5-208ENST00000429846 OSBPL5Q9H0X9 879 aaPredicted RBP18.32■□□□□ 0.52
MSH5-208ENST00000429846 RAI14Q9P0K7 980 aa18.32■□□□□ 0.52
MSH5-208ENST00000429846 FOCADQ5VW36 1801 aa18.31■□□□□ 0.52
MSH5-208ENST00000429846 GRK4P32298 578 aa18.31■□□□□ 0.52
MSH5-208ENST00000429846 POLA2Q14181 598 aa18.31■□□□□ 0.52
MSH5-208ENST00000429846 GADL1Q6ZQY3 521 aa18.31■□□□□ 0.52
MSH5-208ENST00000429846 SSH3Q8TE77 659 aa18.31■□□□□ 0.52
MSH5-208ENST00000429846 NOL10Q9BSC4 688 aaKnown RBP18.31■□□□□ 0.52
MSH5-208ENST00000429846 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.31■□□□□ 0.52
MSH5-208ENST00000429846 LRP2BPQ9P2M1 347 aa18.31■□□□□ 0.52
MSH5-208ENST00000429846 MKI67P46013 3256 aaKnown RBP18.31■□□□□ 0.52
MSH5-208ENST00000429846 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
MSH5-208ENST00000429846 TBC1D9Q6ZT07 1266 aa18.3■□□□□ 0.52
MSH5-208ENST00000429846 NKX2-3Q8TAU0 364 aa18.3■□□□□ 0.52
MSH5-208ENST00000429846 AGTPBP1Q9UPW5 1226 aa18.3■□□□□ 0.52
MSH5-208ENST00000429846 CDK5RAP2Q96SN8 1893 aa18.3■□□□□ 0.52
MSH5-208ENST00000429846 TRIM75PA6NK02 468 aa18.29■□□□□ 0.52
MSH5-208ENST00000429846 MYCP01106 439 aaPredicted RBP18.29■□□□□ 0.52
MSH5-208ENST00000429846 PLCG2P16885 1265 aa18.29■□□□□ 0.52
MSH5-208ENST00000429846 TNNI3KQ59H18 835 aa18.29■□□□□ 0.52
MSH5-208ENST00000429846 FTSJ3Q8IY81 847 aaKnown RBP18.29■□□□□ 0.52
MSH5-208ENST00000429846 PROCA1Q8NCQ7 364 aaPredicted RBP18.29■□□□□ 0.52
MSH5-208ENST00000429846 SMCR8Q8TEV9 937 aaPredicted RBP18.29■□□□□ 0.52
MSH5-208ENST00000429846 HERC5Q9UII4 1024 aaKnown RBP18.29■□□□□ 0.52
MSH5-208ENST00000429846 PNMA3Q9UL41 463 aa18.29■□□□□ 0.52
MSH5-208ENST00000429846 FPGT-TNNI3KV9GXZ4 949 aa18.29■□□□□ 0.52
MSH5-208ENST00000429846 ECM2O94769 699 aaPredicted RBP18.28■□□□□ 0.52
MSH5-208ENST00000429846 BAG3O95817 575 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms