RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 SSH3Q8TE77 659 aa19.44■□□□□ 0.7
SMARCA4-203ENST00000429416 RMND1Q9NWS8 449 aa19.44■□□□□ 0.7
SMARCA4-203ENST00000429416 ICA1Q05084 483 aa19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 DPH6Q7L8W6 267 aa19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 hCG_1642624A0A1W2PR95 340 aa19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 ERLIN2O94905 339 aa19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 TOP1P11387 765 aaKnown RBP19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 DNA2P51530 1060 aa19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 NCAPG2Q86XI2 1143 aa19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 FAM43AQ8N2R8 423 aa19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 NCOA5Q9HCD5 579 aaKnown RBP19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 FLOT1O75955 427 aa19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 FAM47CQ5HY64 1035 aa19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 SMIM5Q71RC9 77 aa19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 LRRC47Q8N1G4 583 aaKnown RBP19.43■□□□□ 0.7
SMARCA4-203ENST00000429416 NEFHP12036 1026 aa19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 ARMC9Q7Z3E5 817 aa19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 FAM114A1Q8IWE2 563 aa19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 AZI2Q9H6S1 392 aa19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 PIK3AP1Q6ZUJ8 805 aa19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 CLTCL1P53675 1640 aa19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 RNF17Q9BXT8 1623 aaKnown RBP19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 PLCD3Q8N3E9 789 aa19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 IMPG2Q9BZV3 1241 aa19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 ADRA2BP18089 450 aa19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 HSP90B2PQ58FF3 399 aa19.42■□□□□ 0.7
SMARCA4-203ENST00000429416 DEXIO95424 95 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 RPS6KB1P23443 525 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 TBC1D9BQ66K14 1250 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 DHX37Q8IY37 1157 aaKnown RBP19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 SYNCQ9H7C4 482 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 CAMSAP1Q5T5Y3 1602 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 NAP1L4Q99733 375 aaKnown RBP19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 ACBD3Q9H3P7 528 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 COL15A1P39059 1388 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 USP17L3A6NCW0 530 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 USP17L4A6NCW7 530 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 SPTLC2O15270 562 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 MYCP01106 439 aaPredicted RBP19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 TAF12Q16514 161 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 ABCB5Q2M3G0 1257 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 USP17L1Q7RTZ2 530 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 ANKRD35Q8N283 1001 aa19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 SFPQP23246 707 aaKnown RBP eCLIP19.41■□□□□ 0.7
SMARCA4-203ENST00000429416 CCNT1O60563 726 aaKnown RBP19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 ADCY7P51828 1080 aa19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 HSP90AA4PQ58FG1 418 aa19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 IFNL3Q8IZI9 196 aa19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 ABCC4O15439 1325 aa19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 VWA3AA6NCI4 1184 aa19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 HS2ST1Q7LGA3 356 aa19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 FRMPD2Q68DX3 1309 aaPredicted RBP19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 CNPY2Q9Y2B0 182 aa19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 MRPS27Q92552 414 aaKnown RBP19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 SEC62Q99442 399 aaKnown RBP19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 COPRSQ9NQ92 184 aa19.4■□□□□ 0.7
SMARCA4-203ENST00000429416 ZMYM4Q5VZL5 1548 aa19.39■□□□□ 0.7
SMARCA4-203ENST00000429416 SEMA3EO15041 775 aa19.39■□□□□ 0.69
SMARCA4-203ENST00000429416 SGSM2O43147 1006 aa19.39■□□□□ 0.69
SMARCA4-203ENST00000429416 SPICE1Q8N0Z3 855 aa19.39■□□□□ 0.69
SMARCA4-203ENST00000429416 GLT8D2Q9H1C3 349 aa19.39■□□□□ 0.69
SMARCA4-203ENST00000429416 IQGAP3Q86VI3 1631 aa19.39■□□□□ 0.69
SMARCA4-203ENST00000429416 AOX1Q06278 1338 aa19.39■□□□□ 0.69
SMARCA4-203ENST00000429416 CCT6AP40227 531 aaKnown RBP19.39■□□□□ 0.69
SMARCA4-203ENST00000429416 DNM1Q05193 864 aaKnown RBP19.39■□□□□ 0.69
SMARCA4-203ENST00000429416 CCDC169A6NNP5 214 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 TXKP42681 527 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 MIGA2Q7L4E1 593 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 CPSF1Q10570 1443 aaKnown RBP19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 PHKBQ93100 1093 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 ARHGEF6Q15052 776 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 MAEAQ7L5Y9 396 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 IL27Q8NEV9 243 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 USP26Q9BXU7 913 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 GRPEL1Q9HAV7 217 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 STX1AQ16623 288 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 TBC1D10BQ4KMP7 808 aaPredicted RBP19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 CTNNBL1Q8WYA6 563 aaPredicted RBP19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 ZNF277Q9NRM2 450 aaPredicted RBP19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 UBE2HP62256 183 aa19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.38■□□□□ 0.69
SMARCA4-203ENST00000429416 CDK12Q9NYV4 1490 aaPredicted RBP19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 DIP2CQ9Y2E4 1556 aa19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 N4BP3O15049 544 aa19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 NCAPH2Q6IBW4 605 aa19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 GLG1Q92896 1179 aa19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 SPAG5Q96R06 1193 aa19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 TESPA1A2RU30 521 aaPredicted RBP19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 YEATS4O95619 227 aa19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 CYP19A1P11511 503 aaPredicted RBP19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 PSMA7O14818 248 aa19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 SORBS3O60504 671 aa19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 SPATA31A1Q5TZJ5 1347 aa19.37■□□□□ 0.69
SMARCA4-203ENST00000429416 KDM4FA0A1W2PPD8 638 aa19.36■□□□□ 0.69
SMARCA4-203ENST00000429416 ANKRD62A6NC57 917 aa19.36■□□□□ 0.69
SMARCA4-203ENST00000429416 CTNNA2P26232 953 aa19.36■□□□□ 0.69
SMARCA4-203ENST00000429416 CIAO1O76071 339 aa19.36■□□□□ 0.69
SMARCA4-203ENST00000429416 GDF11O95390 407 aa19.36■□□□□ 0.69
SMARCA4-203ENST00000429416 DPP9Q86TI2 863 aa19.36■□□□□ 0.69
SMARCA4-203ENST00000429416 F13A1P00488 732 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms