RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 CDC25AP30304 524 aa14.31□□□□□ -0.12
CDH3-202ENST00000429102 BRAPQ7Z569 592 aa14.31□□□□□ -0.12
CDH3-202ENST00000429102 PLIN2Q99541 437 aa14.31□□□□□ -0.12
CDH3-202ENST00000429102 SALL1Q9NSC2 1324 aa14.31□□□□□ -0.12
CDH3-202ENST00000429102 BAZ2BQ9UIF8 2168 aaKnown RBP14.31□□□□□ -0.12
CDH3-202ENST00000429102 LRRFIP1Q32MZ4 808 aaKnown RBP14.31□□□□□ -0.12
CDH3-202ENST00000429102 AKAP2Q9Y2D5 859 aa14.31□□□□□ -0.12
CDH3-202ENST00000429102 ANKARQ7Z5J8 1434 aa14.31□□□□□ -0.12
CDH3-202ENST00000429102 RANBP6O60518 1105 aaKnown RBP14.3□□□□□ -0.12
CDH3-202ENST00000429102 BMP6P22004 513 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 KIF6Q6ZMV9 814 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 BLZF1Q9H2G9 400 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 RGPD2P0DJD1 1756 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 HEG1Q9ULI3 1381 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 PPARDQ03181 441 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 SDR42E1Q8WUS8 393 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 SMARCE1Q969G3 411 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 EPSTI1Q96J88 318 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 SUGCTQ9HAC7 445 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 VPS54Q9P1Q0 977 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 IMPACTQ9P2X3 320 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 FMN2Q9NZ56 1722 aa14.3□□□□□ -0.12
CDH3-202ENST00000429102 CYP2D7A0A087X1C5 515 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 ANKRD65E5RJM6 399 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 CCDC191Q8NCU4 936 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 CBFA2T2O43439 604 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 ERCC3P19447 782 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 LMAN1P49257 510 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 AKAP17AQ02040 695 aaKnown RBP14.29□□□□□ -0.12
CDH3-202ENST00000429102 PPP2R3AQ06190 1150 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 GABPB1Q06547 395 aaPredicted RBP14.29□□□□□ -0.12
CDH3-202ENST00000429102 FKBP15Q5T1M5 1219 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 KRBA2Q6ZNG9 492 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 UBR1Q8IWV7 1749 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 PLA2G4AP47712 749 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 ZNF174Q15697 407 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 KIF4BQ2VIQ3 1234 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDH3-202ENST00000429102 NBPF3Q9H094 633 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 HSD3B7Q9H2F3 369 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 SEC31BQ9NQW1 1179 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 LRP2BPQ9P2M1 347 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 FHOD1Q9Y613 1164 aa14.29□□□□□ -0.12
CDH3-202ENST00000429102 KIF2AO00139 706 aaPredicted RBP14.28□□□□□ -0.12
CDH3-202ENST00000429102 OAS2P29728 719 aaKnown RBP14.28□□□□□ -0.12
CDH3-202ENST00000429102 KRI1Q8N9T8 703 aaKnown RBP14.28□□□□□ -0.12
CDH3-202ENST00000429102 PDE6AP16499 860 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 HNRNPH2P55795 449 aaKnown RBP14.28□□□□□ -0.12
CDH3-202ENST00000429102 ZNF569Q5MCW4 686 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 VPS16Q9H269 839 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 MAN1B1Q9UKM7 699 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 MEGF6O75095 1541 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 WTIPA6NIX2 430 aaPredicted RBP14.28□□□□□ -0.12
CDH3-202ENST00000429102 IRS4O14654 1257 aaPredicted RBP14.28□□□□□ -0.12
CDH3-202ENST00000429102 POSTNQ15063 836 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 NOM1Q5C9Z4 860 aaKnown RBP14.28□□□□□ -0.12
CDH3-202ENST00000429102 AGXT2Q9BYV1 514 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 INTS13Q9NVM9 706 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 TMOD3Q9NYL9 352 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 TFR2Q9UP52 801 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 SLC4A4Q9Y6R1 1079 aa14.28□□□□□ -0.12
CDH3-202ENST00000429102 ERICH2A1L162 156 aa14.27□□□□□ -0.12
CDH3-202ENST00000429102 ZSCAN12O43309 604 aa14.27□□□□□ -0.12
CDH3-202ENST00000429102 ATL3Q6DD88 541 aa14.27□□□□□ -0.12
CDH3-202ENST00000429102 MFSD6Q6ZSS7 791 aa14.27□□□□□ -0.12
CDH3-202ENST00000429102 PPFIBP1Q86W92 1011 aa14.27□□□□□ -0.12
CDH3-202ENST00000429102 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.12
CDH3-202ENST00000429102 UBN2Q6ZU65 1347 aa14.27□□□□□ -0.12
CDH3-202ENST00000429102 TUBGCP6Q96RT7 1819 aa14.27□□□□□ -0.12
CDH3-202ENST00000429102 ANKRD18BA2A2Z9 1011 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 VWA3AA6NCI4 1184 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 CDKL5O76039 1030 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 TCIRG1Q13488 830 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 VSTM4Q8IW00 320 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 REXO1L1PQ8IX06 675 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 RABEP2Q9H5N1 569 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 CCDC66A2RUB6 948 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 ABL1P00519 1130 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 BCAMP50895 628 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 DHX8Q14562 1220 aaKnown RBP14.27□□□□□ -0.13
CDH3-202ENST00000429102 TRIM65Q6PJ69 517 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 CSRNP2Q9H175 543 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 PLEKHA4Q9H4M7 779 aa14.27□□□□□ -0.13
CDH3-202ENST00000429102 PSDA5PKW4 1024 aaPredicted RBP14.26□□□□□ -0.13
CDH3-202ENST00000429102 SH2B2O14492 632 aaPredicted RBP14.26□□□□□ -0.13
CDH3-202ENST00000429102 SASH3O75995 380 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 RTN1Q16799 776 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 MPHOSPH8Q99549 860 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 PARD6BQ9BYG5 372 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 MRPL44Q9H9J2 332 aaKnown RBP14.26□□□□□ -0.13
CDH3-202ENST00000429102 SYCP1Q15431 976 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 ACRBPQ8NEB7 543 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 CDC5LQ99459 802 aaKnown RBP14.26□□□□□ -0.13
CDH3-202ENST00000429102 ZMYM6O95789 1325 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 ZFYP08048 801 aaPredicted RBP14.26□□□□□ -0.13
CDH3-202ENST00000429102 FAM193AP78312 1265 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 WTAPQ15007 396 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 CCDC24Q8N4L8 307 aa14.26□□□□□ -0.13
CDH3-202ENST00000429102 TIGD1Q96MW7 591 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms