RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 COL2A1P02458 1487 aaPredicted RBP30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 THSD7BQ9C0I4 1608 aa30.44■■■□□ 2.46
HERPUD2-205ENST00000427455 DYNLL1P63167 89 aaKnown RBP30.43■■■□□ 2.46
HERPUD2-205ENST00000427455 ZFPM1Q8IX07 1006 aa30.43■■■□□ 2.46
HERPUD2-205ENST00000427455 FZD1Q9UP38 647 aa30.43■■■□□ 2.46
HERPUD2-205ENST00000427455 WDR33Q9C0J8 1336 aaKnown RBP30.43■■■□□ 2.46
HERPUD2-205ENST00000427455 AK9Q5TCS8 1911 aa30.42■■■□□ 2.46
HERPUD2-205ENST00000427455 IREB2P48200 963 aaKnown RBP30.42■■■□□ 2.46
HERPUD2-205ENST00000427455 ATRNL1Q5VV63 1379 aa30.41■■■□□ 2.46
HERPUD2-205ENST00000427455 OTOFQ9HC10 1997 aa30.41■■■□□ 2.46
HERPUD2-205ENST00000427455 UBE3CQ15386 1083 aa30.41■■■□□ 2.46
HERPUD2-205ENST00000427455 LDLRAD1Q5T700 205 aa30.41■■■□□ 2.46
HERPUD2-205ENST00000427455 DCAF15Q66K64 600 aa30.41■■■□□ 2.46
HERPUD2-205ENST00000427455 MAGEB6P1A0A0J9YX57 407 aa30.4■■■□□ 2.46
HERPUD2-205ENST00000427455 USP2O75604 605 aaPredicted RBP30.4■■■□□ 2.46
HERPUD2-205ENST00000427455 ZNF157P51786 506 aaPredicted RBP30.4■■■□□ 2.46
HERPUD2-205ENST00000427455 GRM1Q13255 1194 aa30.4■■■□□ 2.46
HERPUD2-205ENST00000427455 ZSCAN29Q8IWY8 852 aaPredicted RBP30.4■■■□□ 2.46
HERPUD2-205ENST00000427455 JMYQ8N9B5 988 aa30.4■■■□□ 2.46
HERPUD2-205ENST00000427455 CSRNP1Q96S65 589 aa30.4■■■□□ 2.46
HERPUD2-205ENST00000427455 RIOK1Q9BRS2 568 aaKnown RBP30.4■■■□□ 2.46
HERPUD2-205ENST00000427455 OSBPL5Q9H0X9 879 aaPredicted RBP30.4■■■□□ 2.46
HERPUD2-205ENST00000427455 UNCXA6NJT0 531 aa30.39■■■□□ 2.46
HERPUD2-205ENST00000427455 CCDC102AQ96A19 550 aa30.39■■■□□ 2.46
HERPUD2-205ENST00000427455 FLT1P17948 1338 aa30.39■■■□□ 2.46
HERPUD2-205ENST00000427455 LRRFIP1Q32MZ4 808 aaKnown RBP30.38■■■□□ 2.45
HERPUD2-205ENST00000427455 SH3BP5LQ7L8J4 393 aa30.38■■■□□ 2.45
HERPUD2-205ENST00000427455 PLEKHM2Q8IWE5 1019 aa30.38■■■□□ 2.45
HERPUD2-205ENST00000427455 TGFBRAP1Q8WUH2 860 aa30.38■■■□□ 2.45
HERPUD2-205ENST00000427455 SLC10A3P09131 477 aa30.37■■■□□ 2.45
HERPUD2-205ENST00000427455 RASAL3Q86YV0 1011 aa30.37■■■□□ 2.45
HERPUD2-205ENST00000427455 OSBPL3Q9H4L5 887 aa30.37■■■□□ 2.45
HERPUD2-205ENST00000427455 DDTLA6NHG4 134 aaPredicted RBP30.36■■■□□ 2.45
HERPUD2-205ENST00000427455 ZFYP08048 801 aaPredicted RBP30.36■■■□□ 2.45
HERPUD2-205ENST00000427455 MAPKAPK5Q8IW41 473 aa30.36■■■□□ 2.45
HERPUD2-205ENST00000427455 ANKRD13AQ8IZ07 590 aa30.36■■■□□ 2.45
HERPUD2-205ENST00000427455 PCNTO95613 3336 aa30.35■■■□□ 2.45
HERPUD2-205ENST00000427455 FAM155AB1AL88 458 aaPredicted RBP30.35■■■□□ 2.45
HERPUD2-205ENST00000427455 CHGBP05060 677 aa30.35■■■□□ 2.45
HERPUD2-205ENST00000427455 NOGQ13253 232 aa30.35■■■□□ 2.45
HERPUD2-205ENST00000427455 SLFNL1Q499Z3 407 aa30.35■■■□□ 2.45
HERPUD2-205ENST00000427455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.35■■■□□ 2.45
HERPUD2-205ENST00000427455 FSD1Q9BTV5 496 aa30.35■■■□□ 2.45
HERPUD2-205ENST00000427455 ZNF341Q9BYN7 854 aa30.35■■■□□ 2.45
HERPUD2-205ENST00000427455 USP5P45974 858 aa30.34■■■□□ 2.45
HERPUD2-205ENST00000427455 MIGA2Q7L4E1 593 aa30.34■■■□□ 2.45
HERPUD2-205ENST00000427455 LCORLQ8N3X6 602 aa30.34■■■□□ 2.45
HERPUD2-205ENST00000427455 CRNKL1Q9BZJ0 848 aaKnown RBP30.34■■■□□ 2.45
HERPUD2-205ENST00000427455 RNF113AO15541 343 aaKnown RBP30.33■■■□□ 2.45
HERPUD2-205ENST00000427455 MBD4O95243 580 aa30.33■■■□□ 2.45
HERPUD2-205ENST00000427455 EVI5LQ96CN4 794 aa30.33■■■□□ 2.45
HERPUD2-205ENST00000427455 CLMNQ96JQ2 1002 aa30.33■■■□□ 2.45
HERPUD2-205ENST00000427455 WRNIP1Q96S55 665 aa30.33■■■□□ 2.45
HERPUD2-205ENST00000427455 DHX36Q9H2U1 1008 aaKnown RBP30.33■■■□□ 2.45
HERPUD2-205ENST00000427455 NAV1Q8NEY1 1877 aa30.33■■■□□ 2.45
HERPUD2-205ENST00000427455 DDX60LQ5H9U9 1706 aaKnown RBP30.33■■■□□ 2.45
HERPUD2-205ENST00000427455 AOC2O75106 756 aa30.32■■■□□ 2.44
HERPUD2-205ENST00000427455 MAP2K2P36507 400 aa30.32■■■□□ 2.44
HERPUD2-205ENST00000427455 MAP3K9P80192 1104 aa30.32■■■□□ 2.44
HERPUD2-205ENST00000427455 APPBP2Q92624 585 aa30.32■■■□□ 2.44
HERPUD2-205ENST00000427455 ARMT1Q9H993 441 aa30.32■■■□□ 2.44
HERPUD2-205ENST00000427455 PDE4AP27815 886 aa30.31■■■□□ 2.44
HERPUD2-205ENST00000427455 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.31■■■□□ 2.44
HERPUD2-205ENST00000427455 CENPQQ7L2Z9 268 aaPredicted RBP30.31■■■□□ 2.44
HERPUD2-205ENST00000427455 AIDAQ96BJ3 306 aa30.31■■■□□ 2.44
HERPUD2-205ENST00000427455 CSADQ9Y600 493 aa30.31■■■□□ 2.44
HERPUD2-205ENST00000427455 MYH1P12882 1939 aa30.3■■■□□ 2.44
HERPUD2-205ENST00000427455 MAP3K10Q02779 954 aa30.3■■■□□ 2.44
HERPUD2-205ENST00000427455 VGLL4Q14135 290 aa30.3■■■□□ 2.44
HERPUD2-205ENST00000427455 SLC10A4Q96EP9 437 aa30.3■■■□□ 2.44
HERPUD2-205ENST00000427455 PUS7LQ9H0K6 701 aaKnown RBP30.3■■■□□ 2.44
HERPUD2-205ENST00000427455 SIPA1L1O43166 1804 aa30.3■■■□□ 2.44
HERPUD2-205ENST00000427455 ZNF112Q9UJU3 913 aa30.29■■■□□ 2.44
HERPUD2-205ENST00000427455 TBC1D12O60347 775 aa30.28■■■□□ 2.44
HERPUD2-205ENST00000427455 PI4KBQ9UBF8 816 aa30.28■■■□□ 2.44
HERPUD2-205ENST00000427455 SAP30BPQ9UHR5 308 aaKnown RBP30.28■■■□□ 2.44
HERPUD2-205ENST00000427455 PALD1Q9ULE6 856 aa30.28■■■□□ 2.44
HERPUD2-205ENST00000427455 TRIM6-TRIM34B2RNG4 842 aa30.27■■■□□ 2.44
HERPUD2-205ENST00000427455 HLA-DOAP06340 250 aa30.27■■■□□ 2.44
HERPUD2-205ENST00000427455 TICAM2Q86XR7 235 aa30.27■■■□□ 2.44
HERPUD2-205ENST00000427455 OSBP2Q969R2 916 aa30.27■■■□□ 2.44
HERPUD2-205ENST00000427455 ELP3Q9H9T3 547 aa30.27■■■□□ 2.44
HERPUD2-205ENST00000427455 HERC5Q9UII4 1024 aaKnown RBP30.27■■■□□ 2.44
HERPUD2-205ENST00000427455 ZBTB48P10074 688 aaPredicted RBP30.26■■■□□ 2.43
HERPUD2-205ENST00000427455 SPRYD7Q5W111 196 aa30.26■■■□□ 2.43
HERPUD2-205ENST00000427455 SDR42E1Q8WUS8 393 aa30.26■■■□□ 2.43
HERPUD2-205ENST00000427455 ZKSCAN4Q969J2 545 aaPredicted RBP30.26■■■□□ 2.43
HERPUD2-205ENST00000427455 WNK4Q96J92 1243 aa30.26■■■□□ 2.43
HERPUD2-205ENST00000427455 CCDC136Q96JN2 1154 aa30.26■■■□□ 2.43
HERPUD2-205ENST00000427455 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.26■■■□□ 2.43
HERPUD2-205ENST00000427455 SNCAIPQ9Y6H5 919 aa30.26■■■□□ 2.43
HERPUD2-205ENST00000427455 INPP5BP32019 993 aa30.25■■■□□ 2.43
HERPUD2-205ENST00000427455 MAP2K1Q02750 393 aaPredicted RBP30.25■■■□□ 2.43
HERPUD2-205ENST00000427455 ZIC5Q96T25 663 aa30.25■■■□□ 2.43
HERPUD2-205ENST00000427455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.25■■■□□ 2.43
HERPUD2-205ENST00000427455 LAMB1P07942 1786 aa30.25■■■□□ 2.43
HERPUD2-205ENST00000427455 PHF20L1A8MW92 1017 aa30.24■■■□□ 2.43
HERPUD2-205ENST00000427455 KIF23Q02241 960 aaPredicted RBP30.24■■■□□ 2.43
HERPUD2-205ENST00000427455 ZMYM1Q5SVZ6 1142 aa30.24■■■□□ 2.43
HERPUD2-205ENST00000427455 NOL9Q5SY16 702 aaKnown RBP30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms