RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 RUFY3Q7L099 469 aa16.07■□□□□ 0.16
PTPN13-203ENST00000427191 RFC4P35249 363 aa16.07■□□□□ 0.16
PTPN13-203ENST00000427191 F6X3S4 739 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 GRM8O00222 908 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 ARHGAP6O43182 974 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 RASA3Q14644 834 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 DCAF17Q5H9S7 520 aaPredicted RBP16.06■□□□□ 0.16
PTPN13-203ENST00000427191 SDCCAG3Q96C92 435 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 KRT5P13647 590 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 BRDTQ58F21 947 aaPredicted RBP16.06■□□□□ 0.16
PTPN13-203ENST00000427191 CCDC89Q8N998 374 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 HAUS1Q96CS2 278 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 LZTS2Q9BRK4 669 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 PFDN6O15212 129 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 CCT6AP40227 531 aaKnown RBP16.06■□□□□ 0.16
PTPN13-203ENST00000427191 TEKT1Q969V4 418 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 ANKRD2Q9GZV1 360 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 C11orf95C9JLR9 678 aaPredicted RBP16.06■□□□□ 0.16
PTPN13-203ENST00000427191 TRIM37O94972 964 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 RAPGEF1Q13905 1077 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 GRK7Q8WTQ7 553 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 HMGB3O15347 200 aaKnown RBP16.06■□□□□ 0.16
PTPN13-203ENST00000427191 ANKRD44Q8N8A2 993 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 MLKLQ8NB16 471 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 CCDC51Q96ER9 411 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 DRC3Q9H069 523 aa16.06■□□□□ 0.16
PTPN13-203ENST00000427191 SUDS3Q9H7L9 328 aaPredicted RBP16.06■□□□□ 0.16
PTPN13-203ENST00000427191 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
PTPN13-203ENST00000427191 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.05■□□□□ 0.16
PTPN13-203ENST00000427191 WDR46O15213 610 aaKnown RBP16.05■□□□□ 0.16
PTPN13-203ENST00000427191 PPANQ9NQ55 473 aaKnown RBP16.05■□□□□ 0.16
PTPN13-203ENST00000427191 ARHGAP4P98171 946 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 ZC3H15Q8WU90 426 aaKnown RBP16.05■□□□□ 0.16
PTPN13-203ENST00000427191 RUNDC3BQ96NL0 473 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 TRIM35Q9UPQ4 493 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 GOLGA8CPA6NN73 597 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 DAPK3O43293 454 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 PDCD2Q16342 344 aaPredicted RBP16.05■□□□□ 0.16
PTPN13-203ENST00000427191 MUM1Q2TAK8 710 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 RBSNQ9H1K0 784 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 HOMER3Q9NSC5 361 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 P4HA1P13674 534 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 SLC12A2P55011 1212 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 MAP2K2P36507 400 aa16.05■□□□□ 0.16
PTPN13-203ENST00000427191 PI4KAP2A4QPH2 592 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 BRD3Q15059 726 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 PI4KAP1Q8N8J0 262 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 WASLO00401 505 aaPredicted RBP16.04■□□□□ 0.16
PTPN13-203ENST00000427191 RNF113AO15541 343 aaKnown RBP16.04■□□□□ 0.16
PTPN13-203ENST00000427191 PARP1P09874 1014 aaKnown RBP16.04■□□□□ 0.16
PTPN13-203ENST00000427191 PRIM1P49642 420 aaKnown RBP16.04■□□□□ 0.16
PTPN13-203ENST00000427191 SLC4A8Q2Y0W8 1093 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 STRN3Q13033 797 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 KARSQ15046 597 aaKnown RBP16.04■□□□□ 0.16
PTPN13-203ENST00000427191 MIS12Q9H081 205 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 AOX1Q06278 1338 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 HELLSQ9NRZ9 838 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 TRAF5O00463 557 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 HSPA8P11142 646 aaKnown RBP16.04■□□□□ 0.16
PTPN13-203ENST00000427191 HIP1RO75146 1068 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 TBC1D8BQ0IIM8 1120 aa16.04■□□□□ 0.16
PTPN13-203ENST00000427191 UTP14CQ5TAP6 766 aaKnown RBP16.04■□□□□ 0.16
PTPN13-203ENST00000427191 TYW1Q9NV66 732 aaKnown RBP16.04■□□□□ 0.16
PTPN13-203ENST00000427191 ZFYVE9O95405 1425 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 DEXIO95424 95 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 HOXA7P31268 230 aaPredicted RBP16.03■□□□□ 0.16
PTPN13-203ENST00000427191 TNNI2P48788 182 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 MBIPQ9NS73 344 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 KLHL14Q9P2G3 628 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 DBN1Q16643 649 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 TMEM87BQ96K49 555 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 BIRC3Q13489 604 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 ASIC3Q9UHC3 531 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 HOOK2Q96ED9 719 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 SETDB2Q96T68 719 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 PPP1R21Q6ZMI0 780 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 IWS1Q96ST2 819 aa16.03■□□□□ 0.16
PTPN13-203ENST00000427191 NUP160Q12769 1436 aa16.02■□□□□ 0.16
PTPN13-203ENST00000427191 NESP48681 1621 aa16.02■□□□□ 0.16
PTPN13-203ENST00000427191 APBA1Q02410 837 aa16.02■□□□□ 0.16
PTPN13-203ENST00000427191 SLC9C2Q5TAH2 1124 aa16.02■□□□□ 0.16
PTPN13-203ENST00000427191 DPH6Q7L8W6 267 aa16.02■□□□□ 0.16
PTPN13-203ENST00000427191 GTF3C6Q969F1 213 aa16.02■□□□□ 0.16
PTPN13-203ENST00000427191 MED4Q9NPJ6 270 aa16.02■□□□□ 0.16
PTPN13-203ENST00000427191 ZNF277Q9NRM2 450 aaPredicted RBP16.02■□□□□ 0.16
PTPN13-203ENST00000427191 CTNND2Q9UQB3 1225 aa16.02■□□□□ 0.16
PTPN13-203ENST00000427191 GOLGA8KD6RF30 607 aa16.02■□□□□ 0.15
PTPN13-203ENST00000427191 NLRP3Q96P20 1036 aa16.02■□□□□ 0.15
PTPN13-203ENST00000427191 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.02■□□□□ 0.15
PTPN13-203ENST00000427191 ABCC5O15440 1437 aa16.02■□□□□ 0.15
PTPN13-203ENST00000427191 SEPT10Q9P0V9 454 aa16.02■□□□□ 0.15
PTPN13-203ENST00000427191 RPRD2Q5VT52 1461 aaKnown RBP16.02■□□□□ 0.15
PTPN13-203ENST00000427191 ATP8B2P98198 1209 aa16.02■□□□□ 0.15
PTPN13-203ENST00000427191 PAK1Q13153 545 aa16.02■□□□□ 0.15
PTPN13-203ENST00000427191 THUMPD2Q9BTF0 503 aaKnown RBP16.02■□□□□ 0.15
PTPN13-203ENST00000427191 RNASELQ05823 741 aaKnown RBP16.01■□□□□ 0.15
PTPN13-203ENST00000427191 MYRIPQ8NFW9 859 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 CUTAO60888 179 aa16.01■□□□□ 0.15
PTPN13-203ENST00000427191 RIOK3O14730 519 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms