RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 HHIPL1Q96JK4 782 aa13.07□□□□□ -0.32
SYNC-204ENST00000426909 PRMT6Q96LA8 375 aaPredicted RBP13.07□□□□□ -0.32
SYNC-204ENST00000426909 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
SYNC-204ENST00000426909 MRIQ9BWK5 157 aa13.07□□□□□ -0.32
SYNC-204ENST00000426909 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
SYNC-204ENST00000426909 GOLIM4O00461 696 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 RNF113AO15541 343 aaKnown RBP13.06□□□□□ -0.32
SYNC-204ENST00000426909 LDHBP07195 334 aaKnown RBP13.06□□□□□ -0.32
SYNC-204ENST00000426909 UQCRFS1P1P0C7P4 283 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 CASTP20810 708 aaKnown RBP13.06□□□□□ -0.32
SYNC-204ENST00000426909 NF2P35240 595 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 TNFAIP1Q13829 316 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 GRIK5Q16478 980 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 ZMYM1Q5SVZ6 1142 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 SPTY2D1Q68D10 685 aaPredicted RBP13.06□□□□□ -0.32
SYNC-204ENST00000426909 ZSCAN25Q6NSZ9 544 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 DLK2Q6UY11 383 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 PAXIP1Q6ZW49 1069 aaPredicted RBP13.06□□□□□ -0.32
SYNC-204ENST00000426909 JMYQ8N9B5 988 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 DSCC1Q9BVC3 393 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 VEZTQ9HBM0 779 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 GBA2Q9HCG7 927 aaPredicted RBP13.06□□□□□ -0.32
SYNC-204ENST00000426909 PDRG1Q9NUG6 133 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
SYNC-204ENST00000426909 PPP2R3BQ9Y5P8 575 aa13.06□□□□□ -0.32
SYNC-204ENST00000426909 PCNTO95613 3336 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 CLRN2A0PK11 232 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 HMGB1P09429 215 aaKnown RBP13.05□□□□□ -0.32
SYNC-204ENST00000426909 ARID4AP29374 1257 aaPredicted RBP13.05□□□□□ -0.32
SYNC-204ENST00000426909 ECE1P42892 770 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 AK2P54819 239 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 HUNKP57058 714 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 FKBP1BP68106 108 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 TTF1Q15361 905 aaPredicted RBP13.05□□□□□ -0.32
SYNC-204ENST00000426909 HHIPL2Q6UWX4 724 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 SPATA5Q8NB90 893 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 EDC3Q96F86 508 aaKnown RBP13.05□□□□□ -0.32
SYNC-204ENST00000426909 ZDHHC15Q96MV8 337 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.05□□□□□ -0.32
SYNC-204ENST00000426909 DEFB129Q9H1M3 183 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 SCAF8Q9UPN6 1271 aaKnown RBP13.05□□□□□ -0.32
SYNC-204ENST00000426909 PCDHAC2Q9Y5I4 1007 aa13.05□□□□□ -0.32
SYNC-204ENST00000426909 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
SYNC-204ENST00000426909 TRAK2O60296 914 aa13.04□□□□□ -0.32
SYNC-204ENST00000426909 PRDX5P30044 214 aa13.04□□□□□ -0.32
SYNC-204ENST00000426909 TNNI2P48788 182 aa13.04□□□□□ -0.32
SYNC-204ENST00000426909 VEGFBP49765 207 aa13.04□□□□□ -0.32
SYNC-204ENST00000426909 SPDYE2Q495Y8 402 aa13.04□□□□□ -0.32
SYNC-204ENST00000426909 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
SYNC-204ENST00000426909 ZNF589Q86UQ0 364 aaPredicted RBP13.04□□□□□ -0.32
SYNC-204ENST00000426909 SLF2Q8IX21 1173 aa13.04□□□□□ -0.32
SYNC-204ENST00000426909 TDRD3Q9H7E2 651 aaKnown RBP13.04□□□□□ -0.32
SYNC-204ENST00000426909 TMOD2Q9NZR1 351 aa13.04□□□□□ -0.32
SYNC-204ENST00000426909 ABCF2Q9UG63 623 aa13.04□□□□□ -0.32
SYNC-204ENST00000426909 WDR33Q9C0J8 1336 aaKnown RBP13.04□□□□□ -0.32
SYNC-204ENST00000426909 BAG4O95429 457 aaKnown RBP13.03□□□□□ -0.32
SYNC-204ENST00000426909 DZIP1Q86YF9 867 aaKnown RBP13.03□□□□□ -0.32
SYNC-204ENST00000426909 CAPNS2Q96L46 248 aa13.03□□□□□ -0.32
SYNC-204ENST00000426909 ZNF70Q9UC06 446 aaPredicted RBP13.03□□□□□ -0.32
SYNC-204ENST00000426909 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.32
SYNC-204ENST00000426909 BRD1O95696 1058 aa13.02□□□□□ -0.33
SYNC-204ENST00000426909 RPS6KB1P23443 525 aa13.02□□□□□ -0.33
SYNC-204ENST00000426909 MCAMP43121 646 aa13.02□□□□□ -0.33
SYNC-204ENST00000426909 GRM1Q13255 1194 aa13.02□□□□□ -0.33
SYNC-204ENST00000426909 TTLL12Q14166 644 aaPredicted RBP13.02□□□□□ -0.33
SYNC-204ENST00000426909 SUPT20HL1Q3ZLR7 823 aa13.02□□□□□ -0.33
SYNC-204ENST00000426909 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.33
SYNC-204ENST00000426909 CYP4F22Q6NT55 531 aa13.02□□□□□ -0.33
SYNC-204ENST00000426909 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.33
SYNC-204ENST00000426909 APPBP2Q92624 585 aa13.02□□□□□ -0.33
SYNC-204ENST00000426909 CTNNA3Q9UI47 895 aa13.02□□□□□ -0.33
SYNC-204ENST00000426909 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
SYNC-204ENST00000426909 MYH7P12883 1935 aa13.01□□□□□ -0.33
SYNC-204ENST00000426909 POLR2AP24928 1970 aaKnown RBP13.01□□□□□ -0.33
SYNC-204ENST00000426909 GSTO1P78417 241 aa13.01□□□□□ -0.33
SYNC-204ENST00000426909 RASA3Q14644 834 aa13.01□□□□□ -0.33
SYNC-204ENST00000426909 DIXDC1Q155Q3 683 aa13.01□□□□□ -0.33
SYNC-204ENST00000426909 ADCK5Q3MIX3 580 aa13.01□□□□□ -0.33
SYNC-204ENST00000426909 FKBP1CQ5VVH2 108 aa13.01□□□□□ -0.33
SYNC-204ENST00000426909 RGMBQ6NW40 437 aa13.01□□□□□ -0.33
SYNC-204ENST00000426909 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
SYNC-204ENST00000426909 CHMP4CQ96CF2 233 aa13.01□□□□□ -0.33
SYNC-204ENST00000426909 DAGLAQ9Y4D2 1042 aa13.01□□□□□ -0.33
SYNC-204ENST00000426909 TCP10L2B9ZVM9 353 aa13□□□□□ -0.33
SYNC-204ENST00000426909 IGSF3O75054 1194 aa13□□□□□ -0.33
SYNC-204ENST00000426909 ZNF157P51786 506 aaPredicted RBP13□□□□□ -0.33
SYNC-204ENST00000426909 ARMC9Q7Z3E5 817 aa13□□□□□ -0.33
SYNC-204ENST00000426909 CCDC102AQ96A19 550 aa13□□□□□ -0.33
SYNC-204ENST00000426909 NEK1Q96PY6 1258 aa13□□□□□ -0.33
SYNC-204ENST00000426909 RAI14Q9P0K7 980 aa13□□□□□ -0.33
SYNC-204ENST00000426909 LRP2BPQ9P2M1 347 aa13□□□□□ -0.33
SYNC-204ENST00000426909 NDUFB9Q9Y6M9 179 aa13□□□□□ -0.33
SYNC-204ENST00000426909 AKAP11Q9UKA4 1901 aa13□□□□□ -0.33
SYNC-204ENST00000426909 MROH7-TTC4A0A0A0MT08 1334 aa12.99□□□□□ -0.33
SYNC-204ENST00000426909 PPP1R12BO60237 982 aaPredicted RBP12.99□□□□□ -0.33
SYNC-204ENST00000426909 HSPD1P10809 573 aaKnown RBP12.99□□□□□ -0.33
SYNC-204ENST00000426909 MAP2K2P36507 400 aa12.99□□□□□ -0.33
SYNC-204ENST00000426909 ZAP70P43403 619 aa12.99□□□□□ -0.33
SYNC-204ENST00000426909 MAP2K1Q02750 393 aaPredicted RBP12.99□□□□□ -0.33
SYNC-204ENST00000426909 MECOMQ03112 1051 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms