RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 VPS37DQ86XT2 251 aa9.1□□□□□ -0.95
LINC01049-201ENST00000426840 SULF1Q8IWU6 871 aa9.1□□□□□ -0.95
LINC01049-201ENST00000426840 SMC5Q8IY18 1101 aa9.1□□□□□ -0.95
LINC01049-201ENST00000426840 CLASRPQ8N2M8 674 aaKnown RBP9.1□□□□□ -0.95
LINC01049-201ENST00000426840 CERS5Q8N5B7 392 aa9.1□□□□□ -0.95
LINC01049-201ENST00000426840 AGBL3Q8NEM8 1001 aa9.1□□□□□ -0.95
LINC01049-201ENST00000426840 GCC1Q96CN9 775 aa9.1□□□□□ -0.95
LINC01049-201ENST00000426840 TLR7Q9NYK1 1049 aaKnown RBP9.1□□□□□ -0.95
LINC01049-201ENST00000426840 GPRC5DQ9NZD1 345 aa9.1□□□□□ -0.95
LINC01049-201ENST00000426840 CNOT7Q9UIV1 285 aaKnown RBP9.1□□□□□ -0.95
LINC01049-201ENST00000426840 PCDHB3Q9Y5E6 796 aa9.1□□□□□ -0.95
LINC01049-201ENST00000426840 ZNF609O15014 1411 aa9.1□□□□□ -0.95
LINC01049-201ENST00000426840 PSME4Q14997 1843 aa9.1□□□□□ -0.95
LINC01049-201ENST00000426840 WDR90Q96KV7 1748 aa9.09□□□□□ -0.95
LINC01049-201ENST00000426840 SHTN1A0MZ66 631 aa9.09□□□□□ -0.95
LINC01049-201ENST00000426840 RPS12P25398 132 aaKnown RBP9.09□□□□□ -0.95
LINC01049-201ENST00000426840 ARID4AP29374 1257 aaPredicted RBP9.09□□□□□ -0.95
LINC01049-201ENST00000426840 KCNC4Q03721 635 aa9.09□□□□□ -0.95
LINC01049-201ENST00000426840 SCARF1Q14162 830 aa9.09□□□□□ -0.95
LINC01049-201ENST00000426840 GRIK5Q16478 980 aa9.09□□□□□ -0.95
LINC01049-201ENST00000426840 GORABQ5T7V8 394 aa9.09□□□□□ -0.95
LINC01049-201ENST00000426840 C16orf71Q8IYS4 520 aaPredicted RBP9.09□□□□□ -0.95
LINC01049-201ENST00000426840 ZNF512BQ96KM6 892 aaPredicted RBP9.09□□□□□ -0.95
LINC01049-201ENST00000426840 PRR14Q9BWN1 585 aa9.09□□□□□ -0.95
LINC01049-201ENST00000426840 GPBP1L1Q9HC44 474 aaPredicted RBP9.09□□□□□ -0.95
LINC01049-201ENST00000426840 GNL3LQ9NVN8 582 aaKnown RBP9.09□□□□□ -0.95
LINC01049-201ENST00000426840 HMG20BQ9P0W2 317 aa9.09□□□□□ -0.95
LINC01049-201ENST00000426840 JAG2Q9Y219 1238 aa9.09□□□□□ -0.95
LINC01049-201ENST00000426840 ZNF646O15015 1829 aaPredicted RBP9.09□□□□□ -0.95
LINC01049-201ENST00000426840 FRAT2O75474 233 aaPredicted RBP9.08□□□□□ -0.96
LINC01049-201ENST00000426840 ITGBL1O95965 494 aaPredicted RBP9.08□□□□□ -0.96
LINC01049-201ENST00000426840 UQCRFS1P1P0C7P4 283 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 CLCN1P35523 988 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 ZNF280AP59817 542 aaPredicted RBP9.08□□□□□ -0.96
LINC01049-201ENST00000426840 CHAF1AQ13111 956 aaPredicted RBP9.08□□□□□ -0.96
LINC01049-201ENST00000426840 RASGRF1Q13972 1273 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 CCDC158Q5M9N0 1113 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 ANKRD45Q5TZF3 282 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 BLOC1S3Q6QNY0 202 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 ZNF516Q92618 1163 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 REPIN1Q9BWE0 567 aaKnown RBP9.08□□□□□ -0.96
LINC01049-201ENST00000426840 TAF1DQ9H5J8 278 aaPredicted RBP9.08□□□□□ -0.96
LINC01049-201ENST00000426840 GPCPD1Q9NPB8 672 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 HACL1Q9UJ83 578 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 DENND2AQ9ULE3 1009 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 ARAP2Q8WZ64 1704 aa9.08□□□□□ -0.96
LINC01049-201ENST00000426840 MYO3BQ8WXR4 1341 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 IQCA1LA6NCM1 817 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 H7C1D1 291 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 TRIM66O15016 1216 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 ACTN4O43707 911 aaKnown RBP9.07□□□□□ -0.96
LINC01049-201ENST00000426840 IFIT2P09913 472 aaKnown RBP9.07□□□□□ -0.96
LINC01049-201ENST00000426840 USP17L8P0C7I0 530 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 EPHX2P34913 555 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 MCAMP43121 646 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 HIRAP54198 1017 aaPredicted RBP9.07□□□□□ -0.96
LINC01049-201ENST00000426840 PUS10Q3MIT2 529 aaKnown RBP9.07□□□□□ -0.96
LINC01049-201ENST00000426840 MFSD14BQ5SR56 506 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 TTC39AQ5SRH9 613 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 PI16Q6UXB8 463 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 KIAA0825Q8IV33 1275 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 SPATA5Q8NB90 893 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 WDR66Q8TBY9 1149 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 TBC1D22AQ8WUA7 517 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 BCL11AQ9H165 835 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 SNRKQ9NRH2 765 aa9.07□□□□□ -0.96
LINC01049-201ENST00000426840 COL1A1P02452 1464 aaPredicted RBP9.07□□□□□ -0.96
LINC01049-201ENST00000426840 PDS5AQ29RF7 1337 aaKnown RBP9.06□□□□□ -0.96
LINC01049-201ENST00000426840 SALL1Q9NSC2 1324 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 SCN4AP35499 1836 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 AKAP11Q9UKA4 1901 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 EGFRP00533 1210 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 LMOD1P29536 600 aaPredicted RBP9.06□□□□□ -0.96
LINC01049-201ENST00000426840 ZAP70P43403 619 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 MMP14P50281 582 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 NUCB1Q02818 461 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 B4GALNT3Q6L9W6 998 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 TRPM4Q8TD43 1214 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 OTUD7AQ8TE49 926 aaPredicted RBP9.06□□□□□ -0.96
LINC01049-201ENST00000426840 MRIQ9BWK5 157 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 IL21Q9HBE4 155 aa9.06□□□□□ -0.96
LINC01049-201ENST00000426840 ADARB2Q9NS39 739 aaKnown RBP9.06□□□□□ -0.96
LINC01049-201ENST00000426840 SALL3Q9BXA9 1300 aa9.05□□□□□ -0.96
LINC01049-201ENST00000426840 F8W031 263 aaPredicted RBP9.05□□□□□ -0.96
LINC01049-201ENST00000426840 CYP2E1P05181 493 aaPredicted RBP9.05□□□□□ -0.96
LINC01049-201ENST00000426840 NEFLP07196 543 aa9.05□□□□□ -0.96
LINC01049-201ENST00000426840 ATP5JP18859 108 aa9.05□□□□□ -0.96
LINC01049-201ENST00000426840 PRDX5P30044 214 aa9.05□□□□□ -0.96
LINC01049-201ENST00000426840 TBC1D10BQ4KMP7 808 aaPredicted RBP9.05□□□□□ -0.96
LINC01049-201ENST00000426840 TBC1D9Q6ZT07 1266 aa9.05□□□□□ -0.96
LINC01049-201ENST00000426840 USP50Q70EL3 339 aaPredicted RBP9.05□□□□□ -0.96
LINC01049-201ENST00000426840 PNMA8AQ86V59 439 aaPredicted RBP9.05□□□□□ -0.96
LINC01049-201ENST00000426840 CHD1LQ86WJ1 897 aa9.05□□□□□ -0.96
LINC01049-201ENST00000426840 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.05□□□□□ -0.96
LINC01049-201ENST00000426840 ZBED3Q96IU2 234 aaPredicted RBP9.05□□□□□ -0.96
LINC01049-201ENST00000426840 MYOZ2Q9NPC6 264 aa9.05□□□□□ -0.96
LINC01049-201ENST00000426840 PGAP2Q9UHJ9 254 aa9.05□□□□□ -0.96
LINC01049-201ENST00000426840 TTF2Q9UNY4 1162 aaKnown RBP9.05□□□□□ -0.96
LINC01049-201ENST00000426840 SUGT1Q9Y2Z0 365 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms