RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 SH3BP5LQ7L8J4 393 aa16.64■□□□□ 0.25
SNX3-204ENST00000426155 ANKRD13AQ8IZ07 590 aa16.64■□□□□ 0.25
SNX3-204ENST00000426155 SLC10A4Q96EP9 437 aa16.64■□□□□ 0.25
SNX3-204ENST00000426155 EDC3Q96F86 508 aaKnown RBP16.64■□□□□ 0.25
SNX3-204ENST00000426155 WNK4Q96J92 1243 aa16.64■□□□□ 0.25
SNX3-204ENST00000426155 IDI2Q9BXS1 227 aa16.64■□□□□ 0.25
SNX3-204ENST00000426155 LRRCC1Q9C099 1032 aa16.64■□□□□ 0.25
SNX3-204ENST00000426155 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.25
SNX3-204ENST00000426155 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
SNX3-204ENST00000426155 SH3RF3Q8TEJ3 882 aaPredicted RBP16.63■□□□□ 0.25
SNX3-204ENST00000426155 ZKSCAN4Q969J2 545 aaPredicted RBP16.63■□□□□ 0.25
SNX3-204ENST00000426155 WRNIP1Q96S55 665 aa16.63■□□□□ 0.25
SNX3-204ENST00000426155 DNAJC2Q99543 621 aaKnown RBP16.63■□□□□ 0.25
SNX3-204ENST00000426155 DCTPP1Q9H773 170 aa16.63■□□□□ 0.25
SNX3-204ENST00000426155 RNF186Q9NXI6 227 aa16.63■□□□□ 0.25
SNX3-204ENST00000426155 AATFQ9NY61 560 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNX3-204ENST00000426155 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
SNX3-204ENST00000426155 MYH1P12882 1939 aa16.62■□□□□ 0.25
SNX3-204ENST00000426155 DDTLA6NHG4 134 aaPredicted RBP16.62■□□□□ 0.25
SNX3-204ENST00000426155 TRPA1O75762 1119 aa16.62■□□□□ 0.25
SNX3-204ENST00000426155 LDHCP07864 332 aa16.62■□□□□ 0.25
SNX3-204ENST00000426155 SNCAIPQ9Y6H5 919 aa16.62■□□□□ 0.25
SNX3-204ENST00000426155 NAV1Q8NEY1 1877 aa16.62■□□□□ 0.25
SNX3-204ENST00000426155 DDX60LQ5H9U9 1706 aaKnown RBP16.62■□□□□ 0.25
SNX3-204ENST00000426155 GOLIM4O00461 696 aa16.61■□□□□ 0.25
SNX3-204ENST00000426155 ENTPD3O75355 529 aa16.61■□□□□ 0.25
SNX3-204ENST00000426155 INPP5BP32019 993 aa16.61■□□□□ 0.25
SNX3-204ENST00000426155 DYNLL1P63167 89 aaKnown RBP16.61■□□□□ 0.25
SNX3-204ENST00000426155 ZSCAN29Q8IWY8 852 aaPredicted RBP16.61■□□□□ 0.25
SNX3-204ENST00000426155 TEX11Q8IYF3 940 aa16.61■□□□□ 0.25
SNX3-204ENST00000426155 MAGEB6Q8N7X4 407 aa16.61■□□□□ 0.25
SNX3-204ENST00000426155 OPTNQ96CV9 577 aa16.61■□□□□ 0.25
SNX3-204ENST00000426155 PHIPQ8WWQ0 1821 aa16.61■□□□□ 0.25
SNX3-204ENST00000426155 CYP7A1P22680 504 aa16.6■□□□□ 0.25
SNX3-204ENST00000426155 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
SNX3-204ENST00000426155 TSHZ3Q63HK5 1081 aa16.6■□□□□ 0.25
SNX3-204ENST00000426155 DCAF15Q66K64 600 aa16.6■□□□□ 0.25
SNX3-204ENST00000426155 MIGA1Q8NAN2 632 aa16.6■□□□□ 0.25
SNX3-204ENST00000426155 OTUD5Q96G74 571 aa16.6■□□□□ 0.25
SNX3-204ENST00000426155 ZNF341Q9BYN7 854 aa16.6■□□□□ 0.25
SNX3-204ENST00000426155 BOLA2Q9H3K6 86 aa16.6■□□□□ 0.25
SNX3-204ENST00000426155 PRDM10Q9NQV6 1147 aa16.6■□□□□ 0.25
SNX3-204ENST00000426155 CSADQ9Y600 493 aa16.6■□□□□ 0.25
SNX3-204ENST00000426155 UNCXA6NJT0 531 aa16.59■□□□□ 0.25
SNX3-204ENST00000426155 FAM196BA6NMK8 535 aa16.59■□□□□ 0.25
SNX3-204ENST00000426155 CA12O43570 354 aa16.59■□□□□ 0.25
SNX3-204ENST00000426155 ZBTB48P10074 688 aaPredicted RBP16.59■□□□□ 0.25
SNX3-204ENST00000426155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNX3-204ENST00000426155 NOL10Q9BSC4 688 aaKnown RBP16.59■□□□□ 0.25
SNX3-204ENST00000426155 OSBPL5Q9H0X9 879 aaPredicted RBP16.59■□□□□ 0.25
SNX3-204ENST00000426155 SUPT16HQ9Y5B9 1047 aaKnown RBP16.59■□□□□ 0.25
SNX3-204ENST00000426155 PTPRFP10586 1907 aa16.58■□□□□ 0.25
SNX3-204ENST00000426155 TM4SF4P48230 202 aa16.58■□□□□ 0.24
SNX3-204ENST00000426155 SLFNL1Q499Z3 407 aa16.58■□□□□ 0.24
SNX3-204ENST00000426155 MAPKAPK5Q8IW41 473 aa16.58■□□□□ 0.24
SNX3-204ENST00000426155 EXOC6Q8TAG9 804 aa16.58■□□□□ 0.24
SNX3-204ENST00000426155 HOOK2Q96ED9 719 aa16.58■□□□□ 0.24
SNX3-204ENST00000426155 SAGE1Q9NXZ1 904 aa16.58■□□□□ 0.24
SNX3-204ENST00000426155 COL2A1P02458 1487 aaPredicted RBP16.58■□□□□ 0.24
SNX3-204ENST00000426155 FLT1P17948 1338 aa16.57■□□□□ 0.24
SNX3-204ENST00000426155 IGF2BP3O00425 579 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNX3-204ENST00000426155 TBC1D8O95759 1140 aa16.57■□□□□ 0.24
SNX3-204ENST00000426155 CHGBP05060 677 aa16.57■□□□□ 0.24
SNX3-204ENST00000426155 ATP5JP18859 108 aa16.57■□□□□ 0.24
SNX3-204ENST00000426155 PPP4CP60510 307 aa16.57■□□□□ 0.24
SNX3-204ENST00000426155 SREBF2Q12772 1141 aa16.57■□□□□ 0.24
SNX3-204ENST00000426155 MAP3K12Q12852 859 aa16.57■□□□□ 0.24
SNX3-204ENST00000426155 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
SNX3-204ENST00000426155 TNS4Q8IZW8 715 aa16.57■□□□□ 0.24
SNX3-204ENST00000426155 OTUD7AQ8TE49 926 aaPredicted RBP16.57■□□□□ 0.24
SNX3-204ENST00000426155 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.57■□□□□ 0.24
SNX3-204ENST00000426155 MANSC4A6NHS7 340 aaPredicted RBP16.56■□□□□ 0.24
SNX3-204ENST00000426155 SPDYE5A6NIY4 337 aa16.56■□□□□ 0.24
SNX3-204ENST00000426155 BAG3O95817 575 aa16.56■□□□□ 0.24
SNX3-204ENST00000426155 PDE6AP16499 860 aa16.56■□□□□ 0.24
SNX3-204ENST00000426155 IRX6P78412 446 aaPredicted RBP16.56■□□□□ 0.24
SNX3-204ENST00000426155 SLC4A8Q2Y0W8 1093 aa16.56■□□□□ 0.24
SNX3-204ENST00000426155 TGFBRAP1Q8WUH2 860 aa16.56■□□□□ 0.24
SNX3-204ENST00000426155 HAUS7Q99871 368 aa16.56■□□□□ 0.24
SNX3-204ENST00000426155 R3HDMLQ9H3Y0 253 aa16.56■□□□□ 0.24
SNX3-204ENST00000426155 PAG1Q9NWQ8 432 aa16.56■□□□□ 0.24
SNX3-204ENST00000426155 ZNF112Q9UJU3 913 aa16.56■□□□□ 0.24
SNX3-204ENST00000426155 BAZ2AQ9UIF9 1905 aaKnown RBP16.56■□□□□ 0.24
SNX3-204ENST00000426155 ZNF532Q9HCE3 1301 aa16.55■□□□□ 0.24
SNX3-204ENST00000426155 PHF20L1A8MW92 1017 aa16.55■□□□□ 0.24
SNX3-204ENST00000426155 MAP4K4O95819 1239 aaPredicted RBP16.55■□□□□ 0.24
SNX3-204ENST00000426155 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
SNX3-204ENST00000426155 SLC9C2Q5TAH2 1124 aa16.55■□□□□ 0.24
SNX3-204ENST00000426155 IFNL1Q8IU54 200 aa16.55■□□□□ 0.24
SNX3-204ENST00000426155 MS4A4AQ96JQ5 239 aa16.55■□□□□ 0.24
SNX3-204ENST00000426155 PTPN18Q99952 460 aa16.55■□□□□ 0.24
SNX3-204ENST00000426155 ECHDC1Q9NTX5 307 aa16.55■□□□□ 0.24
SNX3-204ENST00000426155 SAP30BPQ9UHR5 308 aaKnown RBP16.55■□□□□ 0.24
SNX3-204ENST00000426155 TCRBV5S4A2TA0A5A2 114 aa16.54■□□□□ 0.24
SNX3-204ENST00000426155 IRF6O14896 467 aa16.54■□□□□ 0.24
SNX3-204ENST00000426155 PLCG2P16885 1265 aa16.54■□□□□ 0.24
SNX3-204ENST00000426155 CCDC84Q86UT8 332 aaPredicted RBP16.54■□□□□ 0.24
SNX3-204ENST00000426155 ERO1BQ86YB8 467 aa16.54■□□□□ 0.24
SNX3-204ENST00000426155 BRI3BPQ8WY22 251 aa16.54■□□□□ 0.24
SNX3-204ENST00000426155 RIOK1Q9BRS2 568 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms