RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ARHGAP27Q6ZUM4 889 aa9.6□□□□□ -0.87
LINC01040-201ENST00000425048 DUSP23Q9BVJ7 150 aa9.6□□□□□ -0.87
LINC01040-201ENST00000425048 BCO2Q9BYV7 579 aa9.6□□□□□ -0.87
LINC01040-201ENST00000425048 FUT4P22083 530 aa9.59□□□□□ -0.87
LINC01040-201ENST00000425048 IFI16Q16666 785 aaKnown RBP9.59□□□□□ -0.87
LINC01040-201ENST00000425048 SULF2Q8IWU5 870 aa9.59□□□□□ -0.87
LINC01040-201ENST00000425048 EMILIN2Q9BXX0 1053 aa9.59□□□□□ -0.87
LINC01040-201ENST00000425048 AKAP2Q9Y2D5 859 aa9.59□□□□□ -0.87
LINC01040-201ENST00000425048 LEFTY1O75610 366 aa9.58□□□□□ -0.88
LINC01040-201ENST00000425048 ZC3H12AQ5D1E8 599 aaKnown RBP9.58□□□□□ -0.88
LINC01040-201ENST00000425048 PI16Q6UXB8 463 aa9.58□□□□□ -0.88
LINC01040-201ENST00000425048 ATG4DQ86TL0 474 aaPredicted RBP9.58□□□□□ -0.88
LINC01040-201ENST00000425048 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.58□□□□□ -0.88
LINC01040-201ENST00000425048 RNF214Q8ND24 703 aa9.58□□□□□ -0.88
LINC01040-201ENST00000425048 TMEM265A0A087WTH1 108 aa9.57□□□□□ -0.88
LINC01040-201ENST00000425048 NME2P22392 152 aa9.57□□□□□ -0.88
LINC01040-201ENST00000425048 OXCT1P55809 520 aa9.57□□□□□ -0.88
LINC01040-201ENST00000425048 ERVK-24P63145 666 aa9.57□□□□□ -0.88
LINC01040-201ENST00000425048 AOC3Q16853 763 aa9.57□□□□□ -0.88
LINC01040-201ENST00000425048 TMC7Q7Z402 723 aa9.57□□□□□ -0.88
LINC01040-201ENST00000425048 PI4K2BQ8TCG2 481 aa9.57□□□□□ -0.88
LINC01040-201ENST00000425048 STK35Q8TDR2 534 aa9.57□□□□□ -0.88
LINC01040-201ENST00000425048 ISL2Q96A47 359 aa9.57□□□□□ -0.88
LINC01040-201ENST00000425048 ARID1BQ8NFD5 2236 aaPredicted RBP9.57□□□□□ -0.88
LINC01040-201ENST00000425048 SOWAHDA6NJG2 315 aa9.56□□□□□ -0.88
LINC01040-201ENST00000425048 PLCB3Q01970 1234 aa9.56□□□□□ -0.88
LINC01040-201ENST00000425048 MAP1SQ66K74 1059 aaPredicted RBP9.56□□□□□ -0.88
LINC01040-201ENST00000425048 RETREG2Q8NC44 543 aa9.56□□□□□ -0.88
LINC01040-201ENST00000425048 HRASLS5Q96KN8 279 aa9.56□□□□□ -0.88
LINC01040-201ENST00000425048 RC3H2Q9HBD1 1191 aaKnown RBP9.56□□□□□ -0.88
LINC01040-201ENST00000425048 NEFMP07197 916 aa9.55□□□□□ -0.88
LINC01040-201ENST00000425048 RNASE1P07998 156 aaKnown RBP9.55□□□□□ -0.88
LINC01040-201ENST00000425048 JAG1P78504 1218 aa9.55□□□□□ -0.88
LINC01040-201ENST00000425048 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.55□□□□□ -0.88
LINC01040-201ENST00000425048 NXPE4Q6UWF7 544 aa9.55□□□□□ -0.88
LINC01040-201ENST00000425048 ARID3AQ99856 593 aa9.55□□□□□ -0.88
LINC01040-201ENST00000425048 MBNL3Q9NUK0 354 aaKnown RBP9.55□□□□□ -0.88
LINC01040-201ENST00000425048 DCTN4Q9UJW0 460 aa9.55□□□□□ -0.88
LINC01040-201ENST00000425048 CEACAM5P06731 702 aa9.54□□□□□ -0.88
LINC01040-201ENST00000425048 TOP6BLQ8N6T0 577 aa9.54□□□□□ -0.88
LINC01040-201ENST00000425048 GPBAR1Q8TDU6 330 aa9.54□□□□□ -0.88
LINC01040-201ENST00000425048 ACSBG1Q96GR2 724 aa9.54□□□□□ -0.88
LINC01040-201ENST00000425048 CBX8Q9HC52 389 aa9.54□□□□□ -0.88
LINC01040-201ENST00000425048 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
LINC01040-201ENST00000425048 PLAGL2Q9UPG8 496 aa9.54□□□□□ -0.88
LINC01040-201ENST00000425048 SNX11Q9Y5W9 270 aa9.54□□□□□ -0.88
LINC01040-201ENST00000425048 U3KQE9 123 aa9.54□□□□□ -0.88
LINC01040-201ENST00000425048 CARMIL2Q6F5E8 1435 aa9.54□□□□□ -0.88
LINC01040-201ENST00000425048 CD96P40200 585 aa9.53□□□□□ -0.88
LINC01040-201ENST00000425048 ZNF252P-AS1Q0IIN9 211 aa9.52□□□□□ -0.89
LINC01040-201ENST00000425048 DSC3Q14574 896 aa9.52□□□□□ -0.89
LINC01040-201ENST00000425048 ADAMTS6Q9UKP5 1117 aa9.52□□□□□ -0.89
LINC01040-201ENST00000425048 SAMM50Q9Y512 469 aa9.52□□□□□ -0.89
LINC01040-201ENST00000425048 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.52□□□□□ -0.89
LINC01040-201ENST00000425048 PNMA6FA0A0J9YX94 578 aa9.51□□□□□ -0.89
LINC01040-201ENST00000425048 ANGEL2Q5VTE6 544 aaKnown RBP9.51□□□□□ -0.89
LINC01040-201ENST00000425048 TMEM40Q8WWA1 233 aa9.51□□□□□ -0.89
LINC01040-201ENST00000425048 FAM168AQ92567 244 aa9.51□□□□□ -0.89
LINC01040-201ENST00000425048 NECAB3Q96P71 396 aaPredicted RBP9.51□□□□□ -0.89
LINC01040-201ENST00000425048 CACNA2D2Q9NY47 1150 aa9.51□□□□□ -0.89
LINC01040-201ENST00000425048 GTF2IRD1Q9UHL9 959 aa9.51□□□□□ -0.89
LINC01040-201ENST00000425048 ENOX2Q16206 610 aaKnown RBP9.5□□□□□ -0.89
LINC01040-201ENST00000425048 ZNF648Q5T619 568 aaPredicted RBP9.5□□□□□ -0.89
LINC01040-201ENST00000425048 LRRN4CLQ8ND94 238 aa9.5□□□□□ -0.89
LINC01040-201ENST00000425048 HEXIM2Q96MH2 286 aaKnown RBP9.5□□□□□ -0.89
LINC01040-201ENST00000425048 CEP44Q9C0F1 390 aa9.5□□□□□ -0.89
LINC01040-201ENST00000425048 TNKS2Q9H2K2 1166 aa9.5□□□□□ -0.89
LINC01040-201ENST00000425048 IGF2BP3O00425 579 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC01040-201ENST00000425048 TREHO43280 583 aa9.49□□□□□ -0.89
LINC01040-201ENST00000425048 FARP2O94887 1054 aaPredicted RBP9.49□□□□□ -0.89
LINC01040-201ENST00000425048 ITIH2P19823 946 aa9.49□□□□□ -0.89
LINC01040-201ENST00000425048 SLC23A3Q6PIS1 610 aa9.49□□□□□ -0.89
LINC01040-201ENST00000425048 FAM214BQ7L5A3 538 aa9.49□□□□□ -0.89
LINC01040-201ENST00000425048 PICK1Q9NRD5 415 aa9.49□□□□□ -0.89
LINC01040-201ENST00000425048 CSADQ9Y600 493 aa9.49□□□□□ -0.89
LINC01040-201ENST00000425048 BMP6P22004 513 aa9.48□□□□□ -0.89
LINC01040-201ENST00000425048 GSTT1P30711 240 aa9.48□□□□□ -0.89
LINC01040-201ENST00000425048 PPM1JQ5JR12 505 aa9.48□□□□□ -0.89
LINC01040-201ENST00000425048 MPRIPQ6WCQ1 1025 aa9.48□□□□□ -0.89
LINC01040-201ENST00000425048 C3orf58Q8NDZ4 430 aa9.48□□□□□ -0.89
LINC01040-201ENST00000425048 GRIN3AQ8TCU5 1115 aa9.48□□□□□ -0.89
LINC01040-201ENST00000425048 ASB11Q8WXH4 323 aa9.48□□□□□ -0.89
LINC01040-201ENST00000425048 SRCIN1Q9C0H9 1055 aa9.48□□□□□ -0.89
LINC01040-201ENST00000425048 PRDM10Q9NQV6 1147 aa9.48□□□□□ -0.89
LINC01040-201ENST00000425048 GNEQ9Y223 722 aaKnown RBP9.48□□□□□ -0.89
LINC01040-201ENST00000425048 TRIM37O94972 964 aa9.47□□□□□ -0.89
LINC01040-201ENST00000425048 MAPK1P28482 360 aa9.47□□□□□ -0.89
LINC01040-201ENST00000425048 DCDC2CA8MYV0 355 aa9.46□□□□□ -0.9
LINC01040-201ENST00000425048 FANCGO15287 622 aa9.46□□□□□ -0.9
LINC01040-201ENST00000425048 LRRC14Q15048 493 aa9.46□□□□□ -0.9
LINC01040-201ENST00000425048 TPTE2Q6XPS3 522 aa9.46□□□□□ -0.9
LINC01040-201ENST00000425048 CDC37L1Q7L3B6 337 aa9.46□□□□□ -0.9
LINC01040-201ENST00000425048 C12orf40Q86WS4 652 aa9.46□□□□□ -0.9
LINC01040-201ENST00000425048 ENC1O14682 589 aa9.45□□□□□ -0.9
LINC01040-201ENST00000425048 RING1Q06587 406 aa9.45□□□□□ -0.9
LINC01040-201ENST00000425048 LCE1DQ5T752 114 aa9.45□□□□□ -0.9
LINC01040-201ENST00000425048 KCT2Q8NC54 265 aa9.45□□□□□ -0.9
LINC01040-201ENST00000425048 FBF1Q8TES7 1133 aa9.45□□□□□ -0.9
LINC01040-201ENST00000425048 PPM1HQ9ULR3 514 aa9.45□□□□□ -0.9
LINC01040-201ENST00000425048 GIPC1O14908 333 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms