RNA–Protein interactions for RNA: ENST00000423664.5

UBXN11-209, Transcript of UBX domain protein 11, humanhuman

TSL 3

Gene UBXN11, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-209ENST00000423664 GPATCH3Q96I76 525 aa16.61■□□□□ 0.25
UBXN11-209ENST00000423664 RWDD1Q9H446 243 aaPredicted RBP16.61■□□□□ 0.25
UBXN11-209ENST00000423664 KIF23Q02241 960 aaPredicted RBP16.6■□□□□ 0.25
UBXN11-209ENST00000423664 ANKRD45Q5TZF3 282 aa16.6■□□□□ 0.25
UBXN11-209ENST00000423664 TSHZ3Q63HK5 1081 aa16.6■□□□□ 0.25
UBXN11-209ENST00000423664 DCAF15Q66K64 600 aa16.6■□□□□ 0.25
UBXN11-209ENST00000423664 SLC10A4Q96EP9 437 aa16.6■□□□□ 0.25
UBXN11-209ENST00000423664 SIPA1L1O43166 1804 aa16.6■□□□□ 0.25
UBXN11-209ENST00000423664 ATRNL1Q5VV63 1379 aa16.6■□□□□ 0.25
UBXN11-209ENST00000423664 COL2A1P02458 1487 aaPredicted RBP16.6■□□□□ 0.25
UBXN11-209ENST00000423664 DDTLA6NHG4 134 aaPredicted RBP16.59■□□□□ 0.25
UBXN11-209ENST00000423664 IGHDP01880 384 aa16.59■□□□□ 0.25
UBXN11-209ENST00000423664 PDE6AP16499 860 aa16.59■□□□□ 0.25
UBXN11-209ENST00000423664 SLC9C2Q5TAH2 1124 aa16.59■□□□□ 0.25
UBXN11-209ENST00000423664 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.59■□□□□ 0.25
UBXN11-209ENST00000423664 MIGA2Q7L4E1 593 aa16.59■□□□□ 0.25
UBXN11-209ENST00000423664 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
UBXN11-209ENST00000423664 SMC5Q8IY18 1101 aa16.59■□□□□ 0.25
UBXN11-209ENST00000423664 OTUD7AQ8TE49 926 aaPredicted RBP16.59■□□□□ 0.25
UBXN11-209ENST00000423664 CSRNP1Q96S65 589 aa16.59■□□□□ 0.25
UBXN11-209ENST00000423664 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
UBXN11-209ENST00000423664 FOXN1O15353 648 aa16.58■□□□□ 0.24
UBXN11-209ENST00000423664 DYNLL1P63167 89 aaKnown RBP16.58■□□□□ 0.24
UBXN11-209ENST00000423664 MAP3K9P80192 1104 aa16.58■□□□□ 0.24
UBXN11-209ENST00000423664 VGLL4Q14135 290 aa16.58■□□□□ 0.24
UBXN11-209ENST00000423664 SPRYD7Q5W111 196 aa16.58■□□□□ 0.24
UBXN11-209ENST00000423664 MIGA1Q8NAN2 632 aa16.58■□□□□ 0.24
UBXN11-209ENST00000423664 AIDAQ96BJ3 306 aa16.58■□□□□ 0.24
UBXN11-209ENST00000423664 WRNIP1Q96S55 665 aa16.58■□□□□ 0.24
UBXN11-209ENST00000423664 ZNF341Q9BYN7 854 aa16.58■□□□□ 0.24
UBXN11-209ENST00000423664 OSBPL5Q9H0X9 879 aaPredicted RBP16.58■□□□□ 0.24
UBXN11-209ENST00000423664 TTC41PQ6P2S7 1318 aa16.58■□□□□ 0.24
UBXN11-209ENST00000423664 SALL3Q9BXA9 1300 aa16.58■□□□□ 0.24
UBXN11-209ENST00000423664 NAV1Q8NEY1 1877 aa16.57■□□□□ 0.24
UBXN11-209ENST00000423664 ATAD5Q96QE3 1844 aa16.57■□□□□ 0.24
UBXN11-209ENST00000423664 ZNF532Q9HCE3 1301 aa16.57■□□□□ 0.24
UBXN11-209ENST00000423664 TCRBV5S4A2TA0A5A2 114 aa16.57■□□□□ 0.24
UBXN11-209ENST00000423664 MKRN3Q13064 507 aaKnown RBP16.57■□□□□ 0.24
UBXN11-209ENST00000423664 CERS3Q8IU89 383 aa16.57■□□□□ 0.24
UBXN11-209ENST00000423664 PI4K2BQ8TCG2 481 aa16.57■□□□□ 0.24
UBXN11-209ENST00000423664 TGFBRAP1Q8WUH2 860 aa16.57■□□□□ 0.24
UBXN11-209ENST00000423664 WNK4Q96J92 1243 aa16.57■□□□□ 0.24
UBXN11-209ENST00000423664 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.57■□□□□ 0.24
UBXN11-209ENST00000423664 CSADQ9Y600 493 aa16.57■□□□□ 0.24
UBXN11-209ENST00000423664 CASP8AP2Q9UKL3 1982 aa16.57■□□□□ 0.24
UBXN11-209ENST00000423664 BAZ2AQ9UIF9 1905 aaKnown RBP16.57■□□□□ 0.24
UBXN11-209ENST00000423664 DOCK1Q14185 1865 aa16.56■□□□□ 0.24
UBXN11-209ENST00000423664 DDX60LQ5H9U9 1706 aaKnown RBP16.56■□□□□ 0.24
UBXN11-209ENST00000423664 FLT1P17948 1338 aa16.56■□□□□ 0.24
UBXN11-209ENST00000423664 ERC2O15083 957 aa16.56■□□□□ 0.24
UBXN11-209ENST00000423664 ZBTB48P10074 688 aaPredicted RBP16.56■□□□□ 0.24
UBXN11-209ENST00000423664 MX1P20591 662 aa16.56■□□□□ 0.24
UBXN11-209ENST00000423664 ADD2P35612 726 aa16.56■□□□□ 0.24
UBXN11-209ENST00000423664 MAP3K10Q02779 954 aa16.56■□□□□ 0.24
UBXN11-209ENST00000423664 MAPKAPK5Q8IW41 473 aa16.56■□□□□ 0.24
UBXN11-209ENST00000423664 REM2Q8IYK8 340 aaPredicted RBP16.56■□□□□ 0.24
UBXN11-209ENST00000423664 RIOK1Q9BRS2 568 aaKnown RBP16.56■□□□□ 0.24
UBXN11-209ENST00000423664 BEGAINQ9BUH8 593 aa16.56■□□□□ 0.24
UBXN11-209ENST00000423664 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.56■□□□□ 0.241e-6■■■■■ 38.5
UBXN11-209ENST00000423664 ELP3Q9H9T3 547 aa16.56■□□□□ 0.24
UBXN11-209ENST00000423664 ZNF112Q9UJU3 913 aa16.56■□□□□ 0.24
UBXN11-209ENST00000423664 GLRX3O76003 335 aaKnown RBP16.55■□□□□ 0.24
UBXN11-209ENST00000423664 INPP5BP32019 993 aa16.55■□□□□ 0.24
UBXN11-209ENST00000423664 GJA5P36382 358 aa16.55■□□□□ 0.24
UBXN11-209ENST00000423664 SLFNL1Q499Z3 407 aa16.55■□□□□ 0.24
UBXN11-209ENST00000423664 ZKSCAN4Q969J2 545 aaPredicted RBP16.55■□□□□ 0.24
UBXN11-209ENST00000423664 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
UBXN11-209ENST00000423664 SNCAIPQ9Y6H5 919 aa16.55■□□□□ 0.24
UBXN11-209ENST00000423664 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 MAGEB6P1A0A0J9YX57 407 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 PHF20L1A8MW92 1017 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 CA12O43570 354 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 CHGBP05060 677 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 SLURP2P0DP57 97 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 KBTBD3Q8NAB2 608 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 OPTNQ96CV9 577 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 PTPRFP10586 1907 aa16.54■□□□□ 0.24
UBXN11-209ENST00000423664 TBC1D12O60347 775 aa16.53■□□□□ 0.24
UBXN11-209ENST00000423664 HSPA8P11142 646 aaKnown RBP16.53■□□□□ 0.24
UBXN11-209ENST00000423664 TM4SF4P48230 202 aa16.53■□□□□ 0.24
UBXN11-209ENST00000423664 CTCFP49711 727 aaPredicted RBP16.53■□□□□ 0.24
UBXN11-209ENST00000423664 UBE3CQ15386 1083 aa16.53■□□□□ 0.24
UBXN11-209ENST00000423664 DHX36Q9H2U1 1008 aaKnown RBP16.53■□□□□ 0.24
UBXN11-209ENST00000423664 STAP2Q9UGK3 403 aa16.53■□□□□ 0.24
UBXN11-209ENST00000423664 MANSC4A6NHS7 340 aaPredicted RBP16.52■□□□□ 0.24
UBXN11-209ENST00000423664 SPDYE5A6NIY4 337 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 USP5P45974 858 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 PDE1AP54750 535 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 NUCB1Q02818 461 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 SREBF2Q12772 1141 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 NOL9Q5SY16 702 aaKnown RBP16.52■□□□□ 0.24
UBXN11-209ENST00000423664 ZSCAN25Q6NSZ9 544 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 CHD1LQ86WJ1 897 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 ERO1BQ86YB8 467 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 LCORLQ8N3X6 602 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 OTUD5Q96G74 571 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 PI4KBQ9UBF8 816 aa16.52■□□□□ 0.24
UBXN11-209ENST00000423664 PALD1Q9ULE6 856 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms