RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 USHBP1Q8N6Y0 703 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 LRRC45Q96CN5 670 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 CCDC85AQ96PX6 553 aaPredicted RBP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 SLC7A5P2Q9GIP4 190 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 WDR17Q8IZU2 1322 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 USP31Q70CQ4 1352 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 RPS6KA4O75676 772 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 GBP2P32456 591 aaPredicted RBP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 RARSP54136 660 aaKnown RBP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 SPECC1Q5M775 1068 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 STYK1Q6J9G0 422 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 FAM117AQ9C073 453 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 GGNBP2Q9H3C7 697 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 CWC25Q9NXE8 425 aaPredicted RBP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 TTC21BQ7Z4L5 1316 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 C19orf81C9J6K1 198 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 PDE4CQ08493 712 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 ZNF174Q15697 407 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 SULT6B1Q6IMI4 303 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 SIL1Q9H173 461 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 C11orf49Q9H6J7 331 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 RWDD3Q9Y3V2 267 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 PLEKHG1Q9ULL1 1385 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 GOLGA6L4A6NEF3 574 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 EFCAB14O75071 495 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 NR1H3Q13133 447 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 BYSLQ13895 437 aaKnown RBP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 SAFBQ15424 915 aaKnown RBP eCLIP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 PRR23BQ6ZRT6 265 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 DDX1Q92499 740 aaKnown RBP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 IL25Q9H293 177 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 ENTPD7Q9NQZ7 604 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 ZNF215Q9UL58 517 aaPredicted RBP4.13□□□□□ -1.75
TOP2A-201ENST00000423485 SSX2IPQ9Y2D8 614 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 LRBAP50851 2863 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 SLIT1O75093 1534 aa4.13□□□□□ -1.75
TOP2A-201ENST00000423485 FER1L4A9Z1Z3 1794 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 SETD1BQ9UPS6 1966 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 NOS1P29475 1434 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 ERVV-2B6SEH9 535 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 ADCY3O60266 1144 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 RBM25P49756 843 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 FAM193AP78312 1265 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 FOXK2Q01167 660 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 HS2ST1Q7LGA3 356 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 MTERF4Q7Z6M4 381 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 SCG3Q8WXD2 468 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 RNF34Q969K3 372 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 PUS7Q96PZ0 661 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 ELP3Q9H9T3 547 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 GPCPD1Q9NPB8 672 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 STARD7Q9NQZ5 370 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 DOLKQ9UPQ8 538 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 NBPF19A0A087WUL8 3843 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 HMGB1P09429 215 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 FOSBP53539 338 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 RAB3GAP1Q15042 981 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 RRP12Q5JTH9 1297 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 TCP11Q8WWU5 503 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 EPC1Q9H2F5 836 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 SPATA31A3Q5VYP0 1347 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 IBTKQ9P2D0 1353 aaPredicted RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 USP54Q70EL1 1684 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 LAMA4Q16363 1823 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 TYW5A2RUC4 315 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 DKC1O60832 514 aaKnown RBP eCLIP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 CCDC144BQ3MJ40 725 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 GPATCH4Q5T3I0 446 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 PSRC1Q6PGN9 363 aaPredicted RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 FRAT1Q92837 279 aaPredicted RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 CFAP36Q96G28 342 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 SENP6Q9GZR1 1112 aaPredicted RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 PDCL3Q9H2J4 239 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 MLXIPQ9HAP2 919 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 PCDHB12Q9Y5F1 795 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 MON2Q7Z3U7 1717 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 GOLGA6L6A8MZA4 724 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 FOXD2O60548 495 aaPredicted RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 CD2BP2O95400 341 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 COPB1P53618 953 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 MRPS9P82933 396 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 CFAP70Q5T0N1 1121 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 C7orf31Q8N865 590 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 CSGALNACT1Q8TDX6 532 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 SOCS4Q8WXH5 440 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 BRIP1Q9BX63 1249 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 IPPQ9Y573 584 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 SPATA31A5Q5VU36 1347 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 SPATA31A7Q8IWB4 1347 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 CPLX1O14810 134 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 HMOX1P09601 288 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 CYP2B6P20813 491 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 GRK4P32298 578 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 DOK7Q18PE1 504 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 TRIM44Q96DX7 344 aaPredicted RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 HYPKQ9NX55 129 aa4.12□□□□□ -1.75
TOP2A-201ENST00000423485 FNDC3AQ9Y2H6 1198 aaKnown RBP4.12□□□□□ -1.75
TOP2A-201ENST00000423485 PALLDQ8WX93 1383 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 COL18A1P39060 1754 aa4.11□□□□□ -1.75
TOP2A-201ENST00000423485 BACH1O14867 736 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms