RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TMEM88BA6NKF7 163 aa11.19□□□□□ -0.62
PDGFC-202ENST00000422544 WDHD1O75717 1129 aaPredicted RBP11.19□□□□□ -0.62
PDGFC-202ENST00000422544 ZFYP08048 801 aaPredicted RBP11.19□□□□□ -0.62
PDGFC-202ENST00000422544 DSG3P32926 999 aa11.19□□□□□ -0.62
PDGFC-202ENST00000422544 LRRFIP1Q32MZ4 808 aaKnown RBP11.19□□□□□ -0.62
PDGFC-202ENST00000422544 ZFPM1Q8IX07 1006 aa11.19□□□□□ -0.62
PDGFC-202ENST00000422544 TEX11Q8IYF3 940 aa11.19□□□□□ -0.62
PDGFC-202ENST00000422544 TMEM39BQ9GZU3 492 aa11.19□□□□□ -0.62
PDGFC-202ENST00000422544 ZNF408Q9H9D4 720 aa11.19□□□□□ -0.62
PDGFC-202ENST00000422544 FAM198AQ9UFP1 575 aa11.19□□□□□ -0.62
PDGFC-202ENST00000422544 PLCG2P16885 1265 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 SDSP20132 328 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 TNNI2P48788 182 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 PICALMQ13492 652 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 TNFAIP1Q13829 316 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 FKBP1CQ5VVH2 108 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 LCORLQ8N3X6 602 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 TGFBRAP1Q8WUH2 860 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 OSBP2Q969R2 916 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 CDCA5Q96FF9 252 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 RIOK1Q9BRS2 568 aaKnown RBP11.18□□□□□ -0.62
PDGFC-202ENST00000422544 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 PUS7LQ9H0K6 701 aaKnown RBP11.18□□□□□ -0.62
PDGFC-202ENST00000422544 ARMT1Q9H993 441 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 DDX4Q9NQI0 724 aaKnown RBP11.18□□□□□ -0.62
PDGFC-202ENST00000422544 BRCA2P51587 3418 aa11.18□□□□□ -0.62
PDGFC-202ENST00000422544 WDR33Q9C0J8 1336 aaKnown RBP11.17□□□□□ -0.62
PDGFC-202ENST00000422544 MBD4O95243 580 aa11.17□□□□□ -0.62
PDGFC-202ENST00000422544 CELF2O95319 508 aaKnown RBP11.17□□□□□ -0.62
PDGFC-202ENST00000422544 NBPF12Q5TAG4 269 aaPredicted RBP11.17□□□□□ -0.62
PDGFC-202ENST00000422544 CST9Q5W186 159 aa11.17□□□□□ -0.62
PDGFC-202ENST00000422544 FAM83AQ86UY5 434 aa11.17□□□□□ -0.62
PDGFC-202ENST00000422544 MAPKAPK5Q8IW41 473 aa11.17□□□□□ -0.62
PDGFC-202ENST00000422544 FAM151AQ8WW52 585 aa11.17□□□□□ -0.62
PDGFC-202ENST00000422544 APPBP2Q92624 585 aa11.17□□□□□ -0.62
PDGFC-202ENST00000422544 AIDAQ96BJ3 306 aa11.17□□□□□ -0.62
PDGFC-202ENST00000422544 SEC62Q99442 399 aaKnown RBP11.17□□□□□ -0.62
PDGFC-202ENST00000422544 PCDH10Q9P2E7 1040 aa11.17□□□□□ -0.62
PDGFC-202ENST00000422544 PPP2R3BQ9Y5P8 575 aa11.17□□□□□ -0.62
PDGFC-202ENST00000422544 GTF3C3Q9Y5Q9 886 aa11.17□□□□□ -0.62
PDGFC-202ENST00000422544 M0R2C6 588 aa11.16□□□□□ -0.62
PDGFC-202ENST00000422544 PRKAB2O43741 272 aa11.16□□□□□ -0.62
PDGFC-202ENST00000422544 ENTPD3O75355 529 aa11.16□□□□□ -0.62
PDGFC-202ENST00000422544 USP5P45974 858 aa11.16□□□□□ -0.62
PDGFC-202ENST00000422544 ZMYM1Q5SVZ6 1142 aa11.16□□□□□ -0.62
PDGFC-202ENST00000422544 SH3BP5LQ7L8J4 393 aa11.16□□□□□ -0.62
PDGFC-202ENST00000422544 CERS3Q8IU89 383 aa11.16□□□□□ -0.62
PDGFC-202ENST00000422544 FAM227BQ96M60 508 aa11.16□□□□□ -0.62
PDGFC-202ENST00000422544 TEPSINQ96N21 525 aa11.16□□□□□ -0.62
PDGFC-202ENST00000422544 STRBPQ96SI9 672 aaKnown RBP11.16□□□□□ -0.62
PDGFC-202ENST00000422544 MYH2Q9UKX2 1941 aa11.15□□□□□ -0.62
PDGFC-202ENST00000422544 MYO5AQ9Y4I1 1855 aaKnown RBP11.15□□□□□ -0.62
PDGFC-202ENST00000422544 DDTLA6NHG4 134 aaPredicted RBP11.15□□□□□ -0.62
PDGFC-202ENST00000422544 GPAA1O43292 621 aa11.15□□□□□ -0.62
PDGFC-202ENST00000422544 NMIQ13287 307 aaPredicted RBP11.15□□□□□ -0.62
PDGFC-202ENST00000422544 PRKG1Q13976 671 aa11.15□□□□□ -0.62
PDGFC-202ENST00000422544 DEFB115Q30KQ5 88 aa11.15□□□□□ -0.62
PDGFC-202ENST00000422544 SUPT20HL1Q3ZLR7 823 aa11.15□□□□□ -0.62
PDGFC-202ENST00000422544 CCDC129Q6ZRS4 1044 aa11.15□□□□□ -0.62
PDGFC-202ENST00000422544 TICAM2Q86XR7 235 aa11.15□□□□□ -0.62
PDGFC-202ENST00000422544 ZSCAN29Q8IWY8 852 aaPredicted RBP11.15□□□□□ -0.62
PDGFC-202ENST00000422544 SDR42E1Q8WUS8 393 aa11.15□□□□□ -0.62
PDGFC-202ENST00000422544 CRNKL1Q9BZJ0 848 aaKnown RBP11.15□□□□□ -0.62
PDGFC-202ENST00000422544 OSBPL5Q9H0X9 879 aaPredicted RBP11.15□□□□□ -0.62
PDGFC-202ENST00000422544 SAP30BPQ9UHR5 308 aaKnown RBP11.15□□□□□ -0.62
PDGFC-202ENST00000422544 TSKSQ9UJT2 592 aa11.15□□□□□ -0.62
PDGFC-202ENST00000422544 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
PDGFC-202ENST00000422544 RFX7Q2KHR2 1363 aa11.15□□□□□ -0.63
PDGFC-202ENST00000422544 FLT1P17948 1338 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 SZT2Q5T011 3432 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 A0A0D9SFI3 127 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 NF2P35240 595 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 MLLT1Q03111 559 aaPredicted RBP11.14□□□□□ -0.63
PDGFC-202ENST00000422544 MCMDC2Q4G0Z9 681 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 BMP2KLQ5H9B9 411 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 CWC27Q6UX04 472 aaKnown RBP11.14□□□□□ -0.63
PDGFC-202ENST00000422544 MOB2Q70IA6 237 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 MIGA2Q7L4E1 593 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 HELLSQ9NRZ9 838 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 DIAPH3Q9NSV4 1193 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 FZD1Q9UP38 647 aa11.14□□□□□ -0.63
PDGFC-202ENST00000422544 HIP1O00291 1037 aa11.13□□□□□ -0.63
PDGFC-202ENST00000422544 AOC2O75106 756 aa11.13□□□□□ -0.63
PDGFC-202ENST00000422544 SLURP2P0DP57 97 aa11.13□□□□□ -0.63
PDGFC-202ENST00000422544 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
PDGFC-202ENST00000422544 SLC4A8Q2Y0W8 1093 aa11.13□□□□□ -0.63
PDGFC-202ENST00000422544 C2orf69Q8N8R5 385 aa11.13□□□□□ -0.63
PDGFC-202ENST00000422544 CSRNP1Q96S65 589 aa11.13□□□□□ -0.63
PDGFC-202ENST00000422544 GBA2Q9HCG7 927 aaPredicted RBP11.13□□□□□ -0.63
PDGFC-202ENST00000422544 DCP1AQ9NPI6 582 aaPredicted RBP11.13□□□□□ -0.63
PDGFC-202ENST00000422544 DOCK2Q92608 1830 aa11.12□□□□□ -0.63
PDGFC-202ENST00000422544 CCDC85CA6NKD9 419 aa11.12□□□□□ -0.63
PDGFC-202ENST00000422544 GSG1L2A8MUP6 293 aa11.12□□□□□ -0.63
PDGFC-202ENST00000422544 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
PDGFC-202ENST00000422544 UBE2Q2LH0YL09 131 aa11.12□□□□□ -0.63
PDGFC-202ENST00000422544 PPP1R12BO60237 982 aaPredicted RBP11.12□□□□□ -0.63
PDGFC-202ENST00000422544 USP2O75604 605 aaPredicted RBP11.12□□□□□ -0.63
PDGFC-202ENST00000422544 APPP05067 770 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms