RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 NBPF7P0C2Y1 421 aaPredicted RBP9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 RFC5P40937 340 aa9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 CCT4P50991 539 aaKnown RBP9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 ARMC2Q8NEN0 867 aa9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 ARHGAP45Q92619 1136 aa9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 PCMTD1Q96MG8 357 aaPredicted RBP9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 DBNDD1Q9H9R9 158 aa9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 DACH1Q9UI36 760 aa9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 HDAC5Q9UQL6 1122 aa9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 TAF1P21675 1872 aa9.5□□□□□ -0.89
AC012560.1-202ENST00000421324 WDR90Q96KV7 1748 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 ECE2O60344 883 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 KCNJ4P48050 445 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 EPHA10Q5JZY3 1008 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 LDHAL6AQ6ZMR3 332 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 SH3RF1Q7Z6J0 888 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 LDHDQ86WU2 507 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 GPR101Q96P66 508 aaPredicted RBP9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 USP44Q9H0E7 712 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 LEMD3Q9Y2U8 911 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 UTYO14607 1347 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 KIF16BQ96L93 1317 aa9.49□□□□□ -0.89
AC012560.1-202ENST00000421324 YDJCA8MPS7 323 aa9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 H7C1D1 291 aa9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 AP1G2O75843 785 aa9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 EPS15P42566 896 aa9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 GMPSP49915 693 aaPredicted RBP9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 USP50Q70EL3 339 aaPredicted RBP9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 FRAT1Q92837 279 aaPredicted RBP9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 SUCLG2Q96I99 432 aa9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 CNNM1Q9NRU3 951 aa9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 GPRC5DQ9NZD1 345 aa9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 ZBED9Q6R2W3 1325 aa9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 COL4A5P29400 1685 aa9.48□□□□□ -0.89
AC012560.1-202ENST00000421324 PSMD14O00487 310 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 AXIN1O15169 862 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 PLIN1O60240 522 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 BCAR3O75815 825 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 UBTFL1P0CB47 393 aaPredicted RBP9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 SCNN1DP51172 638 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 CHRNDQ07001 517 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 ZNF787Q6DD87 383 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 SH3BP5LQ7L8J4 393 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 PODNQ7Z5L7 613 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 DPF2Q92785 391 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 ZNF594Q96JF6 807 aaPredicted RBP9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 BICC1Q9H694 974 aaKnown RBP9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 ADARB2Q9NS39 739 aaKnown RBP9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 CNOT7Q9UIV1 285 aaKnown RBP9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 TLL2Q9Y6L7 1015 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 ZNF804BA4D1E1 1349 aa9.47□□□□□ -0.89
AC012560.1-202ENST00000421324 WTIPA6NIX2 430 aaPredicted RBP9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 RPS12P25398 132 aaKnown RBP9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 NR6A1Q15406 480 aa9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 BPHLQ86WA6 291 aaPredicted RBP9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 CNTROBQ8N137 903 aa9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 FAM174AQ8TBP5 190 aa9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 KAZALD1Q96I82 304 aa9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 CDK15Q96Q40 435 aa9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 C1QTNF2Q9BXJ5 285 aa9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 COA1Q9GZY4 146 aa9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 KCNQ5Q9NR82 932 aa9.46□□□□□ -0.9
AC012560.1-202ENST00000421324 COL4A1P02462 1669 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 LRRC37AA6NMS7 1700 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 SCN4AP35499 1836 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 TAF5LO75529 589 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 VIL1P09327 827 aaKnown RBP9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 USP17L8P0C7I0 530 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 RABL6Q3YEC7 729 aaPredicted RBP9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 ZKSCAN2Q63HK3 967 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 ATF7IPQ6VMQ6 1270 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 GPKOWQ92917 476 aaPredicted RBP eCLIP9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 MED23Q9ULK4 1368 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 DUOX1Q9NRD9 1551 aa9.45□□□□□ -0.9
AC012560.1-202ENST00000421324 MYH3P11055 1940 aa9.44□□□□□ -0.9
AC012560.1-202ENST00000421324 GNAI3P08754 354 aa9.44□□□□□ -0.9
AC012560.1-202ENST00000421324 MAP1SQ66K74 1059 aaPredicted RBP9.44□□□□□ -0.9
AC012560.1-202ENST00000421324 ANKRD44Q8N8A2 993 aa9.44□□□□□ -0.9
AC012560.1-202ENST00000421324 AGBL3Q8NEM8 1001 aa9.44□□□□□ -0.9
AC012560.1-202ENST00000421324 EPS8L1Q8TE68 723 aa9.44□□□□□ -0.9
AC012560.1-202ENST00000421324 HMX1Q9NP08 348 aaPredicted RBP9.44□□□□□ -0.9
AC012560.1-202ENST00000421324 FKBPLQ9UIM3 349 aa9.44□□□□□ -0.9
AC012560.1-202ENST00000421324 MROH5Q6ZUA9 1318 aa9.44□□□□□ -0.9
AC012560.1-202ENST00000421324 TRIM27P14373 513 aa9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 TMEM259Q4ZIN3 620 aa9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 METTL24Q5JXM2 366 aa9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 STRIP1Q5VSL9 837 aa9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 TTLL5Q6EMB2 1281 aa9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 PDXDC2PQ6P474 469 aa9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 C15orf52Q6ZUT6 534 aaKnown RBP9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 ZNF804AQ7Z570 1209 aa9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 TXNRD3Q86VQ6 643 aa9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 CLUAP1Q96AJ1 413 aa9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 PUS3Q9BZE2 481 aaKnown RBP9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 RIPOR2Q9Y4F9 1068 aa9.43□□□□□ -0.9
AC012560.1-202ENST00000421324 WASF2Q9Y6W5 498 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms