RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 AKNAD1Q5T1N1 836 aa11.54□□□□□ -0.56
TRIM39-206ENST00000420746 SCYL3Q8IZE3 742 aa11.54□□□□□ -0.56
TRIM39-206ENST00000420746 SUGT1Q9Y2Z0 365 aa11.54□□□□□ -0.56
TRIM39-206ENST00000420746 LAS1LQ9Y4W2 734 aaKnown RBP11.54□□□□□ -0.56
TRIM39-206ENST00000420746 ZHX2Q9Y6X8 837 aa11.54□□□□□ -0.56
TRIM39-206ENST00000420746 PTPRAP18433 802 aa11.53□□□□□ -0.56
TRIM39-206ENST00000420746 HIBADHP31937 336 aaKnown RBP11.53□□□□□ -0.56
TRIM39-206ENST00000420746 CASP7P55210 303 aa11.53□□□□□ -0.56
TRIM39-206ENST00000420746 UBE4AQ14139 1066 aa11.53□□□□□ -0.56
TRIM39-206ENST00000420746 GRIN2CQ14957 1233 aa11.53□□□□□ -0.56
TRIM39-206ENST00000420746 GADL1Q6ZQY3 521 aa11.53□□□□□ -0.56
TRIM39-206ENST00000420746 IL27Q8NEV9 243 aa11.53□□□□□ -0.56
TRIM39-206ENST00000420746 SOCS4Q8WXH5 440 aa11.53□□□□□ -0.56
TRIM39-206ENST00000420746 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
TRIM39-206ENST00000420746 PI4KAP2A4QPH2 592 aa11.52□□□□□ -0.57
TRIM39-206ENST00000420746 IFIT5Q13325 482 aaKnown RBP11.52□□□□□ -0.57
TRIM39-206ENST00000420746 CWF19L2Q2TBE0 894 aaKnown RBP11.52□□□□□ -0.57
TRIM39-206ENST00000420746 HHIPL2Q6UWX4 724 aa11.52□□□□□ -0.57
TRIM39-206ENST00000420746 PI4KAP1Q8N8J0 262 aa11.52□□□□□ -0.57
TRIM39-206ENST00000420746 LRFN3Q9BTN0 628 aa11.52□□□□□ -0.57
TRIM39-206ENST00000420746 PICK1Q9NRD5 415 aa11.52□□□□□ -0.57
TRIM39-206ENST00000420746 DOCK3Q8IZD9 2030 aa11.52□□□□□ -0.57
TRIM39-206ENST00000420746 PHF20L1A8MW92 1017 aa11.51□□□□□ -0.57
TRIM39-206ENST00000420746 CACNB2Q08289 660 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-206ENST00000420746 GCKRQ14397 625 aa11.51□□□□□ -0.57
TRIM39-206ENST00000420746 GRIK5Q16478 980 aa11.51□□□□□ -0.57
TRIM39-206ENST00000420746 PROCA1Q8NCQ7 364 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-206ENST00000420746 FAM84BQ96KN1 310 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-206ENST00000420746 SENP6Q9GZR1 1112 aaPredicted RBP11.51□□□□□ -0.57
TRIM39-206ENST00000420746 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
TRIM39-206ENST00000420746 ATRNL1Q5VV63 1379 aa11.51□□□□□ -0.57
TRIM39-206ENST00000420746 ZKSCAN1P17029 563 aaPredicted RBP11.5□□□□□ -0.57
TRIM39-206ENST00000420746 GYG1P46976 350 aa11.5□□□□□ -0.57
TRIM39-206ENST00000420746 RTP1P59025 263 aa11.5□□□□□ -0.57
TRIM39-206ENST00000420746 CCDC30Q5VVM6 783 aa11.5□□□□□ -0.57
TRIM39-206ENST00000420746 GAS2L1Q99501 681 aaPredicted RBP11.5□□□□□ -0.57
TRIM39-206ENST00000420746 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
TRIM39-206ENST00000420746 MBIPQ9NS73 344 aa11.5□□□□□ -0.57
TRIM39-206ENST00000420746 MORF4L1Q9UBU8 362 aa11.5□□□□□ -0.57
TRIM39-206ENST00000420746 DNM1LO00429 736 aa11.49□□□□□ -0.57
TRIM39-206ENST00000420746 MSCO60682 206 aa11.49□□□□□ -0.57
TRIM39-206ENST00000420746 CYP2B6P20813 491 aa11.49□□□□□ -0.57
TRIM39-206ENST00000420746 DNAJB2P25686 324 aa11.49□□□□□ -0.57
TRIM39-206ENST00000420746 PABPC4Q13310 644 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRIM39-206ENST00000420746 TMEM31Q5JXX7 168 aa11.49□□□□□ -0.57
TRIM39-206ENST00000420746 ALYREFQ86V81 257 aaKnown RBP11.49□□□□□ -0.57
TRIM39-206ENST00000420746 BADQ92934 168 aa11.49□□□□□ -0.57
TRIM39-206ENST00000420746 ZNF576Q9H609 170 aa11.49□□□□□ -0.57
TRIM39-206ENST00000420746 MYH16Q9H6N6 1097 aa11.49□□□□□ -0.57
TRIM39-206ENST00000420746 PTPRFP10586 1907 aa11.48□□□□□ -0.57
TRIM39-206ENST00000420746 ZNF853P0CG23 659 aa11.48□□□□□ -0.57
TRIM39-206ENST00000420746 MAP3K10Q02779 954 aa11.48□□□□□ -0.57
TRIM39-206ENST00000420746 SNX17Q15036 470 aa11.48□□□□□ -0.57
TRIM39-206ENST00000420746 LDHAL6AQ6ZMR3 332 aa11.48□□□□□ -0.57
TRIM39-206ENST00000420746 FBXO33Q7Z6M2 555 aa11.48□□□□□ -0.57
TRIM39-206ENST00000420746 RNPC3Q96LT9 517 aaKnown RBP11.48□□□□□ -0.57
TRIM39-206ENST00000420746 P2RX7Q99572 595 aaKnown RBP11.48□□□□□ -0.57
TRIM39-206ENST00000420746 PLXNB2O15031 1838 aa11.48□□□□□ -0.57
TRIM39-206ENST00000420746 XIRP2A4UGR9 3374 aa11.48□□□□□ -0.57
TRIM39-206ENST00000420746 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-206ENST00000420746 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-206ENST00000420746 TRIM75PA6NK02 468 aa11.47□□□□□ -0.57
TRIM39-206ENST00000420746 CTNND1O60716 968 aaKnown RBP11.47□□□□□ -0.57
TRIM39-206ENST00000420746 GPR37L1O60883 481 aa11.47□□□□□ -0.57
TRIM39-206ENST00000420746 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
TRIM39-206ENST00000420746 CCND3P30281 292 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-206ENST00000420746 ATN1P54259 1190 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-206ENST00000420746 PDE3AQ14432 1141 aa11.47□□□□□ -0.57
TRIM39-206ENST00000420746 NEUROD2Q15784 382 aa11.47□□□□□ -0.57
TRIM39-206ENST00000420746 TREML2Q5T2D2 321 aa11.47□□□□□ -0.57
TRIM39-206ENST00000420746 POTEEQ6S8J3 1075 aa11.47□□□□□ -0.57
TRIM39-206ENST00000420746 VPS37DQ86XT2 251 aa11.47□□□□□ -0.57
TRIM39-206ENST00000420746 LPAR1Q92633 364 aa11.47□□□□□ -0.57
TRIM39-206ENST00000420746 USP6NLQ92738 828 aa11.47□□□□□ -0.57
TRIM39-206ENST00000420746 CXXC1Q9P0U4 656 aaPredicted RBP11.47□□□□□ -0.57
TRIM39-206ENST00000420746 MUC6Q6W4X9 2439 aa11.47□□□□□ -0.57
TRIM39-206ENST00000420746 PLIN1O60240 522 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 BMP1P13497 986 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 FOXO4P98177 505 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 TCP10Q12799 353 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 NFIAQ12857 509 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 CHAF1AQ13111 956 aaPredicted RBP11.46□□□□□ -0.57
TRIM39-206ENST00000420746 AAK1Q2M2I8 961 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 C1orf53Q5VUE5 145 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 TIFAQ96CG3 184 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 APBA2Q99767 749 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 TBC1D2Q9BYX2 928 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 TSPYL2Q9H2G4 693 aaPredicted RBP11.46□□□□□ -0.57
TRIM39-206ENST00000420746 PDLIM7Q9NR12 457 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 CNNM1Q9NRU3 951 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 FAM198AQ9UFP1 575 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 ATP11BQ9Y2G3 1177 aa11.46□□□□□ -0.57
TRIM39-206ENST00000420746 CHD9Q3L8U1 2897 aa11.45□□□□□ -0.58
TRIM39-206ENST00000420746 MAPK4P31152 587 aa11.45□□□□□ -0.58
TRIM39-206ENST00000420746 RGS2P41220 211 aa11.45□□□□□ -0.58
TRIM39-206ENST00000420746 CCDC57Q2TAC2 916 aa11.45□□□□□ -0.58
TRIM39-206ENST00000420746 CAVIN4Q5BKX8 364 aa11.45□□□□□ -0.58
TRIM39-206ENST00000420746 TAF7LQ5H9L4 462 aa11.45□□□□□ -0.58
TRIM39-206ENST00000420746 CDC42EP5Q6NZY7 148 aa11.45□□□□□ -0.58
TRIM39-206ENST00000420746 ASCC2Q9H1I8 757 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms