RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 B4GALNT3Q6L9W6 998 aa17.46■□□□□ 0.39
PTPN18-204ENST00000420717 RGMBQ6NW40 437 aa17.46■□□□□ 0.39
PTPN18-204ENST00000420717 ARMC9Q7Z3E5 817 aa17.46■□□□□ 0.39
PTPN18-204ENST00000420717 OSBPL5Q9H0X9 879 aaPredicted RBP17.46■□□□□ 0.39
PTPN18-204ENST00000420717 BCL11AQ9H165 835 aa17.46■□□□□ 0.39
PTPN18-204ENST00000420717 MYH1P12882 1939 aa17.46■□□□□ 0.39
PTPN18-204ENST00000420717 AK9Q5TCS8 1911 aa17.46■□□□□ 0.39
PTPN18-204ENST00000420717 ECE1P42892 770 aa17.45■□□□□ 0.38
PTPN18-204ENST00000420717 ERICH6BQ5W0A0 696 aa17.45■□□□□ 0.38
PTPN18-204ENST00000420717 DCAF15Q66K64 600 aa17.45■□□□□ 0.38
PTPN18-204ENST00000420717 SH3BP5LQ7L8J4 393 aa17.45■□□□□ 0.38
PTPN18-204ENST00000420717 ZFPM1Q8IX07 1006 aa17.45■□□□□ 0.38
PTPN18-204ENST00000420717 MKRN1Q9UHC7 482 aaKnown RBP17.45■□□□□ 0.38
PTPN18-204ENST00000420717 FAM155AB1AL88 458 aaPredicted RBP17.44■□□□□ 0.38
PTPN18-204ENST00000420717 USP2O75604 605 aaPredicted RBP17.44■□□□□ 0.38
PTPN18-204ENST00000420717 SLC10A3P09131 477 aa17.44■□□□□ 0.38
PTPN18-204ENST00000420717 IREB2P48200 963 aaKnown RBP17.44■□□□□ 0.38
PTPN18-204ENST00000420717 VEGFBP49765 207 aa17.44■□□□□ 0.38
PTPN18-204ENST00000420717 DYNLL1P63167 89 aaKnown RBP17.44■□□□□ 0.38
PTPN18-204ENST00000420717 TCP10Q12799 353 aa17.44■□□□□ 0.38
PTPN18-204ENST00000420717 LRRFIP1Q32MZ4 808 aaKnown RBP17.44■□□□□ 0.38
PTPN18-204ENST00000420717 CENPQQ7L2Z9 268 aaPredicted RBP17.44■□□□□ 0.38
PTPN18-204ENST00000420717 MIGA1Q8NAN2 632 aa17.44■□□□□ 0.38
PTPN18-204ENST00000420717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.44■□□□□ 0.38
PTPN18-204ENST00000420717 CAPNS2Q96L46 248 aa17.44■□□□□ 0.38
PTPN18-204ENST00000420717 ZNF112Q9UJU3 913 aa17.44■□□□□ 0.38
PTPN18-204ENST00000420717 WDR33Q9C0J8 1336 aaKnown RBP17.44■□□□□ 0.38
PTPN18-204ENST00000420717 DOCK1Q14185 1865 aa17.44■□□□□ 0.38
PTPN18-204ENST00000420717 MAGEB6P1A0A0J9YX57 407 aa17.43■□□□□ 0.38
PTPN18-204ENST00000420717 DDTLA6NHG4 134 aaPredicted RBP17.43■□□□□ 0.38
PTPN18-204ENST00000420717 TBC1D12O60347 775 aa17.43■□□□□ 0.38
PTPN18-204ENST00000420717 NEFLP07196 543 aa17.43■□□□□ 0.38
PTPN18-204ENST00000420717 PDE4AP27815 886 aa17.43■□□□□ 0.38
PTPN18-204ENST00000420717 MOB2Q70IA6 237 aa17.43■□□□□ 0.38
PTPN18-204ENST00000420717 METTL16Q86W50 562 aaKnown RBP17.43■□□□□ 0.38
PTPN18-204ENST00000420717 RASAL3Q86YV0 1011 aa17.43■□□□□ 0.38
PTPN18-204ENST00000420717 APPBP2Q92624 585 aa17.43■□□□□ 0.38
PTPN18-204ENST00000420717 CCDC102AQ96A19 550 aa17.43■□□□□ 0.38
PTPN18-204ENST00000420717 EVI5LQ96CN4 794 aa17.43■□□□□ 0.38
PTPN18-204ENST00000420717 CSRNP1Q96S65 589 aa17.43■□□□□ 0.38
PTPN18-204ENST00000420717 DHX36Q9H2U1 1008 aaKnown RBP17.43■□□□□ 0.38
PTPN18-204ENST00000420717 ANGEL1Q9UNK9 670 aaKnown RBP17.43■□□□□ 0.38
PTPN18-204ENST00000420717 RNF113AO15541 343 aaKnown RBP17.42■□□□□ 0.38
PTPN18-204ENST00000420717 MAP2K2P36507 400 aa17.42■□□□□ 0.38
PTPN18-204ENST00000420717 PICALMQ13492 652 aa17.42■□□□□ 0.38
PTPN18-204ENST00000420717 CYP4F22Q6NT55 531 aa17.42■□□□□ 0.38
PTPN18-204ENST00000420717 ANKRD13AQ8IZ07 590 aa17.42■□□□□ 0.38
PTPN18-204ENST00000420717 ZNF341Q9BYN7 854 aa17.42■□□□□ 0.38
PTPN18-204ENST00000420717 TAOK2Q9UL54 1235 aa17.42■□□□□ 0.38
PTPN18-204ENST00000420717 UBE2Q2LH0YL09 131 aa17.41■□□□□ 0.38
PTPN18-204ENST00000420717 NOGQ13253 232 aa17.41■□□□□ 0.38
PTPN18-204ENST00000420717 TTLL12Q14166 644 aaPredicted RBP17.41■□□□□ 0.38
PTPN18-204ENST00000420717 NOL9Q5SY16 702 aaKnown RBP17.41■□□□□ 0.38
PTPN18-204ENST00000420717 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.41■□□□□ 0.38
PTPN18-204ENST00000420717 LCORLQ8N3X6 602 aa17.41■□□□□ 0.38
PTPN18-204ENST00000420717 TGFBRAP1Q8WUH2 860 aa17.41■□□□□ 0.38
PTPN18-204ENST00000420717 CRNKL1Q9BZJ0 848 aaKnown RBP17.41■□□□□ 0.38
PTPN18-204ENST00000420717 ATAD5Q96QE3 1844 aa17.4■□□□□ 0.38
PTPN18-204ENST00000420717 PCNTO95613 3336 aa17.4■□□□□ 0.38
PTPN18-204ENST00000420717 MBD4O95243 580 aa17.4■□□□□ 0.38
PTPN18-204ENST00000420717 CHGBP05060 677 aa17.4■□□□□ 0.38
PTPN18-204ENST00000420717 FSD1Q9BTV5 496 aa17.4■□□□□ 0.38
PTPN18-204ENST00000420717 PUS7LQ9H0K6 701 aaKnown RBP17.4■□□□□ 0.38
PTPN18-204ENST00000420717 EHD4Q9H223 541 aa17.4■□□□□ 0.38
PTPN18-204ENST00000420717 HERC5Q9UII4 1024 aaKnown RBP17.4■□□□□ 0.38
PTPN18-204ENST00000420717 FZD1Q9UP38 647 aa17.4■□□□□ 0.38
PTPN18-204ENST00000420717 PHF20L1A8MW92 1017 aa17.39■□□□□ 0.37
PTPN18-204ENST00000420717 ZBTB48P10074 688 aaPredicted RBP17.39■□□□□ 0.37
PTPN18-204ENST00000420717 ZNF157P51786 506 aaPredicted RBP17.39■□□□□ 0.37
PTPN18-204ENST00000420717 MAP3K9P80192 1104 aa17.39■□□□□ 0.37
PTPN18-204ENST00000420717 SLFNL1Q499Z3 407 aa17.39■□□□□ 0.37
PTPN18-204ENST00000420717 ZMYM1Q5SVZ6 1142 aa17.39■□□□□ 0.37
PTPN18-204ENST00000420717 MAPKAPK5Q8IW41 473 aa17.39■□□□□ 0.37
PTPN18-204ENST00000420717 ATP8A2Q9NTI2 1148 aa17.39■□□□□ 0.37
PTPN18-204ENST00000420717 PI4KBQ9UBF8 816 aa17.39■□□□□ 0.37
PTPN18-204ENST00000420717 PHIPQ8WWQ0 1821 aa17.39■□□□□ 0.37
PTPN18-204ENST00000420717 PRKG1Q13976 671 aa17.38■□□□□ 0.37
PTPN18-204ENST00000420717 VGLL4Q14135 290 aa17.38■□□□□ 0.37
PTPN18-204ENST00000420717 REM2Q8IYK8 340 aaPredicted RBP17.38■□□□□ 0.37
PTPN18-204ENST00000420717 OSBP2Q969R2 916 aa17.38■□□□□ 0.37
PTPN18-204ENST00000420717 CLMNQ96JQ2 1002 aa17.38■□□□□ 0.37
PTPN18-204ENST00000420717 WRNIP1Q96S55 665 aa17.38■□□□□ 0.37
PTPN18-204ENST00000420717 ARMT1Q9H993 441 aa17.38■□□□□ 0.37
PTPN18-204ENST00000420717 DCP1AQ9NPI6 582 aaPredicted RBP17.38■□□□□ 0.37
PTPN18-204ENST00000420717 SNCAIPQ9Y6H5 919 aa17.38■□□□□ 0.37
PTPN18-204ENST00000420717 BAZ2AQ9UIF9 1905 aaKnown RBP17.38■□□□□ 0.37
PTPN18-204ENST00000420717 SPDYE5A6NIY4 337 aa17.37■□□□□ 0.37
PTPN18-204ENST00000420717 USP5P45974 858 aa17.37■□□□□ 0.37
PTPN18-204ENST00000420717 SPRYD7Q5W111 196 aa17.37■□□□□ 0.37
PTPN18-204ENST00000420717 GIMAP6Q6P9H5 292 aa17.37■□□□□ 0.37
PTPN18-204ENST00000420717 ZSCAN29Q8IWY8 852 aaPredicted RBP17.37■□□□□ 0.37
PTPN18-204ENST00000420717 AIDAQ96BJ3 306 aa17.37■□□□□ 0.37
PTPN18-204ENST00000420717 STRBPQ96SI9 672 aaKnown RBP17.37■□□□□ 0.37
PTPN18-204ENST00000420717 GNAT2P19087 354 aa17.36■□□□□ 0.37
PTPN18-204ENST00000420717 TTC22Q5TAA0 569 aa17.36■□□□□ 0.37
PTPN18-204ENST00000420717 MIGA2Q7L4E1 593 aa17.36■□□□□ 0.37
PTPN18-204ENST00000420717 FOXP4Q8IVH2 680 aaPredicted RBP17.36■□□□□ 0.37
PTPN18-204ENST00000420717 WNK4Q96J92 1243 aa17.36■□□□□ 0.37
PTPN18-204ENST00000420717 DNAJC18Q9H819 358 aa17.36■□□□□ 0.37
PTPN18-204ENST00000420717 CSADQ9Y600 493 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms