RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 NOL10Q9BSC4 688 aaKnown RBP26.21■■□□□ 1.79
PTPN4-202ENST00000420482 LRP2BPQ9P2M1 347 aa26.21■■□□□ 1.79
PTPN4-202ENST00000420482 GPR75-ASB3A0A0A6YYF3 556 aa26.2■■□□□ 1.78
PTPN4-202ENST00000420482 TNNI3KQ59H18 835 aa26.2■■□□□ 1.78
PTPN4-202ENST00000420482 NOL9Q5SY16 702 aaKnown RBP26.2■■□□□ 1.78
PTPN4-202ENST00000420482 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.2■■□□□ 1.78
PTPN4-202ENST00000420482 FPGT-TNNI3KV9GXZ4 949 aa26.2■■□□□ 1.78
PTPN4-202ENST00000420482 PICALMQ13492 652 aa26.19■■□□□ 1.78
PTPN4-202ENST00000420482 KIF22Q14807 665 aa26.19■■□□□ 1.78
PTPN4-202ENST00000420482 C1orf115Q9H7X2 142 aa26.19■■□□□ 1.78
PTPN4-202ENST00000420482 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.18■■□□□ 1.78
PTPN4-202ENST00000420482 NSUN4Q96CB9 384 aaKnown RBP26.18■■□□□ 1.78
PTPN4-202ENST00000420482 PICK1Q9NRD5 415 aa26.18■■□□□ 1.78
PTPN4-202ENST00000420482 DOCK2Q92608 1830 aa26.18■■□□□ 1.78
PTPN4-202ENST00000420482 KIAA0100Q14667 2235 aaKnown RBP26.17■■□□□ 1.78
PTPN4-202ENST00000420482 BTBD19C9JJ37 291 aa26.17■■□□□ 1.78
PTPN4-202ENST00000420482 IGSF3O75054 1194 aa26.17■■□□□ 1.78
PTPN4-202ENST00000420482 NPM3O75607 178 aaKnown RBP26.17■■□□□ 1.78
PTPN4-202ENST00000420482 MCAMP43121 646 aa26.17■■□□□ 1.78
PTPN4-202ENST00000420482 PI16Q6UXB8 463 aa26.17■■□□□ 1.78
PTPN4-202ENST00000420482 ZFPM1Q8IX07 1006 aa26.17■■□□□ 1.78
PTPN4-202ENST00000420482 PTPN22Q9Y2R2 807 aa26.17■■□□□ 1.78
PTPN4-202ENST00000420482 NOP58Q9Y2X3 529 aaKnown RBP26.17■■□□□ 1.78
PTPN4-202ENST00000420482 RFX7Q2KHR2 1363 aa26.17■■□□□ 1.78
PTPN4-202ENST00000420482 TLR2O60603 784 aa26.16■■□□□ 1.78
PTPN4-202ENST00000420482 RLBP1P12271 317 aa26.16■■□□□ 1.78
PTPN4-202ENST00000420482 TBC1D9Q6ZT07 1266 aa26.16■■□□□ 1.78
PTPN4-202ENST00000420482 KCNH4Q9UQ05 1017 aa26.16■■□□□ 1.78
PTPN4-202ENST00000420482 BAG3O95817 575 aa26.15■■□□□ 1.78
PTPN4-202ENST00000420482 ANKRD23Q86SG2 305 aa26.15■■□□□ 1.78
PTPN4-202ENST00000420482 SCYL3Q8IZE3 742 aa26.15■■□□□ 1.78
PTPN4-202ENST00000420482 CXCL11O14625 94 aa26.14■■□□□ 1.78
PTPN4-202ENST00000420482 PLCG2P16885 1265 aa26.14■■□□□ 1.78
PTPN4-202ENST00000420482 ERC1Q8IUD2 1116 aa26.14■■□□□ 1.78
PTPN4-202ENST00000420482 ZNF512BQ96KM6 892 aaPredicted RBP26.14■■□□□ 1.78
PTPN4-202ENST00000420482 DBNDD2Q9BQY9 259 aa26.14■■□□□ 1.78
PTPN4-202ENST00000420482 ATRNL1Q5VV63 1379 aa26.13■■□□□ 1.77
PTPN4-202ENST00000420482 RHBDL3P58872 404 aa26.13■■□□□ 1.77
PTPN4-202ENST00000420482 MAP3K10Q02779 954 aa26.13■■□□□ 1.77
PTPN4-202ENST00000420482 NAA16Q6N069 864 aaPredicted RBP26.13■■□□□ 1.77
PTPN4-202ENST00000420482 DDX4Q9NQI0 724 aaKnown RBP26.13■■□□□ 1.77
PTPN4-202ENST00000420482 DDTLA6NHG4 134 aaPredicted RBP26.12■■□□□ 1.77
PTPN4-202ENST00000420482 PHF20L1A8MW92 1017 aa26.12■■□□□ 1.77
PTPN4-202ENST00000420482 CTNND1O60716 968 aaKnown RBP26.12■■□□□ 1.77
PTPN4-202ENST00000420482 GNRH1P01148 92 aa26.12■■□□□ 1.77
PTPN4-202ENST00000420482 HSP90AB4PQ58FF6 505 aa26.12■■□□□ 1.77
PTPN4-202ENST00000420482 CEP85Q6P2H3 762 aa26.12■■□□□ 1.77
PTPN4-202ENST00000420482 FASTKD5Q7L8L6 764 aaKnown RBP26.12■■□□□ 1.77
PTPN4-202ENST00000420482 CHMP4BQ9H444 224 aaKnown RBP26.12■■□□□ 1.77
PTPN4-202ENST00000420482 PDHXO00330 501 aa26.11■■□□□ 1.77
PTPN4-202ENST00000420482 TBC1D12O60347 775 aa26.11■■□□□ 1.77
PTPN4-202ENST00000420482 SH3BP5LQ7L8J4 393 aa26.11■■□□□ 1.77
PTPN4-202ENST00000420482 TEX11Q8IYF3 940 aa26.11■■□□□ 1.77
PTPN4-202ENST00000420482 ZNF384Q8TF68 577 aa26.11■■□□□ 1.77
PTPN4-202ENST00000420482 SNRKQ9NRH2 765 aa26.11■■□□□ 1.77
PTPN4-202ENST00000420482 PCDH10Q9P2E7 1040 aa26.11■■□□□ 1.77
PTPN4-202ENST00000420482 ZHX2Q9Y6X8 837 aa26.11■■□□□ 1.77
PTPN4-202ENST00000420482 COL2A1P02458 1487 aaPredicted RBP26.11■■□□□ 1.77
PTPN4-202ENST00000420482 NBPF11Q86T75 865 aa26.1■■□□□ 1.77
PTPN4-202ENST00000420482 PANK1Q8TE04 598 aa26.1■■□□□ 1.77
PTPN4-202ENST00000420482 PARK7Q99497 189 aaKnown RBP26.1■■□□□ 1.77
PTPN4-202ENST00000420482 CENPFP49454 3210 aa26.1■■□□□ 1.77
PTPN4-202ENST00000420482 PTPRAP18433 802 aa26.09■■□□□ 1.77
PTPN4-202ENST00000420482 LACTBP83111 547 aaPredicted RBP26.09■■□□□ 1.77
PTPN4-202ENST00000420482 OSBPL5Q9H0X9 879 aaPredicted RBP26.09■■□□□ 1.77
PTPN4-202ENST00000420482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.09■■□□□ 1.77
PTPN4-202ENST00000420482 MAST2Q6P0Q8 1798 aa26.08■■□□□ 1.77
PTPN4-202ENST00000420482 PRMT2P55345 433 aa26.08■■□□□ 1.77
PTPN4-202ENST00000420482 ARMC5Q96C12 935 aa26.08■■□□□ 1.77
PTPN4-202ENST00000420482 DDX19BQ9UMR2 479 aa26.08■■□□□ 1.77
PTPN4-202ENST00000420482 ZSWIM8A7E2V4 1837 aa26.08■■□□□ 1.77
PTPN4-202ENST00000420482 HMMRO75330 724 aa26.07■■□□□ 1.76
PTPN4-202ENST00000420482 CAP1Q01518 475 aa26.07■■□□□ 1.76
PTPN4-202ENST00000420482 CCDC8Q9H0W5 538 aaPredicted RBP26.07■■□□□ 1.76
PTPN4-202ENST00000420482 DHX36Q9H2U1 1008 aaKnown RBP26.07■■□□□ 1.76
PTPN4-202ENST00000420482 AATFQ9NY61 560 aaKnown RBP eCLIP26.07■■□□□ 1.76
PTPN4-202ENST00000420482 DBNLQ9UJU6 430 aaKnown RBP26.07■■□□□ 1.76
PTPN4-202ENST00000420482 POTEFA5A3E0 1075 aa26.06■■□□□ 1.76
PTPN4-202ENST00000420482 CYP2E1P05181 493 aaPredicted RBP26.06■■□□□ 1.76
PTPN4-202ENST00000420482 SLC9C1Q4G0N8 1177 aa26.06■■□□□ 1.76
PTPN4-202ENST00000420482 C17orf99Q6UX52 265 aa26.06■■□□□ 1.76
PTPN4-202ENST00000420482 CERS3Q8IU89 383 aa26.06■■□□□ 1.76
PTPN4-202ENST00000420482 TBC1D2Q9BYX2 928 aa26.06■■□□□ 1.76
PTPN4-202ENST00000420482 HERC5Q9UII4 1024 aaKnown RBP26.06■■□□□ 1.76
PTPN4-202ENST00000420482 DOCK1Q14185 1865 aa26.05■■□□□ 1.76
PTPN4-202ENST00000420482 A0A0G2JLL6 359 aaPredicted RBP26.05■■□□□ 1.76
PTPN4-202ENST00000420482 HOXD10P28358 340 aa26.05■■□□□ 1.76
PTPN4-202ENST00000420482 ZAP70P43403 619 aa26.05■■□□□ 1.76
PTPN4-202ENST00000420482 TMED8Q6PL24 325 aaPredicted RBP26.05■■□□□ 1.76
PTPN4-202ENST00000420482 PRRT2Q7Z6L0 340 aaPredicted RBP26.05■■□□□ 1.76
PTPN4-202ENST00000420482 RPAP2Q8IXW5 612 aaPredicted RBP26.05■■□□□ 1.76
PTPN4-202ENST00000420482 EAF2Q96CJ1 260 aaPredicted RBP26.05■■□□□ 1.76
PTPN4-202ENST00000420482 EXOC6BQ9Y2D4 811 aa26.05■■□□□ 1.76
PTPN4-202ENST00000420482 AFG3L2Q9Y4W6 797 aa26.05■■□□□ 1.76
PTPN4-202ENST00000420482 PPP4CP60510 307 aa26.04■■□□□ 1.76
PTPN4-202ENST00000420482 GADL1Q6ZQY3 521 aa26.04■■□□□ 1.76
PTPN4-202ENST00000420482 SH3RF3Q8TEJ3 882 aaPredicted RBP26.04■■□□□ 1.76
PTPN4-202ENST00000420482 TMEM106CQ9BVX2 250 aa26.04■■□□□ 1.76
PTPN4-202ENST00000420482 TRIM34Q9BYJ4 488 aa26.04■■□□□ 1.76
PTPN4-202ENST00000420482 PI4KBQ9UBF8 816 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms