RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 CCT2P78371 535 aaKnown RBP24.68■■□□□ 1.54
GPC1-202ENST00000420138 NSUN7Q8NE18 718 aaKnown RBP24.68■■□□□ 1.54
GPC1-202ENST00000420138 TMEM87BQ96K49 555 aa24.68■■□□□ 1.54
GPC1-202ENST00000420138 LLPHQ9BRT6 129 aaKnown RBP24.68■■□□□ 1.54
GPC1-202ENST00000420138 SENP2Q9HC62 589 aa24.68■■□□□ 1.54
GPC1-202ENST00000420138 NCOA5Q9HCD5 579 aaKnown RBP24.68■■□□□ 1.54
GPC1-202ENST00000420138 MTMR6Q9Y217 621 aa24.68■■□□□ 1.54
GPC1-202ENST00000420138 RNF41Q9H4P4 317 aaPredicted RBP24.67■■□□□ 1.54
GPC1-202ENST00000420138 GAKO14976 1311 aa24.67■■□□□ 1.54
GPC1-202ENST00000420138 KLF18A0A0U1RQI7 1052 aa24.66■■□□□ 1.54
GPC1-202ENST00000420138 ZSCAN22P10073 491 aaPredicted RBP24.66■■□□□ 1.54
GPC1-202ENST00000420138 SBK1Q52WX2 424 aa24.66■■□□□ 1.54
GPC1-202ENST00000420138 STK11IPQ8N1F8 1099 aa24.66■■□□□ 1.54
GPC1-202ENST00000420138 PIM2Q9P1W9 311 aa24.66■■□□□ 1.54
GPC1-202ENST00000420138 CD2APQ9Y5K6 639 aa24.66■■□□□ 1.54
GPC1-202ENST00000420138 TRAK2O60296 914 aa24.65■■□□□ 1.54
GPC1-202ENST00000420138 BAG3O95817 575 aa24.65■■□□□ 1.54
GPC1-202ENST00000420138 PTMSP20962 102 aa24.65■■□□□ 1.54
GPC1-202ENST00000420138 LY9Q9HBG7 655 aa24.65■■□□□ 1.54
GPC1-202ENST00000420138 SUGT1Q9Y2Z0 365 aa24.65■■□□□ 1.54
GPC1-202ENST00000420138 BTDP43251 543 aa24.65■■□□□ 1.54
GPC1-202ENST00000420138 PODNQ7Z5L7 613 aa24.65■■□□□ 1.54
GPC1-202ENST00000420138 MXD3Q9BW11 206 aa24.65■■□□□ 1.54
GPC1-202ENST00000420138 KCNQ5Q9NR82 932 aa24.65■■□□□ 1.54
GPC1-202ENST00000420138 GOLGB1Q14789 3259 aaKnown RBP24.64■■□□□ 1.54
GPC1-202ENST00000420138 CYP2D6P10635 497 aa24.64■■□□□ 1.54
GPC1-202ENST00000420138 RRP12Q5JTH9 1297 aaKnown RBP24.64■■□□□ 1.54
GPC1-202ENST00000420138 SGMS1Q86VZ5 419 aa24.64■■□□□ 1.54
GPC1-202ENST00000420138 DBNDD1Q9H9R9 158 aa24.64■■□□□ 1.54
GPC1-202ENST00000420138 ARPP21Q9UBL0 812 aaPredicted RBP24.64■■□□□ 1.54
GPC1-202ENST00000420138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.64■■□□□ 1.54
GPC1-202ENST00000420138 LIFRP42702 1097 aa24.63■■□□□ 1.53
GPC1-202ENST00000420138 RHBDL3P58872 404 aa24.63■■□□□ 1.53
GPC1-202ENST00000420138 LARP1BQ659C4 914 aaKnown RBP24.63■■□□□ 1.53
GPC1-202ENST00000420138 MCTP1Q6DN14 999 aa24.63■■□□□ 1.53
GPC1-202ENST00000420138 SPON1Q9HCB6 807 aa24.63■■□□□ 1.53
GPC1-202ENST00000420138 GOLGA8BA8MQT2 603 aa24.63■■□□□ 1.53
GPC1-202ENST00000420138 GRIPAP1Q4V328 841 aa24.63■■□□□ 1.53
GPC1-202ENST00000420138 CCDC93Q567U6 631 aa24.63■■□□□ 1.53
GPC1-202ENST00000420138 MTA3Q9BTC8 594 aa24.63■■□□□ 1.53
GPC1-202ENST00000420138 NAP1L2Q9ULW6 460 aaPredicted RBP24.63■■□□□ 1.53
GPC1-202ENST00000420138 BAZ2AQ9UIF9 1905 aaKnown RBP24.62■■□□□ 1.53
GPC1-202ENST00000420138 G3V3G9 751 aa24.62■■□□□ 1.53
GPC1-202ENST00000420138 F13A1P00488 732 aa24.62■■□□□ 1.53
GPC1-202ENST00000420138 USP17L8P0C7I0 530 aa24.62■■□□□ 1.53
GPC1-202ENST00000420138 TMEM67Q5HYA8 995 aa24.62■■□□□ 1.53
GPC1-202ENST00000420138 DCAF8Q5TAQ9 597 aa24.62■■□□□ 1.53
GPC1-202ENST00000420138 CERS3Q8IU89 383 aa24.62■■□□□ 1.53
GPC1-202ENST00000420138 PTPDC1A2A3K4 754 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 PCP11498 1178 aaKnown RBP24.61■■□□□ 1.53
GPC1-202ENST00000420138 APOA5Q6Q788 366 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 RAB11FIP4Q86YS3 637 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 TOMM22Q9NS69 142 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 MCM9Q9NXL9 1143 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 DAGLAQ9Y4D2 1042 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 IFIT3O14879 490 aaKnown RBP24.61■■□□□ 1.53
GPC1-202ENST00000420138 PDCP20941 246 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 KIAA2012Q0VF49 1180 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 DALRD3Q5D0E6 543 aaKnown RBP24.61■■□□□ 1.53
GPC1-202ENST00000420138 SLF2Q8IX21 1173 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 RTKN2Q8IZC4 609 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 SUPT20HQ8NEM7 779 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 TGFBRAP1Q8WUH2 860 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 ESR2Q92731 530 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 FBXW7Q969H0 707 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 DDX11Q96FC9 970 aa24.61■■□□□ 1.53
GPC1-202ENST00000420138 NOL10Q9BSC4 688 aaKnown RBP24.61■■□□□ 1.53
GPC1-202ENST00000420138 ECE2O60344 883 aa24.6■■□□□ 1.53
GPC1-202ENST00000420138 PDIA4P13667 645 aaKnown RBP24.6■■□□□ 1.53
GPC1-202ENST00000420138 USP5P45974 858 aa24.6■■□□□ 1.53
GPC1-202ENST00000420138 AOC3Q16853 763 aa24.6■■□□□ 1.53
GPC1-202ENST00000420138 C12orf60Q5U649 245 aa24.6■■□□□ 1.53
GPC1-202ENST00000420138 ZKSCAN3Q9BRR0 538 aa24.6■■□□□ 1.53
GPC1-202ENST00000420138 MYH2Q9UKX2 1941 aa24.6■■□□□ 1.53
GPC1-202ENST00000420138 ORC4O43929 436 aa24.59■■□□□ 1.53
GPC1-202ENST00000420138 PRDM1O75626 825 aa24.59■■□□□ 1.53
GPC1-202ENST00000420138 CDC37L1Q7L3B6 337 aa24.59■■□□□ 1.53
GPC1-202ENST00000420138 LMBRD1Q9NUN5 540 aa24.59■■□□□ 1.53
GPC1-202ENST00000420138 FDPSP14324 419 aaKnown RBP24.58■■□□□ 1.53
GPC1-202ENST00000420138 HMGN5P82970 282 aaKnown RBP24.58■■□□□ 1.53
GPC1-202ENST00000420138 SEC23AQ15436 765 aa24.58■■□□□ 1.53
GPC1-202ENST00000420138 SOGA3Q5TF21 947 aa24.58■■□□□ 1.53
GPC1-202ENST00000420138 TTF2Q9UNY4 1162 aaKnown RBP24.58■■□□□ 1.53
GPC1-202ENST00000420138 VPS37CA5D8V6 355 aaPredicted RBP24.58■■□□□ 1.53
GPC1-202ENST00000420138 F8W031 263 aaPredicted RBP24.58■■□□□ 1.53
GPC1-202ENST00000420138 GOLGA6L22H0YM25 854 aa24.58■■□□□ 1.53
GPC1-202ENST00000420138 SKOR2Q2VWA4 1001 aaPredicted RBP24.58■■□□□ 1.53
GPC1-202ENST00000420138 DACT2Q5SW24 774 aa24.58■■□□□ 1.53
GPC1-202ENST00000420138 STRIP1Q5VSL9 837 aa24.58■■□□□ 1.53
GPC1-202ENST00000420138 CHMP4CQ96CF2 233 aa24.58■■□□□ 1.53
GPC1-202ENST00000420138 FER1L6Q2WGJ9 1857 aa24.58■■□□□ 1.52
GPC1-202ENST00000420138 ROBO3Q96MS0 1386 aa24.57■■□□□ 1.52
GPC1-202ENST00000420138 PLCG2P16885 1265 aa24.57■■□□□ 1.52
GPC1-202ENST00000420138 MAPKAPK5Q8IW41 473 aa24.57■■□□□ 1.52
GPC1-202ENST00000420138 FAM217BQ9NTX9 383 aaPredicted RBP24.57■■□□□ 1.52
GPC1-202ENST00000420138 LAMB1P07942 1786 aa24.57■■□□□ 1.52
GPC1-202ENST00000420138 PPFIA3O75145 1194 aa24.56■■□□□ 1.52
GPC1-202ENST00000420138 FKBP1AP62942 108 aaKnown RBP24.56■■□□□ 1.52
GPC1-202ENST00000420138 TEX11Q8IYF3 940 aa24.56■■□□□ 1.52
GPC1-202ENST00000420138 SCN9AQ15858 1988 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms