RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 ZSWIM8A7E2V4 1837 aa25.11■■□□□ 1.61
MCF2L-212ENST00000420013 ZBED9Q6R2W3 1325 aa25.11■■□□□ 1.61
MCF2L-212ENST00000420013 FOCADQ5VW36 1801 aa25.1■■□□□ 1.61
MCF2L-212ENST00000420013 NPM3O75607 178 aaKnown RBP25.1■■□□□ 1.61
MCF2L-212ENST00000420013 MECOMQ03112 1051 aa25.1■■□□□ 1.61
MCF2L-212ENST00000420013 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.1■■□□□ 1.61
MCF2L-212ENST00000420013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.1■■□□□ 1.61
MCF2L-212ENST00000420013 ATAD5Q96QE3 1844 aa25.09■■□□□ 1.61
MCF2L-212ENST00000420013 GPR75-ASB3A0A0A6YYF3 556 aa25.09■■□□□ 1.61
MCF2L-212ENST00000420013 LDHCP07864 332 aa25.09■■□□□ 1.61
MCF2L-212ENST00000420013 KIF22Q14807 665 aa25.09■■□□□ 1.61
MCF2L-212ENST00000420013 ZSCAN29Q8IWY8 852 aaPredicted RBP25.09■■□□□ 1.61
MCF2L-212ENST00000420013 SSH3Q8TE77 659 aa25.09■■□□□ 1.61
MCF2L-212ENST00000420013 KIAA0100Q14667 2235 aaKnown RBP25.09■■□□□ 1.61
MCF2L-212ENST00000420013 GNRH1P01148 92 aa25.08■■□□□ 1.61
MCF2L-212ENST00000420013 MAP3K10Q02779 954 aa25.08■■□□□ 1.61
MCF2L-212ENST00000420013 SCYL3Q8IZE3 742 aa25.08■■□□□ 1.61
MCF2L-212ENST00000420013 CDK5RAP2Q96SN8 1893 aa25.08■■□□□ 1.61
MCF2L-212ENST00000420013 CXCL11O14625 94 aa25.07■■□□□ 1.6
MCF2L-212ENST00000420013 IGSF3O75054 1194 aa25.07■■□□□ 1.6
MCF2L-212ENST00000420013 RHBDL3P58872 404 aa25.07■■□□□ 1.6
MCF2L-212ENST00000420013 ZFPM1Q8IX07 1006 aa25.07■■□□□ 1.6
MCF2L-212ENST00000420013 NSUN4Q96CB9 384 aaKnown RBP25.07■■□□□ 1.6
MCF2L-212ENST00000420013 PICK1Q9NRD5 415 aa25.07■■□□□ 1.6
MCF2L-212ENST00000420013 PHF20L1A8MW92 1017 aa25.06■■□□□ 1.6
MCF2L-212ENST00000420013 MCAMP43121 646 aa25.06■■□□□ 1.6
MCF2L-212ENST00000420013 PRMT2P55345 433 aa25.06■■□□□ 1.6
MCF2L-212ENST00000420013 LACTBP83111 547 aaPredicted RBP25.06■■□□□ 1.6
MCF2L-212ENST00000420013 CAP1Q01518 475 aa25.06■■□□□ 1.6
MCF2L-212ENST00000420013 PRPF38BQ5VTL8 546 aaKnown RBP25.06■■□□□ 1.6
MCF2L-212ENST00000420013 SH3BP5LQ7L8J4 393 aa25.06■■□□□ 1.6
MCF2L-212ENST00000420013 ITPRIPQ8IWB1 547 aa25.06■■□□□ 1.6
MCF2L-212ENST00000420013 ZNF384Q8TF68 577 aa25.06■■□□□ 1.6
MCF2L-212ENST00000420013 DDX4Q9NQI0 724 aaKnown RBP25.06■■□□□ 1.6
MCF2L-212ENST00000420013 ADGRA2Q96PE1 1338 aa25.06■■□□□ 1.6
MCF2L-212ENST00000420013 MGAMO43451 1857 aa25.05■■□□□ 1.6
MCF2L-212ENST00000420013 ATP8B2P98198 1209 aa25.05■■□□□ 1.6
MCF2L-212ENST00000420013 OS9Q13438 667 aaPredicted RBP25.05■■□□□ 1.6
MCF2L-212ENST00000420013 PICALMQ13492 652 aa25.05■■□□□ 1.6
MCF2L-212ENST00000420013 TNNI3KQ59H18 835 aa25.05■■□□□ 1.6
MCF2L-212ENST00000420013 PI16Q6UXB8 463 aa25.05■■□□□ 1.6
MCF2L-212ENST00000420013 PARK7Q99497 189 aaKnown RBP25.05■■□□□ 1.6
MCF2L-212ENST00000420013 FPGT-TNNI3KV9GXZ4 949 aa25.05■■□□□ 1.6
MCF2L-212ENST00000420013 LOC285556D6RIA3 1793 aa25.05■■□□□ 1.6
MCF2L-212ENST00000420013 DDTLA6NHG4 134 aaPredicted RBP25.04■■□□□ 1.6
MCF2L-212ENST00000420013 PDHXO00330 501 aa25.04■■□□□ 1.6
MCF2L-212ENST00000420013 C17orf99Q6UX52 265 aa25.04■■□□□ 1.6
MCF2L-212ENST00000420013 RAI14Q9P0K7 980 aa25.04■■□□□ 1.6
MCF2L-212ENST00000420013 MYO5AQ9Y4I1 1855 aaKnown RBP25.04■■□□□ 1.6
MCF2L-212ENST00000420013 TBC1D12O60347 775 aa25.03■■□□□ 1.6
MCF2L-212ENST00000420013 CTNND1O60716 968 aaKnown RBP25.03■■□□□ 1.6
MCF2L-212ENST00000420013 MOGSQ13724 837 aa25.03■■□□□ 1.6
MCF2L-212ENST00000420013 SLC9C1Q4G0N8 1177 aa25.03■■□□□ 1.6
MCF2L-212ENST00000420013 CCDC158Q5M9N0 1113 aa25.03■■□□□ 1.6
MCF2L-212ENST00000420013 TTC39AQ5SRH9 613 aa25.03■■□□□ 1.6
MCF2L-212ENST00000420013 NBPF11Q86T75 865 aa25.03■■□□□ 1.6
MCF2L-212ENST00000420013 ZNF333Q96JL9 665 aa25.03■■□□□ 1.6
MCF2L-212ENST00000420013 ZNF512BQ96KM6 892 aaPredicted RBP25.03■■□□□ 1.6
MCF2L-212ENST00000420013 NOP58Q9Y2X3 529 aaKnown RBP25.03■■□□□ 1.6
MCF2L-212ENST00000420013 PTCH2Q9Y6C5 1203 aa25.03■■□□□ 1.6
MCF2L-212ENST00000420013 SIPA1L1O43166 1804 aa25.02■■□□□ 1.6
MCF2L-212ENST00000420013 A0A0G2JLL6 359 aaPredicted RBP25.02■■□□□ 1.6
MCF2L-212ENST00000420013 PTPRAP18433 802 aa25.02■■□□□ 1.6
MCF2L-212ENST00000420013 FASTKD5Q7L8L6 764 aaKnown RBP25.02■■□□□ 1.6
MCF2L-212ENST00000420013 PRRT2Q7Z6L0 340 aaPredicted RBP25.02■■□□□ 1.6
MCF2L-212ENST00000420013 NOL10Q9BSC4 688 aaKnown RBP25.02■■□□□ 1.6
MCF2L-212ENST00000420013 LRP2BPQ9P2M1 347 aa25.02■■□□□ 1.6
MCF2L-212ENST00000420013 BRCA2P51587 3418 aa25.02■■□□□ 1.6
MCF2L-212ENST00000420013 OSBPL5Q9H0X9 879 aaPredicted RBP25.01■■□□□ 1.59
MCF2L-212ENST00000420013 SLC45A1Q9Y2W3 748 aa25.01■■□□□ 1.59
MCF2L-212ENST00000420013 ZBTB7BO15156 539 aaPredicted RBP25■■□□□ 1.59
MCF2L-212ENST00000420013 SURF6O75683 361 aaKnown RBP25■■□□□ 1.59
MCF2L-212ENST00000420013 RLBP1P12271 317 aa25■■□□□ 1.59
MCF2L-212ENST00000420013 PLCG2P16885 1265 aa25■■□□□ 1.59
MCF2L-212ENST00000420013 TBC1D9Q6ZT07 1266 aa25■■□□□ 1.59
MCF2L-212ENST00000420013 DBNDD2Q9BQY9 259 aa25■■□□□ 1.59
MCF2L-212ENST00000420013 C1orf115Q9H7X2 142 aa25■■□□□ 1.59
MCF2L-212ENST00000420013 POTEFA5A3E0 1075 aa24.99■■□□□ 1.59
MCF2L-212ENST00000420013 SLC34A2O95436 690 aa24.99■■□□□ 1.59
MCF2L-212ENST00000420013 TEX11Q8IYF3 940 aa24.99■■□□□ 1.59
MCF2L-212ENST00000420013 TBC1D2Q9BYX2 928 aa24.99■■□□□ 1.59
MCF2L-212ENST00000420013 AFG3L2Q9Y4W6 797 aa24.99■■□□□ 1.59
MCF2L-212ENST00000420013 ZHX2Q9Y6X8 837 aa24.99■■□□□ 1.59
MCF2L-212ENST00000420013 BAG3O95817 575 aa24.98■■□□□ 1.59
MCF2L-212ENST00000420013 NAA16Q6N069 864 aaPredicted RBP24.98■■□□□ 1.59
MCF2L-212ENST00000420013 GPAT2Q6NUI2 795 aa24.98■■□□□ 1.59
MCF2L-212ENST00000420013 TMEM106CQ9BVX2 250 aa24.98■■□□□ 1.59
MCF2L-212ENST00000420013 ARHGAP39Q9C0H5 1083 aa24.98■■□□□ 1.59
MCF2L-212ENST00000420013 CPA4Q9UI42 421 aa24.98■■□□□ 1.59
MCF2L-212ENST00000420013 MKI67P46013 3256 aaKnown RBP24.97■■□□□ 1.59
MCF2L-212ENST00000420013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.97■■□□□ 1.593e-6■■□□□ 12.6
MCF2L-212ENST00000420013 HERC5Q9UII4 1024 aaKnown RBP24.97■■□□□ 1.59
MCF2L-212ENST00000420013 MS4A1P11836 297 aa24.96■■□□□ 1.59
MCF2L-212ENST00000420013 HOXD10P28358 340 aa24.96■■□□□ 1.59
MCF2L-212ENST00000420013 CEP85Q6P2H3 762 aa24.96■■□□□ 1.59
MCF2L-212ENST00000420013 ERC1Q8IUD2 1116 aa24.96■■□□□ 1.59
MCF2L-212ENST00000420013 BCRP11274 1271 aa24.95■■□□□ 1.58
MCF2L-212ENST00000420013 PSMC4P43686 418 aa24.95■■□□□ 1.58
MCF2L-212ENST00000420013 DHX36Q9H2U1 1008 aaKnown RBP24.95■■□□□ 1.58
MCF2L-212ENST00000420013 SRRDQ9UH36 339 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms