RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.34□□□□□ -0.11
THUMPD3-204ENST00000419437 MIGA2Q7L4E1 593 aa14.34□□□□□ -0.11
THUMPD3-204ENST00000419437 ZFPM1Q8IX07 1006 aa14.34□□□□□ -0.11
THUMPD3-204ENST00000419437 RHPN1Q8TCX5 695 aa14.34□□□□□ -0.11
THUMPD3-204ENST00000419437 CD99L2Q8TCZ2 262 aa14.34□□□□□ -0.11
THUMPD3-204ENST00000419437 FAM198AQ9UFP1 575 aa14.34□□□□□ -0.11
THUMPD3-204ENST00000419437 POTEFA5A3E0 1075 aa14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 LDHCP07864 332 aa14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 BTDP43251 543 aa14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 ZAP70P43403 619 aa14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 AACSQ86V21 672 aa14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 ZNF384Q8TF68 577 aa14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 NSUN4Q96CB9 384 aaKnown RBP14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 HOOK2Q96ED9 719 aa14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 ZCCHC17Q9NP64 241 aaKnown RBP14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 CSADQ9Y600 493 aa14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 CEP290O15078 2479 aa14.33□□□□□ -0.12
THUMPD3-204ENST00000419437 GPR75-ASB3A0A0A6YYF3 556 aa14.32□□□□□ -0.12
THUMPD3-204ENST00000419437 CYP2E1P05181 493 aaPredicted RBP14.32□□□□□ -0.12
THUMPD3-204ENST00000419437 RGS3P49796 1198 aa14.32□□□□□ -0.12
THUMPD3-204ENST00000419437 GSTO1P78417 241 aa14.32□□□□□ -0.12
THUMPD3-204ENST00000419437 VGLL4Q14135 290 aa14.32□□□□□ -0.12
THUMPD3-204ENST00000419437 ZFYVE28Q9HCC9 887 aa14.32□□□□□ -0.12
THUMPD3-204ENST00000419437 MROH7-TTC4A0A0A0MT08 1334 aa14.32□□□□□ -0.12
THUMPD3-204ENST00000419437 GAKO14976 1311 aa14.32□□□□□ -0.12
THUMPD3-204ENST00000419437 CCL15-CCL14A0A0B4J2E2 113 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 WDHD1O75717 1129 aaPredicted RBP14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 PICALMQ13492 652 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 TAF1CQ15572 869 aaPredicted RBP14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 CCL15Q16663 113 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 DCAF15Q66K64 600 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 NBPF11Q86T75 865 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 ZSCAN29Q8IWY8 852 aaPredicted RBP14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 CLASRPQ8N2M8 674 aaKnown RBP14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 BRI3BPQ8WY22 251 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 ZKSCAN4Q969J2 545 aaPredicted RBP14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 KIF1BPQ96EK5 621 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 ZNF512BQ96KM6 892 aaPredicted RBP14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 WRNIP1Q96S55 665 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 IDI2Q9BXS1 227 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 MYH2Q9UKX2 1941 aa14.31□□□□□ -0.12
THUMPD3-204ENST00000419437 SPDYE5A6NIY4 337 aa14.3□□□□□ -0.12
THUMPD3-204ENST00000419437 RAB11FIP3O75154 756 aa14.3□□□□□ -0.12
THUMPD3-204ENST00000419437 NAA16Q6N069 864 aaPredicted RBP14.3□□□□□ -0.12
THUMPD3-204ENST00000419437 ZNF333Q96JL9 665 aa14.3□□□□□ -0.12
THUMPD3-204ENST00000419437 TMEM106CQ9BVX2 250 aa14.3□□□□□ -0.12
THUMPD3-204ENST00000419437 ZNF341Q9BYN7 854 aa14.3□□□□□ -0.12
THUMPD3-204ENST00000419437 DDX4Q9NQI0 724 aaKnown RBP14.3□□□□□ -0.12
THUMPD3-204ENST00000419437 NDUFB9Q9Y6M9 179 aa14.3□□□□□ -0.12
THUMPD3-204ENST00000419437 SZT2Q5T011 3432 aa14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 AK9Q5TCS8 1911 aa14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 ENTPD3O75355 529 aa14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 IFIT2P09913 472 aaKnown RBP14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 CETPP11597 493 aa14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 INPP5BP32019 993 aa14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 RHBDL3P58872 404 aa14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 CAP1Q01518 475 aa14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 SLC9C1Q4G0N8 1177 aa14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 HABP4Q5JVS0 413 aaKnown RBP14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 ERO1BQ86YB8 467 aa14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 NOL10Q9BSC4 688 aaKnown RBP14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 PIH1D3Q9NQM4 214 aaKnown RBP14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 RPAP1Q9BWH6 1393 aaPredicted RBP14.29□□□□□ -0.12
THUMPD3-204ENST00000419437 DDTLA6NHG4 134 aaPredicted RBP14.28□□□□□ -0.12
THUMPD3-204ENST00000419437 IDH1O75874 414 aaKnown RBP14.28□□□□□ -0.12
THUMPD3-204ENST00000419437 GNRH1P01148 92 aa14.28□□□□□ -0.12
THUMPD3-204ENST00000419437 EN2P19622 333 aaPredicted RBP14.28□□□□□ -0.12
THUMPD3-204ENST00000419437 SH3BP5LQ7L8J4 393 aa14.28□□□□□ -0.12
THUMPD3-204ENST00000419437 FAM43AQ8N2R8 423 aa14.28□□□□□ -0.12
THUMPD3-204ENST00000419437 ANTXR1Q9H6X2 564 aa14.28□□□□□ -0.12
THUMPD3-204ENST00000419437 SNCAIPQ9Y6H5 919 aa14.28□□□□□ -0.12
THUMPD3-204ENST00000419437 TLR2O60603 784 aa14.27□□□□□ -0.13
THUMPD3-204ENST00000419437 BAG3O95817 575 aa14.27□□□□□ -0.13
THUMPD3-204ENST00000419437 SLURP2P0DP57 97 aa14.27□□□□□ -0.13
THUMPD3-204ENST00000419437 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
THUMPD3-204ENST00000419437 SNAPC2Q13487 334 aa14.27□□□□□ -0.13
THUMPD3-204ENST00000419437 TEX11Q8IYF3 940 aa14.27□□□□□ -0.13
THUMPD3-204ENST00000419437 SH3RF3Q8TEJ3 882 aaPredicted RBP14.27□□□□□ -0.13
THUMPD3-204ENST00000419437 AATFQ9NY61 560 aaKnown RBP eCLIP14.27□□□□□ -0.13
THUMPD3-204ENST00000419437 SMARCA5O60264 1052 aaPredicted RBP14.26□□□□□ -0.13
THUMPD3-204ENST00000419437 CYP7A1P22680 504 aa14.26□□□□□ -0.13
THUMPD3-204ENST00000419437 PRMT2P55345 433 aa14.26□□□□□ -0.13
THUMPD3-204ENST00000419437 PPIL2Q13356 520 aa14.26□□□□□ -0.13
THUMPD3-204ENST00000419437 KIF22Q14807 665 aa14.26□□□□□ -0.13
THUMPD3-204ENST00000419437 ZNF112Q9UJU3 913 aa14.26□□□□□ -0.13
THUMPD3-204ENST00000419437 PTCH2Q9Y6C5 1203 aa14.26□□□□□ -0.13
THUMPD3-204ENST00000419437 MAP4K4O95819 1239 aaPredicted RBP14.25□□□□□ -0.13
THUMPD3-204ENST00000419437 PPP4CP60510 307 aa14.25□□□□□ -0.13
THUMPD3-204ENST00000419437 DYNLL1P63167 89 aaKnown RBP14.25□□□□□ -0.13
THUMPD3-204ENST00000419437 LACTBP83111 547 aaPredicted RBP14.25□□□□□ -0.13
THUMPD3-204ENST00000419437 PPATQ06203 517 aa14.25□□□□□ -0.13
THUMPD3-204ENST00000419437 ADGRA1Q86SQ6 560 aa14.25□□□□□ -0.13
THUMPD3-204ENST00000419437 LRRCC1Q9C099 1032 aa14.25□□□□□ -0.13
THUMPD3-204ENST00000419437 ZSWIM8A7E2V4 1837 aa14.25□□□□□ -0.13
THUMPD3-204ENST00000419437 PHF20L1A8MW92 1017 aa14.24□□□□□ -0.13
THUMPD3-204ENST00000419437 BTBD19C9JJ37 291 aa14.24□□□□□ -0.13
THUMPD3-204ENST00000419437 IRF6O14896 467 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms