RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 USP17L21D6R901 530 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 PFKFB2O60825 505 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 CRKP46108 304 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 FGD1P98174 961 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 PPP4R3BQ5MIZ7 849 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 APOBEC3HQ6NTF7 200 aaKnown RBP11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 Q6ZUG5 572 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 SDR42E1Q8WUS8 393 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 DPF2Q92785 391 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 NBPF3Q9H094 633 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 TCP11L1Q9NUJ3 509 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 ANGEL1Q9UNK9 670 aaKnown RBP11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 TIAM2Q8IVF5 1701 aa11.91□□□□□ -0.5
HMGA1P6-201ENST00000418454 ERICH2A1L162 156 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 YDJCA8MPS7 323 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 PRC1O43663 620 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 ENTPD3O75355 529 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 PDCP20941 246 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 BRCA1P38398 1863 aaKnown RBP11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 SLC4A3P48751 1232 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 DIXDC1Q155Q3 683 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 GRIK5Q16478 980 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 CLEC17AQ6ZS10 378 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 SLC51AQ86UW1 340 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 IQCA1Q86XH1 822 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 TEX11Q8IYF3 940 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 IGDCC4Q8TDY8 1250 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 SH3RF3Q8TEJ3 882 aaPredicted RBP11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 ANKS1AQ92625 1134 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 MAP3K14Q99558 947 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 EHD4Q9H223 541 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 MCM9Q9NXL9 1143 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 ZSWIM5Q9P217 1185 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 SWAP70Q9UH65 585 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 TPCN1Q9ULQ1 816 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 TAF6LQ9Y6J9 622 aa11.9□□□□□ -0.5
HMGA1P6-201ENST00000418454 COL2A1P02458 1487 aaPredicted RBP11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 MYO5AQ9Y4I1 1855 aaKnown RBP11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 LAMA4Q16363 1823 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 CCDC196A0A1B0GTZ2 297 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 MINDY4BA8MYZ0 360 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 FZD9O00144 591 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 HAND2P61296 217 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 HMGN5P82970 282 aaKnown RBP11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 ME3Q16798 604 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 CIAPIN1Q6FI81 312 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 DGKHQ86XP1 1220 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 TBC1D10CQ8IV04 446 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 SLKQ9H2G2 1235 aaPredicted RBP11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 ZNF277Q9NRM2 450 aaPredicted RBP11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 USP40Q9NVE5 1235 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 BCS1LQ9Y276 419 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 NID2Q14112 1375 aa11.89□□□□□ -0.51
HMGA1P6-201ENST00000418454 NFKBIEO00221 500 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 SH2B2O14492 632 aaPredicted RBP11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 POLR3DP05423 398 aaPredicted RBP11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 USP17L8P0C7I0 530 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 CALM1P0DP23 149 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 CALM2P0DP24 149 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 CALM3P0DP25 149 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 PDIA3P30101 505 aaKnown RBP11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 SYNE3Q6ZMZ3 975 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 METTL16Q86W50 562 aaKnown RBP11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 TGFBRAP1Q8WUH2 860 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 BRF1Q92994 677 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 GTF3C6Q969F1 213 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 JAG2Q9Y219 1238 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 FER1L6Q2WGJ9 1857 aa11.88□□□□□ -0.51
HMGA1P6-201ENST00000418454 FLT1P17948 1338 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 CDKL5O76039 1030 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 CPA1P15085 419 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 PTMSP20962 102 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 NOVP48745 357 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 EIF6P56537 245 aaKnown RBP11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 ANTXR2P58335 489 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 ZNF280AP59817 542 aaPredicted RBP11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 CXCL9Q07325 125 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 RAB3GAP1Q15042 981 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 CDC42EP5Q6NZY7 148 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 CPLX2Q6PUV4 134 aaKnown RBP11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 C16orf86Q6ZW13 317 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 ZNF444Q8N0Y2 327 aaPredicted RBP11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 SMARCC2Q8TAQ2 1214 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 CCDC17Q96LX7 622 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 UBAC1Q9BSL1 405 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 PPP1R1BQ9UD71 204 aaPredicted RBP11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 PSME4Q14997 1843 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 ARFGEF1Q9Y6D6 1849 aa11.87□□□□□ -0.51
HMGA1P6-201ENST00000418454 B4E1Z4 1266 aa11.86□□□□□ -0.51
HMGA1P6-201ENST00000418454 PSMD14O00487 310 aa11.86□□□□□ -0.51
HMGA1P6-201ENST00000418454 IFIT3O14879 490 aaKnown RBP11.86□□□□□ -0.51
HMGA1P6-201ENST00000418454 MYO1BO43795 1136 aa11.86□□□□□ -0.51
HMGA1P6-201ENST00000418454 KDM4AO75164 1064 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms