RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 RLBP1P12271 317 aa22.65■■□□□ 1.22
VPS16-204ENST00000417508 TNNI3KQ59H18 835 aa22.65■■□□□ 1.22
VPS16-204ENST00000417508 ZSCAN29Q8IWY8 852 aaPredicted RBP22.65■■□□□ 1.22
VPS16-204ENST00000417508 CD99L2Q8TCZ2 262 aa22.65■■□□□ 1.22
VPS16-204ENST00000417508 NSUN4Q96CB9 384 aaKnown RBP22.65■■□□□ 1.22
VPS16-204ENST00000417508 PTPN22Q9Y2R2 807 aa22.65■■□□□ 1.22
VPS16-204ENST00000417508 FPGT-TNNI3KV9GXZ4 949 aa22.65■■□□□ 1.22
VPS16-204ENST00000417508 PDE4DIPQ5VU43 2346 aa22.65■■□□□ 1.22
VPS16-204ENST00000417508 TLR2O60603 784 aa22.64■■□□□ 1.21
VPS16-204ENST00000417508 MCAMP43121 646 aa22.64■■□□□ 1.21
VPS16-204ENST00000417508 ZNF512BQ96KM6 892 aaPredicted RBP22.64■■□□□ 1.21
VPS16-204ENST00000417508 RAI14Q9P0K7 980 aa22.64■■□□□ 1.21
VPS16-204ENST00000417508 LRP2BPQ9P2M1 347 aa22.64■■□□□ 1.21
VPS16-204ENST00000417508 RFX7Q2KHR2 1363 aa22.63■■□□□ 1.21
VPS16-204ENST00000417508 PHF20L1A8MW92 1017 aa22.63■■□□□ 1.21
VPS16-204ENST00000417508 CXCL11O14625 94 aa22.63■■□□□ 1.21
VPS16-204ENST00000417508 RHBDL3P58872 404 aa22.63■■□□□ 1.21
VPS16-204ENST00000417508 TBC1D9Q6ZT07 1266 aa22.63■■□□□ 1.21
VPS16-204ENST00000417508 ANKRD23Q86SG2 305 aa22.63■■□□□ 1.21
VPS16-204ENST00000417508 ZNF384Q8TF68 577 aa22.63■■□□□ 1.21
VPS16-204ENST00000417508 TBC1D12O60347 775 aa22.62■■□□□ 1.21
VPS16-204ENST00000417508 TTC39AQ5SRH9 613 aa22.62■■□□□ 1.21
VPS16-204ENST00000417508 PI16Q6UXB8 463 aa22.62■■□□□ 1.21
VPS16-204ENST00000417508 SH3BP5LQ7L8J4 393 aa22.62■■□□□ 1.21
VPS16-204ENST00000417508 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.62■■□□□ 1.21
VPS16-204ENST00000417508 ATRNL1Q5VV63 1379 aa22.62■■□□□ 1.21
VPS16-204ENST00000417508 DDTLA6NHG4 134 aaPredicted RBP22.61■■□□□ 1.21
VPS16-204ENST00000417508 CTNND1O60716 968 aaKnown RBP22.61■■□□□ 1.21
VPS16-204ENST00000417508 KIF22Q14807 665 aa22.61■■□□□ 1.21
VPS16-204ENST00000417508 SCYL3Q8IZE3 742 aa22.61■■□□□ 1.21
VPS16-204ENST00000417508 C1orf115Q9H7X2 142 aa22.61■■□□□ 1.21
VPS16-204ENST00000417508 DDX4Q9NQI0 724 aaKnown RBP22.61■■□□□ 1.21
VPS16-204ENST00000417508 PICK1Q9NRD5 415 aa22.61■■□□□ 1.21
VPS16-204ENST00000417508 DOCK2Q92608 1830 aa22.6■■□□□ 1.21
VPS16-204ENST00000417508 GNRH1P01148 92 aa22.6■■□□□ 1.21
VPS16-204ENST00000417508 PICALMQ13492 652 aa22.6■■□□□ 1.21
VPS16-204ENST00000417508 DBNDD2Q9BQY9 259 aa22.6■■□□□ 1.21
VPS16-204ENST00000417508 NOL10Q9BSC4 688 aaKnown RBP22.6■■□□□ 1.21
VPS16-204ENST00000417508 BAG3O95817 575 aa22.59■■□□□ 1.21
VPS16-204ENST00000417508 PLCG2P16885 1265 aa22.58■■□□□ 1.21
VPS16-204ENST00000417508 PTPRAP18433 802 aa22.58■■□□□ 1.21
VPS16-204ENST00000417508 CEP85Q6P2H3 762 aa22.58■■□□□ 1.21
VPS16-204ENST00000417508 FASTKD5Q7L8L6 764 aaKnown RBP22.58■■□□□ 1.21
VPS16-204ENST00000417508 ERC1Q8IUD2 1116 aa22.58■■□□□ 1.21
VPS16-204ENST00000417508 ZHX2Q9Y6X8 837 aa22.58■■□□□ 1.21
VPS16-204ENST00000417508 KIAA0100Q14667 2235 aaKnown RBP22.57■■□□□ 1.2
VPS16-204ENST00000417508 PDHXO00330 501 aa22.57■■□□□ 1.2
VPS16-204ENST00000417508 HSP90AB4PQ58FF6 505 aa22.57■■□□□ 1.2
VPS16-204ENST00000417508 NAA16Q6N069 864 aaPredicted RBP22.57■■□□□ 1.2
VPS16-204ENST00000417508 C17orf99Q6UX52 265 aa22.57■■□□□ 1.2
VPS16-204ENST00000417508 ARMC5Q96C12 935 aa22.57■■□□□ 1.2
VPS16-204ENST00000417508 SNRKQ9NRH2 765 aa22.57■■□□□ 1.2
VPS16-204ENST00000417508 COL2A1P02458 1487 aaPredicted RBP22.56■■□□□ 1.2
VPS16-204ENST00000417508 PRMT2P55345 433 aa22.56■■□□□ 1.2
VPS16-204ENST00000417508 PPP4CP60510 307 aa22.56■■□□□ 1.2
VPS16-204ENST00000417508 LACTBP83111 547 aaPredicted RBP22.56■■□□□ 1.2
VPS16-204ENST00000417508 MOGSQ13724 837 aa22.56■■□□□ 1.2
VPS16-204ENST00000417508 NBPF11Q86T75 865 aa22.56■■□□□ 1.2
VPS16-204ENST00000417508 TEX11Q8IYF3 940 aa22.56■■□□□ 1.2
VPS16-204ENST00000417508 PANK1Q8TE04 598 aa22.56■■□□□ 1.2
VPS16-204ENST00000417508 AFG3L2Q9Y4W6 797 aa22.56■■□□□ 1.2
VPS16-204ENST00000417508 CYP2E1P05181 493 aaPredicted RBP22.55■■□□□ 1.2
VPS16-204ENST00000417508 CAP1Q01518 475 aa22.55■■□□□ 1.2
VPS16-204ENST00000417508 EAF2Q96CJ1 260 aaPredicted RBP22.55■■□□□ 1.2
VPS16-204ENST00000417508 OSBPL5Q9H0X9 879 aaPredicted RBP22.55■■□□□ 1.2
VPS16-204ENST00000417508 DHX36Q9H2U1 1008 aaKnown RBP22.55■■□□□ 1.2
VPS16-204ENST00000417508 CHMP4BQ9H444 224 aaKnown RBP22.55■■□□□ 1.2
VPS16-204ENST00000417508 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.55■■□□□ 1.2
VPS16-204ENST00000417508 DBNLQ9UJU6 430 aaKnown RBP22.55■■□□□ 1.2
VPS16-204ENST00000417508 A0A0G2JLL6 359 aaPredicted RBP22.54■■□□□ 1.2
VPS16-204ENST00000417508 TMED8Q6PL24 325 aaPredicted RBP22.54■■□□□ 1.2
VPS16-204ENST00000417508 PRRT2Q7Z6L0 340 aaPredicted RBP22.54■■□□□ 1.2
VPS16-204ENST00000417508 PARK7Q99497 189 aaKnown RBP22.54■■□□□ 1.2
VPS16-204ENST00000417508 SLC45A1Q9Y2W3 748 aa22.54■■□□□ 1.2
VPS16-204ENST00000417508 ZAP70P43403 619 aa22.53■■□□□ 1.2
VPS16-204ENST00000417508 GPAT2Q6NUI2 795 aa22.53■■□□□ 1.2
VPS16-204ENST00000417508 RPAP2Q8IXW5 612 aaPredicted RBP22.53■■□□□ 1.2
VPS16-204ENST00000417508 TBC1D2Q9BYX2 928 aa22.53■■□□□ 1.2
VPS16-204ENST00000417508 CCDC8Q9H0W5 538 aaPredicted RBP22.53■■□□□ 1.2
VPS16-204ENST00000417508 PI4KBQ9UBF8 816 aa22.53■■□□□ 1.2
VPS16-204ENST00000417508 HERC5Q9UII4 1024 aaKnown RBP22.53■■□□□ 1.2
VPS16-204ENST00000417508 DDX19BQ9UMR2 479 aa22.53■■□□□ 1.2
VPS16-204ENST00000417508 HOXD10P28358 340 aa22.52■■□□□ 1.2
VPS16-204ENST00000417508 SH3RF3Q8TEJ3 882 aaPredicted RBP22.52■■□□□ 1.2
VPS16-204ENST00000417508 SLC9C1Q4G0N8 1177 aa22.51■■□□□ 1.19
VPS16-204ENST00000417508 CERS3Q8IU89 383 aa22.51■■□□□ 1.19
VPS16-204ENST00000417508 AATFQ9NY61 560 aaKnown RBP eCLIP22.51■■□□□ 1.19
VPS16-204ENST00000417508 CPA4Q9UI42 421 aa22.51■■□□□ 1.19
VPS16-204ENST00000417508 DOCK1Q14185 1865 aa22.51■■□□□ 1.19
VPS16-204ENST00000417508 ADGRA2Q96PE1 1338 aa22.51■■□□□ 1.19
VPS16-204ENST00000417508 HMMRO75330 724 aa22.5■■□□□ 1.19
VPS16-204ENST00000417508 FOXP4Q8IVH2 680 aaPredicted RBP22.5■■□□□ 1.19
VPS16-204ENST00000417508 TMEM106CQ9BVX2 250 aa22.5■■□□□ 1.19
VPS16-204ENST00000417508 EXOC6BQ9Y2D4 811 aa22.5■■□□□ 1.19
VPS16-204ENST00000417508 PTCH2Q9Y6C5 1203 aa22.5■■□□□ 1.19
VPS16-204ENST00000417508 CAP2P40123 477 aa22.49■■□□□ 1.19
VPS16-204ENST00000417508 PSMC4P43686 418 aa22.49■■□□□ 1.19
VPS16-204ENST00000417508 ZNF333Q96JL9 665 aa22.49■■□□□ 1.19
VPS16-204ENST00000417508 ARHGAP39Q9C0H5 1083 aa22.49■■□□□ 1.19
VPS16-204ENST00000417508 PIH1D3Q9NQM4 214 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms