RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ATP2B1P20020 1258 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 BMP6P22004 513 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 TRIM29Q14134 588 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 ELF2Q15723 593 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.27
HDAC9-208ENST00000417496 ZNF512BQ96KM6 892 aaPredicted RBP16.71■□□□□ 0.27
HDAC9-208ENST00000417496 BTG4Q9NY30 223 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 TUBE1Q9UJT0 475 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 MYO5AQ9Y4I1 1855 aaKnown RBP16.71■□□□□ 0.27
HDAC9-208ENST00000417496 TMEM232C9JQI7 657 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 SMIM22K7EJ46 135 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 PDE8AO60658 829 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 SERPINC1P01008 464 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 ARID4AP29374 1257 aaPredicted RBP16.71■□□□□ 0.27
HDAC9-208ENST00000417496 UBASH3AP57075 661 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 PUM3Q15397 648 aaKnown RBP16.71■□□□□ 0.27
HDAC9-208ENST00000417496 DZIP3Q86Y13 1208 aaKnown RBP16.71■□□□□ 0.27
HDAC9-208ENST00000417496 MIGA1Q8NAN2 632 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 FANCLQ9NW38 375 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 IQSEC3Q9UPP2 1182 aaPredicted RBP16.71■□□□□ 0.27
HDAC9-208ENST00000417496 PCDHA5Q9Y5H7 936 aa16.71■□□□□ 0.27
HDAC9-208ENST00000417496 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
HDAC9-208ENST00000417496 PPP6R2O75170 966 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 TPM4P67936 248 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 PDE4BQ07343 736 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 KMT5BQ4FZB7 885 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 RESP18Q5W5W9 173 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 LPIN2Q92539 896 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 TMEM87BQ96K49 555 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 KCNH3Q9ULD8 1083 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 BCAMP50895 628 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 CFAP100Q494V2 611 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 CNNM3Q8NE01 707 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
HDAC9-208ENST00000417496 GSG1L2A8MUP6 293 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 FGFR2P21802 821 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 TOB1P50616 345 aaPredicted RBP16.69■□□□□ 0.26
HDAC9-208ENST00000417496 DMTNQ08495 405 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 SSRP1Q08945 709 aaKnown RBP16.69■□□□□ 0.26
HDAC9-208ENST00000417496 SYCP1Q15431 976 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 LCORLQ8N3X6 602 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 JMYQ8N9B5 988 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 TOGARAM1Q9Y4F4 1720 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 NR5A1Q13285 461 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 SGMS1Q86VZ5 419 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 GRAMD1CQ8IYS0 662 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 CCDC150Q8NCX0 1101 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 TIGD1Q96MW7 591 aa16.69■□□□□ 0.26
HDAC9-208ENST00000417496 IKBKBO14920 756 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 MYL5Q02045 173 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 KRBA2Q6ZNG9 492 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 PDILTQ8N807 584 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 CGNQ9P2M7 1197 aaKnown RBP16.68■□□□□ 0.26
HDAC9-208ENST00000417496 C4AP0C0L4 1744 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 C4BP0C0L5 1744 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 SHANK3Q9BYB0 1731 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 WTIPA6NIX2 430 aaPredicted RBP16.68■□□□□ 0.26
HDAC9-208ENST00000417496 UQCRFS1P1P0C7P4 283 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 MAP3K12Q12852 859 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 AKNAD1Q5T1N1 836 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 SUSD4Q5VX71 490 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 MFSD6Q6ZSS7 791 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 NOSTRINQ8IVI9 506 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 DIS3L2Q8IYB7 885 aaKnown RBP16.68■□□□□ 0.26
HDAC9-208ENST00000417496 NUP133Q8WUM0 1156 aa16.68■□□□□ 0.26
HDAC9-208ENST00000417496 TDO2P48775 406 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 FBXO38Q6PIJ6 1188 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 HOMER1Q86YM7 354 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.67■□□□□ 0.26
HDAC9-208ENST00000417496 SLC4A4Q9Y6R1 1079 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 ATRNO75882 1429 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 LIFRP42702 1097 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 USP49Q70CQ1 688 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 OXER1Q8TDS5 423 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 FEZ1Q99689 392 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 UTP14AQ9BVJ6 771 aaKnown RBP16.67■□□□□ 0.26
HDAC9-208ENST00000417496 KCND1Q9NSA2 647 aa16.67■□□□□ 0.26
HDAC9-208ENST00000417496 hCG_1642624A0A1W2PR95 340 aa16.66■□□□□ 0.26
HDAC9-208ENST00000417496 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
HDAC9-208ENST00000417496 SLU7O95391 586 aaKnown RBP16.66■□□□□ 0.26
HDAC9-208ENST00000417496 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
HDAC9-208ENST00000417496 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
HDAC9-208ENST00000417496 ERCC6LQ2NKX8 1250 aa16.66■□□□□ 0.26
HDAC9-208ENST00000417496 KRI1Q8N9T8 703 aaKnown RBP16.66■□□□□ 0.26
HDAC9-208ENST00000417496 OGFRQ9NZT2 677 aa16.66■□□□□ 0.26
HDAC9-208ENST00000417496 PCDHB6Q9Y5E3 794 aa16.66■□□□□ 0.26
HDAC9-208ENST00000417496 CUTAO60888 179 aa16.66■□□□□ 0.26
HDAC9-208ENST00000417496 MMP1P03956 469 aa16.66■□□□□ 0.26
HDAC9-208ENST00000417496 TRMT44Q8IYL2 757 aaKnown RBP16.66■□□□□ 0.26
HDAC9-208ENST00000417496 INTS13Q9NVM9 706 aa16.66■□□□□ 0.26
HDAC9-208ENST00000417496 DDX41Q9UJV9 622 aaKnown RBP16.66■□□□□ 0.26
HDAC9-208ENST00000417496 FANCGO15287 622 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 SLC5A1P13866 664 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 MDM2Q00987 491 aaPredicted RBP16.65■□□□□ 0.26
HDAC9-208ENST00000417496 ALX1Q15699 326 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 OLFM4Q6UX06 510 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 ZNF34Q8IZ26 560 aa16.65■□□□□ 0.26
HDAC9-208ENST00000417496 FAM177A1Q8N128 213 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms