RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 DPY19L2Q6NUT2 758 aa10.26□□□□□ -0.77
SP140-204ENST00000417495 PLEKHM2Q8IWE5 1019 aa10.26□□□□□ -0.77
SP140-204ENST00000417495 RNF39Q9H2S5 420 aa10.26□□□□□ -0.77
SP140-204ENST00000417495 SPATS2LQ9NUQ6 558 aaKnown RBP10.26□□□□□ -0.77
SP140-204ENST00000417495 LCMT1Q9UIC8 334 aa10.26□□□□□ -0.77
SP140-204ENST00000417495 TOGARAM1Q9Y4F4 1720 aa10.26□□□□□ -0.77
SP140-204ENST00000417495 ADCY9O60503 1353 aa10.26□□□□□ -0.77
SP140-204ENST00000417495 PCDH11XQ9BZA7 1347 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 PCDH11YQ9BZA8 1340 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 FAM177BA6PVY3 158 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 LILRB3O75022 631 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 USP8P40818 1118 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 IFT88Q13099 833 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 BEND3Q5T5X7 828 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 G2E3Q7L622 706 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 PLPP6Q8IY26 295 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 TEX11Q8IYF3 940 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 CRACR2AQ9BSW2 395 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 IRF2BPLQ9H1B7 796 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 NUCB2P80303 420 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 TBC1D8BQ0IIM8 1120 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 KRT24Q2M2I5 525 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 ZNF397Q8NF99 534 aaPredicted RBP10.25□□□□□ -0.77
SP140-204ENST00000417495 GOLGA5Q8TBA6 731 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 LGR6Q9HBX8 967 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 ROBO1Q9Y6N7 1651 aa10.25□□□□□ -0.77
SP140-204ENST00000417495 DDX58O95786 925 aaKnown RBP10.24□□□□□ -0.77
SP140-204ENST00000417495 CCDC15Q0P6D6 951 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 PLEKHG6Q3KR16 790 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 KSR2Q6VAB6 950 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 FBXO18Q8NFZ0 1043 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 TDRD7Q8NHU6 1098 aaKnown RBP10.24□□□□□ -0.77
SP140-204ENST00000417495 HLA-CQ95604 372 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 FMNL2Q96PY5 1086 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 MEIS3Q99687 375 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 A1CFQ9NQ94 594 aaKnown RBP10.24□□□□□ -0.77
SP140-204ENST00000417495 COL4A3BPQ9Y5P4 624 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 ELL2O00472 640 aaPredicted RBP10.24□□□□□ -0.77
SP140-204ENST00000417495 FOXK1P85037 733 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 KLHL40Q2TBA0 621 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 ZNF483Q8TF39 744 aaPredicted RBP10.24□□□□□ -0.77
SP140-204ENST00000417495 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 LRRC59Q96AG4 307 aaKnown RBP10.24□□□□□ -0.77
SP140-204ENST00000417495 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.24□□□□□ -0.77
SP140-204ENST00000417495 MAPK1P28482 360 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 PRPHP41219 470 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 ANKRD45Q5TZF3 282 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 USP44Q9H0E7 712 aa10.24□□□□□ -0.77
SP140-204ENST00000417495 V9GYY5 206 aaPredicted RBP10.24□□□□□ -0.77
SP140-204ENST00000417495 ATP9BO43861 1147 aa10.23□□□□□ -0.77
SP140-204ENST00000417495 TBX4P57082 545 aa10.23□□□□□ -0.77
SP140-204ENST00000417495 EVA1CP58658 441 aa10.23□□□□□ -0.77
SP140-204ENST00000417495 GIMAP7Q8NHV1 300 aa10.23□□□□□ -0.77
SP140-204ENST00000417495 LTV1Q96GA3 475 aaPredicted RBP10.23□□□□□ -0.77
SP140-204ENST00000417495 SNUPNO95149 360 aaKnown RBP10.23□□□□□ -0.77
SP140-204ENST00000417495 CCDC178Q5BJE1 867 aa10.23□□□□□ -0.77
SP140-204ENST00000417495 ARMC2Q8NEN0 867 aa10.23□□□□□ -0.77
SP140-204ENST00000417495 SETDB2Q96T68 719 aa10.23□□□□□ -0.77
SP140-204ENST00000417495 TRIM6Q9C030 488 aaPredicted RBP10.23□□□□□ -0.77
SP140-204ENST00000417495 PCDHGB7Q9Y5F8 929 aa10.23□□□□□ -0.77
SP140-204ENST00000417495 AFDNP55196 1824 aaKnown RBP10.22□□□□□ -0.77
SP140-204ENST00000417495 FANCCQ00597 558 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 ZNF790Q6PG37 636 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 MYLK4Q86YV6 388 aaPredicted RBP10.22□□□□□ -0.77
SP140-204ENST00000417495 USHBP1Q8N6Y0 703 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 LINS1Q8NG48 757 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 L3MBTL3Q96JM7 780 aaPredicted RBP10.22□□□□□ -0.77
SP140-204ENST00000417495 AKAP2Q9Y2D5 859 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 TJP1Q07157 1748 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 RDXP35241 583 aaKnown RBP10.22□□□□□ -0.77
SP140-204ENST00000417495 HHATQ5VTY9 493 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 C16orf87Q6PH81 154 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 LRP10Q7Z4F1 713 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 RNF214Q8ND24 703 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 SMCR8Q8TEV9 937 aaPredicted RBP10.22□□□□□ -0.77
SP140-204ENST00000417495 RBM33Q96EV2 1170 aaKnown RBP10.22□□□□□ -0.77
SP140-204ENST00000417495 PCDH12Q9NPG4 1184 aa10.22□□□□□ -0.77
SP140-204ENST00000417495 BAG4O95429 457 aaKnown RBP10.21□□□□□ -0.77
SP140-204ENST00000417495 P4HBP07237 508 aaKnown RBP10.21□□□□□ -0.77
SP140-204ENST00000417495 FLT3P36888 993 aa10.21□□□□□ -0.77
SP140-204ENST00000417495 SF3B2Q13435 895 aaKnown RBP10.21□□□□□ -0.77
SP140-204ENST00000417495 KLHL10Q6JEL2 608 aa10.21□□□□□ -0.77
SP140-204ENST00000417495 SKAP1Q86WV1 359 aa10.21□□□□□ -0.77
SP140-204ENST00000417495 ERC1Q8IUD2 1116 aa10.21□□□□□ -0.77
SP140-204ENST00000417495 PLEKHG4BQ96PX9 1271 aa10.21□□□□□ -0.77
SP140-204ENST00000417495 POLR3CQ9BUI4 534 aaPredicted RBP10.21□□□□□ -0.77
SP140-204ENST00000417495 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.21□□□□□ -0.77
SP140-204ENST00000417495 AK9Q5TCS8 1911 aa10.21□□□□□ -0.77
SP140-204ENST00000417495 ANKRD36CQ5JPF3 1778 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 IVLP07476 585 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 SNRPA1P09661 255 aaKnown RBP10.21□□□□□ -0.78
SP140-204ENST00000417495 UBTFL1P0CB47 393 aaPredicted RBP10.21□□□□□ -0.78
SP140-204ENST00000417495 GCFC2P16383 781 aaKnown RBP10.21□□□□□ -0.78
SP140-204ENST00000417495 CHMLP26374 656 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 TPM4P67936 248 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 CRYMQ14894 314 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 IQCF2Q8IXL9 164 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 ARHGEF10LQ9HCE6 1279 aa10.21□□□□□ -0.78
SP140-204ENST00000417495 GNL3LQ9NVN8 582 aaKnown RBP10.21□□□□□ -0.78
SP140-204ENST00000417495 CUEDC1Q9NWM3 386 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms