RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 OTOP1Q7RTM1 612 aa8.68□□□□□ -1.02
COPS3-202ENST00000417352 LPIN2Q92539 896 aa8.68□□□□□ -1.02
COPS3-202ENST00000417352 HOOK2Q96ED9 719 aa8.68□□□□□ -1.02
COPS3-202ENST00000417352 PTPN18Q99952 460 aa8.68□□□□□ -1.02
COPS3-202ENST00000417352 ZFYVE28Q9HCC9 887 aa8.68□□□□□ -1.02
COPS3-202ENST00000417352 HDAC5Q9UQL6 1122 aa8.68□□□□□ -1.02
COPS3-202ENST00000417352 UTYO14607 1347 aa8.68□□□□□ -1.02
COPS3-202ENST00000417352 SSC5DA1L4H1 1573 aa8.68□□□□□ -1.02
COPS3-202ENST00000417352 MYH13Q9UKX3 1938 aa8.68□□□□□ -1.02
COPS3-202ENST00000417352 UNCXA6NJT0 531 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 TNRC18O15417 2968 aaPredicted RBP8.67□□□□□ -1.02
COPS3-202ENST00000417352 LDHBP07195 334 aaKnown RBP8.67□□□□□ -1.02
COPS3-202ENST00000417352 DSG2Q14126 1118 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 ARHGEF6Q15052 776 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 ATP2B3Q16720 1220 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 SLC4A8Q2Y0W8 1093 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 ALDH1L2Q3SY69 923 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 GORABQ5T7V8 394 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 DCAF15Q66K64 600 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 ZSCAN29Q8IWY8 852 aaPredicted RBP8.67□□□□□ -1.02
COPS3-202ENST00000417352 WDR66Q8TBY9 1149 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 FRAT1Q92837 279 aaPredicted RBP8.67□□□□□ -1.02
COPS3-202ENST00000417352 ZNF521Q96K83 1311 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 ZDHHC15Q96MV8 337 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 TEPSINQ96N21 525 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 NEUROD6Q96NK8 337 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 USP40Q9NVE5 1235 aa8.67□□□□□ -1.02
COPS3-202ENST00000417352 LRRFIP2Q9Y608 721 aaKnown RBP8.67□□□□□ -1.02
COPS3-202ENST00000417352 CETPP11597 493 aa8.66□□□□□ -1.02
COPS3-202ENST00000417352 HDLBPQ00341 1268 aaKnown RBP8.66□□□□□ -1.02
COPS3-202ENST00000417352 DIXDC1Q155Q3 683 aa8.66□□□□□ -1.02
COPS3-202ENST00000417352 NOM1Q5C9Z4 860 aaKnown RBP8.66□□□□□ -1.02
COPS3-202ENST00000417352 NBPF11Q86T75 865 aa8.66□□□□□ -1.02
COPS3-202ENST00000417352 VGLL2Q8N8G2 317 aa8.66□□□□□ -1.02
COPS3-202ENST00000417352 API5Q9BZZ5 524 aaKnown RBP8.66□□□□□ -1.02
COPS3-202ENST00000417352 ABCF2Q9UG63 623 aa8.66□□□□□ -1.02
COPS3-202ENST00000417352 PA2G4Q9UQ80 394 aaKnown RBP8.66□□□□□ -1.02
COPS3-202ENST00000417352 PTPN22Q9Y2R2 807 aa8.66□□□□□ -1.02
COPS3-202ENST00000417352 OTOFQ9HC10 1997 aa8.66□□□□□ -1.02
COPS3-202ENST00000417352 TBC1D12O60347 775 aa8.65□□□□□ -1.02
COPS3-202ENST00000417352 TIMM10P62072 90 aa8.65□□□□□ -1.02
COPS3-202ENST00000417352 SNAPC2Q13487 334 aa8.65□□□□□ -1.02
COPS3-202ENST00000417352 SLC9C1Q4G0N8 1177 aa8.65□□□□□ -1.02
COPS3-202ENST00000417352 INTS3Q68E01 1043 aaKnown RBP8.65□□□□□ -1.02
COPS3-202ENST00000417352 APOBEC3HQ6NTF7 200 aaKnown RBP8.65□□□□□ -1.02
COPS3-202ENST00000417352 HHIPL2Q6UWX4 724 aa8.65□□□□□ -1.02
COPS3-202ENST00000417352 ERO1BQ86YB8 467 aa8.65□□□□□ -1.02
COPS3-202ENST00000417352 DZIP1Q86YF9 867 aaKnown RBP8.65□□□□□ -1.02
COPS3-202ENST00000417352 FAM43AQ8N2R8 423 aa8.65□□□□□ -1.02
COPS3-202ENST00000417352 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.65□□□□□ -1.02
COPS3-202ENST00000417352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.65□□□□□ -1.02
COPS3-202ENST00000417352 BRI3BPQ8WY22 251 aa8.65□□□□□ -1.02
COPS3-202ENST00000417352 CFHR5Q9BXR6 569 aa8.65□□□□□ -1.02
COPS3-202ENST00000417352 ZNF341Q9BYN7 854 aa8.65□□□□□ -1.02
COPS3-202ENST00000417352 ARAP2Q8WZ64 1704 aa8.65□□□□□ -1.03
COPS3-202ENST00000417352 TK2O00142 265 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 IRF6O14896 467 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 SRGAP3O43295 1099 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 FGFR2P21802 821 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 PRDX5P30044 214 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 INPP5BP32019 993 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 IL15P40933 162 aaPredicted RBP8.64□□□□□ -1.03
COPS3-202ENST00000417352 PHKA1P46020 1223 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 RFX5P48382 616 aaPredicted RBP8.64□□□□□ -1.03
COPS3-202ENST00000417352 PSEN2P49810 448 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 PICALMQ13492 652 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 DMRTA1Q5VZB9 504 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 CDC42EP5Q6NZY7 148 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 ATG9AQ7Z3C6 839 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 FAM83AQ86UY5 434 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 CLUAP1Q96AJ1 413 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 BIN2Q9UBW5 565 aaPredicted RBP8.64□□□□□ -1.03
COPS3-202ENST00000417352 DENND2AQ9ULE3 1009 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 SUGT1Q9Y2Z0 365 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 DAGLAQ9Y4D2 1042 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 SNCAIPQ9Y6H5 919 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 PDE4DIPQ5VU43 2346 aa8.64□□□□□ -1.03
COPS3-202ENST00000417352 TESPA1A2RU30 521 aaPredicted RBP8.63□□□□□ -1.03
COPS3-202ENST00000417352 SPDYE5A6NIY4 337 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 BTBD19C9JJ37 291 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 IPO8O15397 1037 aaKnown RBP8.63□□□□□ -1.03
COPS3-202ENST00000417352 CIAO1O76071 339 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
COPS3-202ENST00000417352 EN2P19622 333 aaPredicted RBP8.63□□□□□ -1.03
COPS3-202ENST00000417352 ADORA1P30542 326 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 TFCP2Q12800 502 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 NFIAQ12857 509 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 PRPF38BQ5VTL8 546 aaKnown RBP8.63□□□□□ -1.03
COPS3-202ENST00000417352 ZGPATQ8N5A5 531 aaKnown RBP8.63□□□□□ -1.03
COPS3-202ENST00000417352 FAM151AQ8WW52 585 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 MEIS3Q99687 375 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 MRIQ9BWK5 157 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 ARHGAP39Q9C0H5 1083 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 BCL11AQ9H165 835 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 PICK1Q9NRD5 415 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 CPA4Q9UI42 421 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 AKAP2Q9Y2D5 859 aa8.63□□□□□ -1.03
COPS3-202ENST00000417352 PTCH2Q9Y6C5 1203 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms