RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TBC1D9Q6ZT07 1266 aa31.13■■■□□ 2.57
VEGFA-208ENST00000417285 NSUN4Q96CB9 384 aaKnown RBP31.13■■■□□ 2.57
VEGFA-208ENST00000417285 RAI14Q9P0K7 980 aa31.13■■■□□ 2.57
VEGFA-208ENST00000417285 KCNH4Q9UQ05 1017 aa31.13■■■□□ 2.57
VEGFA-208ENST00000417285 FPGT-TNNI3KV9GXZ4 949 aa31.13■■■□□ 2.57
VEGFA-208ENST00000417285 TLR2O60603 784 aa31.12■■■□□ 2.57
VEGFA-208ENST00000417285 MS4A1P11836 297 aa31.12■■■□□ 2.57
VEGFA-208ENST00000417285 PI16Q6UXB8 463 aa31.12■■■□□ 2.57
VEGFA-208ENST00000417285 C1orf115Q9H7X2 142 aa31.12■■■□□ 2.57
VEGFA-208ENST00000417285 LRP2BPQ9P2M1 347 aa31.12■■■□□ 2.57
VEGFA-208ENST00000417285 PHF20L1A8MW92 1017 aa31.11■■■□□ 2.57
VEGFA-208ENST00000417285 MCAMP43121 646 aa31.11■■■□□ 2.57
VEGFA-208ENST00000417285 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.11■■■□□ 2.57
VEGFA-208ENST00000417285 ZNF384Q8TF68 577 aa31.11■■■□□ 2.57
VEGFA-208ENST00000417285 CXCL11O14625 94 aa31.1■■■□□ 2.57
VEGFA-208ENST00000417285 IGSF3O75054 1194 aa31.1■■■□□ 2.57
VEGFA-208ENST00000417285 RHBDL3P58872 404 aa31.1■■■□□ 2.57
VEGFA-208ENST00000417285 TTC39AQ5SRH9 613 aa31.1■■■□□ 2.57
VEGFA-208ENST00000417285 SH3BP5LQ7L8J4 393 aa31.1■■■□□ 2.57
VEGFA-208ENST00000417285 ANKRD23Q86SG2 305 aa31.1■■■□□ 2.57
VEGFA-208ENST00000417285 MYH2Q9UKX2 1941 aa31.1■■■□□ 2.57
VEGFA-208ENST00000417285 TNRC18O15417 2968 aaPredicted RBP31.09■■■□□ 2.57
VEGFA-208ENST00000417285 RFX7Q2KHR2 1363 aa31.09■■■□□ 2.57
VEGFA-208ENST00000417285 PICALMQ13492 652 aa31.09■■■□□ 2.57
VEGFA-208ENST00000417285 ZNF512BQ96KM6 892 aaPredicted RBP31.09■■■□□ 2.57
VEGFA-208ENST00000417285 DDX4Q9NQI0 724 aaKnown RBP31.09■■■□□ 2.57
VEGFA-208ENST00000417285 PICK1Q9NRD5 415 aa31.09■■■□□ 2.57
VEGFA-208ENST00000417285 ATRNL1Q5VV63 1379 aa31.08■■■□□ 2.57
VEGFA-208ENST00000417285 DDTLA6NHG4 134 aaPredicted RBP31.08■■■□□ 2.57
VEGFA-208ENST00000417285 KIF22Q14807 665 aa31.08■■■□□ 2.57
VEGFA-208ENST00000417285 SCYL3Q8IZE3 742 aa31.08■■■□□ 2.57
VEGFA-208ENST00000417285 AK9Q5TCS8 1911 aa31.08■■■□□ 2.57
VEGFA-208ENST00000417285 TBC1D12O60347 775 aa31.07■■■□□ 2.56
VEGFA-208ENST00000417285 CTNND1O60716 968 aaKnown RBP31.07■■■□□ 2.56
VEGFA-208ENST00000417285 DBNDD2Q9BQY9 259 aa31.07■■■□□ 2.56
VEGFA-208ENST00000417285 NOL10Q9BSC4 688 aaKnown RBP31.07■■■□□ 2.56
VEGFA-208ENST00000417285 PANK1Q8TE04 598 aa31.06■■■□□ 2.56
VEGFA-208ENST00000417285 PDHXO00330 501 aa31.05■■■□□ 2.56
VEGFA-208ENST00000417285 ZHX2Q9Y6X8 837 aa31.05■■■□□ 2.56
VEGFA-208ENST00000417285 BAG3O95817 575 aa31.04■■■□□ 2.56
VEGFA-208ENST00000417285 GNRH1P01148 92 aa31.04■■■□□ 2.56
VEGFA-208ENST00000417285 CEP85Q6P2H3 762 aa31.04■■■□□ 2.56
VEGFA-208ENST00000417285 FASTKD5Q7L8L6 764 aaKnown RBP31.04■■■□□ 2.56
VEGFA-208ENST00000417285 SNRKQ9NRH2 765 aa31.04■■■□□ 2.56
VEGFA-208ENST00000417285 PLCG2P16885 1265 aa31.03■■■□□ 2.56
VEGFA-208ENST00000417285 PTPRAP18433 802 aa31.03■■■□□ 2.56
VEGFA-208ENST00000417285 NAA16Q6N069 864 aaPredicted RBP31.03■■■□□ 2.56
VEGFA-208ENST00000417285 C17orf99Q6UX52 265 aa31.03■■■□□ 2.56
VEGFA-208ENST00000417285 ARMC5Q96C12 935 aa31.03■■■□□ 2.56
VEGFA-208ENST00000417285 HTTP42858 3142 aa31.03■■■□□ 2.56
VEGFA-208ENST00000417285 LACTBP83111 547 aaPredicted RBP31.02■■■□□ 2.56
VEGFA-208ENST00000417285 MOGSQ13724 837 aa31.02■■■□□ 2.56
VEGFA-208ENST00000417285 ERC1Q8IUD2 1116 aa31.02■■■□□ 2.56
VEGFA-208ENST00000417285 PDE4DIPQ5VU43 2346 aa31.01■■■□□ 2.55
VEGFA-208ENST00000417285 PPP4CP60510 307 aa31.01■■■□□ 2.55
VEGFA-208ENST00000417285 CAP1Q01518 475 aa31.01■■■□□ 2.55
VEGFA-208ENST00000417285 TEX11Q8IYF3 940 aa31.01■■■□□ 2.55
VEGFA-208ENST00000417285 AFG3L2Q9Y4W6 797 aa31.01■■■□□ 2.55
VEGFA-208ENST00000417285 CYP2E1P05181 493 aaPredicted RBP31■■■□□ 2.55
VEGFA-208ENST00000417285 HSP90AB4PQ58FF6 505 aa31■■■□□ 2.55
VEGFA-208ENST00000417285 NBPF11Q86T75 865 aa31■■■□□ 2.55
VEGFA-208ENST00000417285 OSBPL5Q9H0X9 879 aaPredicted RBP31■■■□□ 2.55
VEGFA-208ENST00000417285 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31■■■□□ 2.553e-7■■■■■ 34.2
VEGFA-208ENST00000417285 DBNLQ9UJU6 430 aaKnown RBP31■■■□□ 2.55
VEGFA-208ENST00000417285 PRMT2P55345 433 aa30.99■■■□□ 2.55
VEGFA-208ENST00000417285 EAF2Q96CJ1 260 aaPredicted RBP30.99■■■□□ 2.55
VEGFA-208ENST00000417285 CCDC8Q9H0W5 538 aaPredicted RBP30.99■■■□□ 2.55
VEGFA-208ENST00000417285 RCAN3Q9UKA8 241 aa30.99■■■□□ 2.55
VEGFA-208ENST00000417285 A0A0G2JLL6 359 aaPredicted RBP30.98■■■□□ 2.55
VEGFA-208ENST00000417285 GPAT2Q6NUI2 795 aa30.98■■■□□ 2.55
VEGFA-208ENST00000417285 PRRT2Q7Z6L0 340 aaPredicted RBP30.98■■■□□ 2.55
VEGFA-208ENST00000417285 PARK7Q99497 189 aaKnown RBP30.98■■■□□ 2.55
VEGFA-208ENST00000417285 DHX36Q9H2U1 1008 aaKnown RBP30.98■■■□□ 2.55
VEGFA-208ENST00000417285 COL2A1P02458 1487 aaPredicted RBP30.97■■■□□ 2.55
VEGFA-208ENST00000417285 ZAP70P43403 619 aa30.97■■■□□ 2.55
VEGFA-208ENST00000417285 SH3RF3Q8TEJ3 882 aaPredicted RBP30.97■■■□□ 2.55
VEGFA-208ENST00000417285 CHMP4BQ9H444 224 aaKnown RBP30.96■■■□□ 2.55
VEGFA-208ENST00000417285 AATFQ9NY61 560 aaKnown RBP eCLIP30.96■■■□□ 2.55
VEGFA-208ENST00000417285 PI4KBQ9UBF8 816 aa30.96■■■□□ 2.55
VEGFA-208ENST00000417285 CPA4Q9UI42 421 aa30.96■■■□□ 2.55
VEGFA-208ENST00000417285 HERC5Q9UII4 1024 aaKnown RBP30.96■■■□□ 2.55
VEGFA-208ENST00000417285 SLC45A1Q9Y2W3 748 aa30.96■■■□□ 2.55
VEGFA-208ENST00000417285 SLC9C1Q4G0N8 1177 aa30.95■■■□□ 2.55
VEGFA-208ENST00000417285 TMED8Q6PL24 325 aaPredicted RBP30.95■■■□□ 2.55
VEGFA-208ENST00000417285 RPAP2Q8IXW5 612 aaPredicted RBP30.95■■■□□ 2.55
VEGFA-208ENST00000417285 DDX19BQ9UMR2 479 aa30.95■■■□□ 2.55
VEGFA-208ENST00000417285 PTCH2Q9Y6C5 1203 aa30.95■■■□□ 2.55
VEGFA-208ENST00000417285 SLURP2P0DP57 97 aa30.94■■■□□ 2.54
VEGFA-208ENST00000417285 HOXD10P28358 340 aa30.94■■■□□ 2.54
VEGFA-208ENST00000417285 TMEM106CQ9BVX2 250 aa30.94■■■□□ 2.54
VEGFA-208ENST00000417285 TBC1D2Q9BYX2 928 aa30.94■■■□□ 2.54
VEGFA-208ENST00000417285 ARHGAP39Q9C0H5 1083 aa30.94■■■□□ 2.54
VEGFA-208ENST00000417285 EXOC6BQ9Y2D4 811 aa30.94■■■□□ 2.54
VEGFA-208ENST00000417285 ADGRA2Q96PE1 1338 aa30.94■■■□□ 2.54
VEGFA-208ENST00000417285 PIH1D3Q9NQM4 214 aaKnown RBP30.93■■■□□ 2.54
VEGFA-208ENST00000417285 TLR7Q9NYK1 1049 aaKnown RBP30.93■■■□□ 2.54
VEGFA-208ENST00000417285 DOCK2Q92608 1830 aa30.92■■■□□ 2.54
VEGFA-208ENST00000417285 PSMC4P43686 418 aa30.92■■■□□ 2.54
VEGFA-208ENST00000417285 GADL1Q6ZQY3 521 aa30.92■■■□□ 2.54
VEGFA-208ENST00000417285 CERS3Q8IU89 383 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms