RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 DUOX1Q9NRD9 1551 aa12.54□□□□□ -0.4
SMPD4P1-201ENST00000416717 F8W031 263 aaPredicted RBP12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 H3BQV1 296 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 GUCY1B3Q02153 619 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 DNM1Q05193 864 aaKnown RBP12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 SKOR2Q2VWA4 1001 aaPredicted RBP12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 FBXL16Q8N461 479 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 MXD3Q9BW11 206 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 DCP1AQ9NPI6 582 aaPredicted RBP12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 WDR19Q8NEZ3 1342 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 CDK5RAP2Q96SN8 1893 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 KIAA1551Q9HCM1 1747 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 FIBPO43427 364 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 USP5P45974 858 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 EVCP57679 992 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 SMARCC2Q8TAQ2 1214 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 TMEM87BQ96K49 555 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 LLPHQ9BRT6 129 aaKnown RBP12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 LY9Q9HBG7 655 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 MCM9Q9NXL9 1143 aa12.53□□□□□ -0.4
SMPD4P1-201ENST00000416717 QSER1Q2KHR3 1735 aa12.52□□□□□ -0.4
SMPD4P1-201ENST00000416717 CPLX1O14810 134 aa12.52□□□□□ -0.41
SMPD4P1-201ENST00000416717 RANBP6O60518 1105 aaKnown RBP12.52□□□□□ -0.41
SMPD4P1-201ENST00000416717 USP17L8P0C7I0 530 aa12.52□□□□□ -0.41
SMPD4P1-201ENST00000416717 GSTO1P78417 241 aa12.52□□□□□ -0.41
SMPD4P1-201ENST00000416717 APOA5Q6Q788 366 aa12.52□□□□□ -0.41
SMPD4P1-201ENST00000416717 USP48Q86UV5 1035 aa12.52□□□□□ -0.41
SMPD4P1-201ENST00000416717 GPT2Q8TD30 523 aa12.52□□□□□ -0.41
SMPD4P1-201ENST00000416717 NOL10Q9BSC4 688 aaKnown RBP12.52□□□□□ -0.41
SMPD4P1-201ENST00000416717 RNF41Q9H4P4 317 aaPredicted RBP12.52□□□□□ -0.41
SMPD4P1-201ENST00000416717 LAMB1P07942 1786 aa12.52□□□□□ -0.41
SMPD4P1-201ENST00000416717 GADD45BO75293 160 aaPredicted RBP12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 ADD1P35611 737 aaKnown RBP12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 METAP2P50579 478 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 CAVIN1Q6NZI2 390 aaKnown RBP12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 TGFBRAP1Q8WUH2 860 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 DBNDD1Q9H9R9 158 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 CCDC69A6NI79 296 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 BTDP43251 543 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 KLHL40Q2TBA0 621 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 COA1Q9GZY4 146 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 KCNQ5Q9NR82 932 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 ATP8A2Q9NTI2 1148 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 RBM27Q9P2N5 1060 aaKnown RBP12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 SAP30BPQ9UHR5 308 aaKnown RBP12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 ANAPC4Q9UJX5 808 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 ATP6V1DQ9Y5K8 247 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 MROH7-TTC4A0A0A0MT08 1334 aa12.51□□□□□ -0.41
SMPD4P1-201ENST00000416717 ZBTB43O43298 467 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 BAG3O95817 575 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 LDHCP07864 332 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 FDPSP14324 419 aaKnown RBP12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 CDC27P30260 824 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 WTAPQ15007 396 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 STYK1Q6J9G0 422 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 MAPKAPK5Q8IW41 473 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 ESR2Q92731 530 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 UBAC1Q9BSL1 405 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 RTFDC1Q9BY42 306 aaPredicted RBP12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 NAV1Q8NEY1 1877 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 ERICH2A1L162 156 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 SART3Q15020 963 aaKnown RBP12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 FAM47AQ5JRC9 791 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 OTUD7BQ6GQQ9 843 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 GIMAP6Q6P9H5 292 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 GJB4Q9NTQ9 266 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 TFIP11Q9UBB9 837 aaKnown RBP12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
SMPD4P1-201ENST00000416717 GOLGA8AA7E2F4 631 aa12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 CERS5Q8N5B7 392 aa12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 TBC1D22AQ8WUA7 517 aa12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 PHKBQ93100 1093 aa12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 ORC3Q9UBD5 711 aaPredicted RBP12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 ADAMTSL1Q8N6G6 1762 aa12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 MYH1P12882 1939 aa12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 ZBTB22O15209 634 aa12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 SCNN1DP51172 638 aa12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 NUP133Q8WUM0 1156 aa12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 DYNLL2Q96FJ2 89 aa12.49□□□□□ -0.41
SMPD4P1-201ENST00000416717 TNKSO95271 1327 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 FAM205AQ6ZU69 1335 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 SCN9AQ15858 1988 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 C21orf2O43822 256 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 NMT2O60551 498 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 LIFRP42702 1097 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 SYNE3Q6ZMZ3 975 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 TEX11Q8IYF3 940 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 CMTR1Q8N1G2 835 aaKnown RBP12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 CCDC82Q8N4S0 544 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 CNKSR1Q969H4 720 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 EYA3Q99504 573 aa12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 ARPP21Q9UBL0 812 aaPredicted RBP12.48□□□□□ -0.41
SMPD4P1-201ENST00000416717 KIF3AQ9Y496 699 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms