RNA–Protein interactions for RNA: ENST00000414773.5

CLGN-202, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 2,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-202ENST00000414773 TGFBRAP1Q8WUH2 860 aa12.92□□□□□ -0.34
CLGN-202ENST00000414773 KRT23Q9C075 422 aa12.92□□□□□ -0.34
CLGN-202ENST00000414773 MCM9Q9NXL9 1143 aa12.92□□□□□ -0.34
CLGN-202ENST00000414773 USP17L8P0C7I0 530 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 SCNN1DP51172 638 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
CLGN-202ENST00000414773 PIM2Q9P1W9 311 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 BRPF3Q9ULD4 1205 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 WDR19Q8NEZ3 1342 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 PFKFB2O60825 505 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 PDIA3P30101 505 aaKnown RBP12.91□□□□□ -0.34
CLGN-202ENST00000414773 RAB11FIP4Q86YS3 637 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
CLGN-202ENST00000414773 SUGT1Q9Y2Z0 365 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 DAGLAQ9Y4D2 1042 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 GAKO14976 1311 aa12.91□□□□□ -0.34
CLGN-202ENST00000414773 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.34
CLGN-202ENST00000414773 PRDM1O75626 825 aa12.9□□□□□ -0.34
CLGN-202ENST00000414773 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.34
CLGN-202ENST00000414773 ZNF274Q96GC6 653 aaPredicted RBP12.9□□□□□ -0.34
CLGN-202ENST00000414773 ZKSCAN3Q9BRR0 538 aa12.9□□□□□ -0.34
CLGN-202ENST00000414773 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
CLGN-202ENST00000414773 NCOA5Q9HCD5 579 aaKnown RBP12.9□□□□□ -0.34
CLGN-202ENST00000414773 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.34
CLGN-202ENST00000414773 ANGEL1Q9UNK9 670 aaKnown RBP12.9□□□□□ -0.34
CLGN-202ENST00000414773 SCN9AQ15858 1988 aa12.9□□□□□ -0.34
CLGN-202ENST00000414773 SH2B2O14492 632 aaPredicted RBP12.9□□□□□ -0.34
CLGN-202ENST00000414773 STRIP1Q5VSL9 837 aa12.9□□□□□ -0.34
CLGN-202ENST00000414773 TEX11Q8IYF3 940 aa12.9□□□□□ -0.34
CLGN-202ENST00000414773 SGIP1Q9BQI5 828 aa12.9□□□□□ -0.34
CLGN-202ENST00000414773 ZNF277Q9NRM2 450 aaPredicted RBP12.9□□□□□ -0.34
CLGN-202ENST00000414773 ARPP21Q9UBL0 812 aaPredicted RBP12.9□□□□□ -0.34
CLGN-202ENST00000414773 JAK2O60674 1132 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 BRD1O95696 1058 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 MCM4P33991 863 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 RHBDL3P58872 404 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 DACT2Q5SW24 774 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 KIAA0825Q8IV33 1275 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 IGDCC4Q8TDY8 1250 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 TMEM87BQ96K49 555 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 USP17L3A6NCW0 530 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 USP17L4A6NCW7 530 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 YDJCA8MPS7 323 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 IFIT3O14879 490 aaKnown RBP12.89□□□□□ -0.35
CLGN-202ENST00000414773 SYT1P21579 422 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 EVCP57679 992 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 SBK1Q52WX2 424 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 TMEM67Q5HYA8 995 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 USP17L1Q7RTZ2 530 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 PSMD1Q99460 953 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 SAP30BPQ9UHR5 308 aaKnown RBP12.89□□□□□ -0.35
CLGN-202ENST00000414773 GOLGA8BA8MQT2 603 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 DALRD3Q5D0E6 543 aaKnown RBP12.89□□□□□ -0.35
CLGN-202ENST00000414773 GBP4Q96PP9 640 aa12.89□□□□□ -0.35
CLGN-202ENST00000414773 PPFIA3O75145 1194 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 PLCG2P16885 1265 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 PTGER2P43116 358 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 CERS3Q8IU89 383 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 LARGE2Q8N3Y3 721 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 ESR2Q92731 530 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 LY9Q9HBG7 655 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 STX6O43752 255 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 RANBP6O60518 1105 aaKnown RBP12.88□□□□□ -0.35
CLGN-202ENST00000414773 C12orf60Q5U649 245 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 NFXL1Q6ZNB6 911 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 CHAMP1Q96JM3 812 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 HPS5Q9UPZ3 1129 aa12.88□□□□□ -0.35
CLGN-202ENST00000414773 LAMB1P07942 1786 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 ADAMTSL1Q8N6G6 1762 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 FLT1P17948 1338 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
CLGN-202ENST00000414773 BAG4O95429 457 aaKnown RBP12.87□□□□□ -0.35
CLGN-202ENST00000414773 CTDNEP1O95476 244 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 RXRAP19793 462 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 NSUN7Q8NE18 718 aaKnown RBP12.87□□□□□ -0.35
CLGN-202ENST00000414773 TEKT1Q969V4 418 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 POLR3DP05423 398 aaPredicted RBP12.87□□□□□ -0.35
CLGN-202ENST00000414773 SLC3A2P08195 630 aaKnown RBP12.87□□□□□ -0.35
CLGN-202ENST00000414773 FGRP09769 529 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 CRKP46108 304 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 DYNLL2Q96FJ2 89 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLGN-202ENST00000414773 PCDHAC2Q9Y5I4 1007 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 NAV1Q8NEY1 1877 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 CDK5RAP2Q96SN8 1893 aa12.87□□□□□ -0.35
CLGN-202ENST00000414773 PLCD1P51178 756 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 FKBP1AP62942 108 aaKnown RBP12.86□□□□□ -0.35
CLGN-202ENST00000414773 PICALMQ13492 652 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 SART3Q15020 963 aaKnown RBP12.86□□□□□ -0.35
CLGN-202ENST00000414773 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
CLGN-202ENST00000414773 SOGA3Q5TF21 947 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
CLGN-202ENST00000414773 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
CLGN-202ENST00000414773 AMOTL1Q8IY63 956 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 UBAC1Q9BSL1 405 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 MYL10Q9BUA6 226 aa12.86□□□□□ -0.35
CLGN-202ENST00000414773 CD2APQ9Y5K6 639 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms