RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PRDM6Q9NQX0 595 aa4.87□□□□□ -1.63
LINC01048-201ENST00000414480 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC01048-201ENST00000414480 THRAP3Q9Y2W1 955 aaKnown RBP4.87□□□□□ -1.63
LINC01048-201ENST00000414480 NOP58Q9Y2X3 529 aaKnown RBP4.87□□□□□ -1.63
LINC01048-201ENST00000414480 COMMD10Q9Y6G5 202 aa4.87□□□□□ -1.63
LINC01048-201ENST00000414480 RPS6KL1Q9Y6S9 549 aa4.87□□□□□ -1.63
LINC01048-201ENST00000414480 IVNS1ABPQ9Y6Y0 642 aa4.87□□□□□ -1.63
LINC01048-201ENST00000414480 VPS8Q8N3P4 1428 aa4.87□□□□□ -1.63
LINC01048-201ENST00000414480 WDR90Q96KV7 1748 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 BTBD11A6QL63 1104 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 ADARB2-AS1A8MUL3 147 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 SIN3BO75182 1162 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 TOMM70O94826 608 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 SCP2P22307 547 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 TRIM28Q13263 835 aaKnown RBP4.86□□□□□ -1.63
LINC01048-201ENST00000414480 LRP8Q14114 963 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 TSGA10IPQ3SY00 556 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 GIMAP6Q6P9H5 292 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 SYT9Q86SS6 491 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 ZNF295-AS1Q8N0V1 137 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 PDILTQ8N807 584 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 MARCH10Q8NA82 808 aaPredicted RBP4.86□□□□□ -1.63
LINC01048-201ENST00000414480 PMFBP1Q8TBY8 1022 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 RBM28Q9NW13 759 aaKnown RBP4.86□□□□□ -1.63
LINC01048-201ENST00000414480 ISY1Q9ULR0 285 aaKnown RBP4.86□□□□□ -1.63
LINC01048-201ENST00000414480 NUP155O75694 1391 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 LMO7Q8WWI1 1683 aa4.86□□□□□ -1.63
LINC01048-201ENST00000414480 FAM229AH3BQW9 127 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 M0R082 166 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 H2AFB1P0C5Y9 115 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 H2AFB2P0C5Z0 115 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 HSPA1AP0DMV8 641 aaKnown RBP4.85□□□□□ -1.63
LINC01048-201ENST00000414480 HSPA1BP0DMV9 641 aaKnown RBP4.85□□□□□ -1.63
LINC01048-201ENST00000414480 TCF3P15923 654 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 IBSPP21815 317 aaPredicted RBP4.85□□□□□ -1.63
LINC01048-201ENST00000414480 COPB2P35606 906 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 RHBDL3P58872 404 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 MTFR1Q15390 333 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 CCAR1Q8IX12 1150 aaKnown RBP4.85□□□□□ -1.63
LINC01048-201ENST00000414480 ZNF417Q8TAU3 575 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 PMM1Q92871 262 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 ZNF587Q96SQ5 575 aaPredicted RBP4.85□□□□□ -1.63
LINC01048-201ENST00000414480 STK26Q9P289 416 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 GABBR1Q9UBS5 961 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 PRDM4Q9UKN5 801 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 TPX2Q9ULW0 747 aaKnown RBP4.85□□□□□ -1.63
LINC01048-201ENST00000414480 ADGRF5Q8IZF2 1346 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 PRR36Q9H6K5 1346 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 LRRC37A3O60309 1634 aa4.85□□□□□ -1.63
LINC01048-201ENST00000414480 ANKARQ7Z5J8 1434 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 RPGRIP1LQ68CZ1 1315 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 PNPLA7Q6ZV29 1317 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 CENPJQ9HC77 1338 aaPredicted RBP4.84□□□□□ -1.63
LINC01048-201ENST00000414480 CCDC194A0A1B0GVG4 234 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 VGLL3A8MV65 326 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 CDK2AP1O14519 115 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 EIF3JO75822 258 aaKnown RBP4.84□□□□□ -1.63
LINC01048-201ENST00000414480 ZC3H6P61129 1189 aaKnown RBP4.84□□□□□ -1.63
LINC01048-201ENST00000414480 SF3A1Q15459 793 aaKnown RBP4.84□□□□□ -1.63
LINC01048-201ENST00000414480 TMEM132EQ6IEE7 984 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 BICDL1Q6ZP65 573 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 TNFRSF25Q93038 417 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 SLC4A9Q96Q91 983 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 JADE2Q9NQC1 790 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 CABP1Q9NZU7 370 aa4.84□□□□□ -1.63
LINC01048-201ENST00000414480 FBXO9Q9UK97 447 aaPredicted RBP4.84□□□□□ -1.63
LINC01048-201ENST00000414480 IQSEC3Q9UPP2 1182 aaPredicted RBP4.84□□□□□ -1.63
LINC01048-201ENST00000414480 KNDC1Q76NI1 1749 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 IFT172Q9UG01 1749 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 COL5A2P05997 1499 aaPredicted RBP4.83□□□□□ -1.64
LINC01048-201ENST00000414480 CPDO75976 1380 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 A6NJY4 79 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 C9orf172C9J069 976 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 EXOC5O00471 708 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 ALBP02768 609 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 EVA1CP58658 441 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 COL9A3Q14050 684 aaPredicted RBP4.83□□□□□ -1.64
LINC01048-201ENST00000414480 MAP7D1Q3KQU3 841 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 CLEC4GQ6UXB4 293 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 SND1Q7KZF4 910 aaKnown RBP eCLIP4.83□□□□□ -1.64
LINC01048-201ENST00000414480 DDX46Q7L014 1031 aaKnown RBP4.83□□□□□ -1.64
LINC01048-201ENST00000414480 RPAINQ86UA6 219 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 AMOTL1Q8IY63 956 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 MICALL1Q8N3F8 863 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 ATL2Q8NHH9 583 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 MYCBPQ99417 103 aaPredicted RBP4.83□□□□□ -1.64
LINC01048-201ENST00000414480 NMRK2Q9NPI5 230 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 IGSF5Q9NSI5 407 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 RAI14Q9P0K7 980 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 SERTAD1Q9UHV2 236 aa4.83□□□□□ -1.64
LINC01048-201ENST00000414480 CTDP1Q9Y5B0 961 aaPredicted RBP4.83□□□□□ -1.64
LINC01048-201ENST00000414480 ARHGEF28Q8N1W1 1705 aaKnown RBP4.83□□□□□ -1.64
LINC01048-201ENST00000414480 TULP4Q9NRJ4 1543 aa4.82□□□□□ -1.64
LINC01048-201ENST00000414480 YTHDC2Q9H6S0 1430 aaKnown RBP4.82□□□□□ -1.64
LINC01048-201ENST00000414480 GPRASP1Q5JY77 1395 aa4.82□□□□□ -1.64
LINC01048-201ENST00000414480 TMEM229AB2RXF0 380 aa4.82□□□□□ -1.64
LINC01048-201ENST00000414480 U2SURPO15042 1029 aaKnown RBP4.82□□□□□ -1.64
LINC01048-201ENST00000414480 NID1P14543 1247 aa4.82□□□□□ -1.64
LINC01048-201ENST00000414480 RGS19P49795 217 aa4.82□□□□□ -1.64
LINC01048-201ENST00000414480 MAP2K1Q02750 393 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms