RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CCDC184Q52MB2 194 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 NLRP13Q86W25 1043 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 ATCAYQ86WG3 371 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 FAM20CQ8IXL6 584 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 NLGN1Q8N2Q7 840 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 OR13H1Q8NG92 308 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 GPR152Q8TDT2 470 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 GIPC2Q8TF65 315 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 PLD4Q96BZ4 506 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 IFT122Q9HBG6 1241 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 SPC25Q9HBM1 224 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 GEMIN8Q9NWZ8 242 aaKnown RBP4.5□□□□□ -1.69
SF3B1-203ENST00000414174 PIM2Q9P1W9 311 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 STIM2Q9P246 746 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 CCDC39Q9UFE4 941 aa4.5□□□□□ -1.69
SF3B1-203ENST00000414174 ANGEL1Q9UNK9 670 aaKnown RBP4.5□□□□□ -1.69
SF3B1-203ENST00000414174 UBAP1LF5GYI3 381 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 TM4SF5O14894 197 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 TIMM44O43615 452 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 CYP2E1P05181 493 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-203ENST00000414174 COL6A1P12109 1028 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 CD53P19397 219 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 HOXA10P31260 410 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-203ENST00000414174 ATP11AP98196 1134 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 SLC20A2Q08357 652 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 PHLDB3Q6NSJ2 640 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 CCDC174Q6PII3 467 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 DRC7Q8IY82 874 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 PDILTQ8N807 584 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 ENOX1Q8TC92 643 aaKnown RBP4.49□□□□□ -1.69
SF3B1-203ENST00000414174 ZNF512BQ96KM6 892 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-203ENST00000414174 MYCBPQ99417 103 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-203ENST00000414174 NAP1L4Q99733 375 aaKnown RBP4.49□□□□□ -1.69
SF3B1-203ENST00000414174 CWC25Q9NXE8 425 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-203ENST00000414174 PUF60Q9UHX1 559 aaKnown RBP4.49□□□□□ -1.69
SF3B1-203ENST00000414174 TRIM33Q9UPN9 1127 aa4.49□□□□□ -1.69
SF3B1-203ENST00000414174 WDR64B1ANS9 1081 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 PRC1O43663 620 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 PSAPP07602 524 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 VIL1P09327 827 aaKnown RBP4.48□□□□□ -1.69
SF3B1-203ENST00000414174 CD68P34810 354 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-203ENST00000414174 TDO2P48775 406 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 POU5F1BQ06416 359 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 MTMR3Q13615 1198 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 TCEAL1Q15170 157 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 CPSF6Q16630 551 aaKnown RBP eCLIP4.48□□□□□ -1.69
SF3B1-203ENST00000414174 MSMPQ1L6U9 139 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 CCDC144BQ3MJ40 725 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 GDF6Q6KF10 455 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-203ENST00000414174 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 BEND4Q6ZU67 534 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 NT5DC4Q86YG4 428 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 GALNT11Q8NCW6 608 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 GIMAP7Q8NHV1 300 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 IL17RAQ96F46 866 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 RBM28Q9NW13 759 aaKnown RBP4.48□□□□□ -1.69
SF3B1-203ENST00000414174 COL4A3BPQ9Y5P4 624 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 MRVI1Q9Y6F6 885 aa4.48□□□□□ -1.69
SF3B1-203ENST00000414174 A6NHS1 94 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 PPP1R12AO14974 1030 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-203ENST00000414174 FGAP02671 866 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 ACPPP15309 386 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 FOSL1P15407 271 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 ERCC5P28715 1186 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-203ENST00000414174 SATB1Q01826 763 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 UBE4AQ14139 1066 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 DHX8Q14562 1220 aaKnown RBP4.47□□□□□ -1.69
SF3B1-203ENST00000414174 COL19A1Q14993 1142 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 MAPRE1Q15691 268 aaKnown RBP4.47□□□□□ -1.69
SF3B1-203ENST00000414174 KIAA1211Q6ZU35 1233 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 RPUSD2Q8IZ73 545 aaKnown RBP4.47□□□□□ -1.69
SF3B1-203ENST00000414174 TTC30BQ8N4P2 665 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 HELQQ8TDG4 1101 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 CDC5LQ99459 802 aaKnown RBP4.47□□□□□ -1.69
SF3B1-203ENST00000414174 RETREG1Q9H6L5 497 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 TMEM63CQ9P1W3 806 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 SFMBT1Q9UHJ3 866 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 SMC3Q9UQE7 1217 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 AKAP2Q9Y2D5 859 aa4.47□□□□□ -1.69
SF3B1-203ENST00000414174 CTDP1Q9Y5B0 961 aaPredicted RBP4.47□□□□□ -1.69
SF3B1-203ENST00000414174 WISP1O95388 367 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 GHRHP01286 108 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 S100BP04271 92 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-203ENST00000414174 BMP3P12645 472 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 MPSTP25325 297 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 FLT3P36888 993 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 RGS3P49796 1198 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 RGL3Q3MIN7 710 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 ZNF648Q5T619 568 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-203ENST00000414174 RNF187Q5TA31 235 aaPredicted RBP4.46□□□□□ -1.7
SF3B1-203ENST00000414174 NFXL1Q6ZNB6 911 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 ACAD11Q709F0 780 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 VSIG10LQ86VR7 867 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 ZSCAN30Q86W11 494 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 ANKRD13BQ86YJ7 626 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 TP53INP2Q8IXH6 220 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 PIK3R5Q8WYR1 880 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 RSPH1Q8WYR4 309 aa4.46□□□□□ -1.7
SF3B1-203ENST00000414174 ITFG2Q969R8 447 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms