RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 PARK7Q99497 189 aaKnown RBP20.57■□□□□ 0.88
SF1-207ENST00000413951 PCDH10Q9P2E7 1040 aa20.57■□□□□ 0.88
SF1-207ENST00000413951 POTEFA5A3E0 1075 aa20.56■□□□□ 0.88
SF1-207ENST00000413951 PDHXO00330 501 aa20.56■□□□□ 0.88
SF1-207ENST00000413951 LDHCP07864 332 aa20.56■□□□□ 0.88
SF1-207ENST00000413951 ADORA1P30542 326 aa20.56■□□□□ 0.88
SF1-207ENST00000413951 RGS3P49796 1198 aa20.56■□□□□ 0.88
SF1-207ENST00000413951 G3BP1Q13283 466 aaKnown RBP eCLIP20.56■□□□□ 0.88
SF1-207ENST00000413951 FASTKD5Q7L8L6 764 aaKnown RBP20.56■□□□□ 0.88
SF1-207ENST00000413951 NEUROD6Q96NK8 337 aa20.56■□□□□ 0.88
SF1-207ENST00000413951 DDX19BQ9UMR2 479 aa20.56■□□□□ 0.88
SF1-207ENST00000413951 COG6Q9Y2V7 657 aa20.56■□□□□ 0.88
SF1-207ENST00000413951 PTCH2Q9Y6C5 1203 aa20.56■□□□□ 0.88
SF1-207ENST00000413951 TFCP2Q12800 502 aa20.55■□□□□ 0.88
SF1-207ENST00000413951 SLC4A8Q2Y0W8 1093 aa20.55■□□□□ 0.88
SF1-207ENST00000413951 C17orf99Q6UX52 265 aa20.55■□□□□ 0.88
SF1-207ENST00000413951 SCYL3Q8IZE3 742 aa20.55■□□□□ 0.88
SF1-207ENST00000413951 NPM3O75607 178 aaKnown RBP20.54■□□□□ 0.88
SF1-207ENST00000413951 MROH7-TTC4A0A0A0MT08 1334 aa20.53■□□□□ 0.88
SF1-207ENST00000413951 CTNND1O60716 968 aaKnown RBP20.53■□□□□ 0.88
SF1-207ENST00000413951 UQCRFS1P1P0C7P4 283 aa20.53■□□□□ 0.88
SF1-207ENST00000413951 BTDP43251 543 aa20.53■□□□□ 0.88
SF1-207ENST00000413951 MAP3K10Q02779 954 aa20.53■□□□□ 0.88
SF1-207ENST00000413951 ZBTB40Q9NUA8 1239 aa20.53■□□□□ 0.88
SF1-207ENST00000413951 SUPT16HQ9Y5B9 1047 aaKnown RBP20.53■□□□□ 0.88
SF1-207ENST00000413951 GPR75-ASB3A0A0A6YYF3 556 aa20.52■□□□□ 0.88
SF1-207ENST00000413951 IGSF3O75054 1194 aa20.52■□□□□ 0.88
SF1-207ENST00000413951 SPATA5Q8NB90 893 aa20.52■□□□□ 0.88
SF1-207ENST00000413951 SLC45A1Q9Y2W3 748 aa20.52■□□□□ 0.88
SF1-207ENST00000413951 ZHX2Q9Y6X8 837 aa20.52■□□□□ 0.88
SF1-207ENST00000413951 PHF20L1A8MW92 1017 aa20.51■□□□□ 0.87
SF1-207ENST00000413951 TBC1D12O60347 775 aa20.51■□□□□ 0.87
SF1-207ENST00000413951 FMNL1O95466 1100 aaPredicted RBP20.51■□□□□ 0.87
SF1-207ENST00000413951 EN2P19622 333 aaPredicted RBP20.51■□□□□ 0.87
SF1-207ENST00000413951 PSMC4P43686 418 aa20.51■□□□□ 0.87
SF1-207ENST00000413951 CAP1Q01518 475 aa20.51■□□□□ 0.87
SF1-207ENST00000413951 MECOMQ03112 1051 aa20.51■□□□□ 0.87
SF1-207ENST00000413951 ZFPM1Q8IX07 1006 aa20.51■□□□□ 0.87
SF1-207ENST00000413951 NOL10Q9BSC4 688 aaKnown RBP20.51■□□□□ 0.87
SF1-207ENST00000413951 SRRDQ9UH36 339 aa20.51■□□□□ 0.87
SF1-207ENST00000413951 CPA4Q9UI42 421 aa20.51■□□□□ 0.87
SF1-207ENST00000413951 RBBP6Q7Z6E9 1792 aaKnown RBP20.5■□□□□ 0.87
SF1-207ENST00000413951 PTPRAP18433 802 aa20.5■□□□□ 0.87
SF1-207ENST00000413951 PICALMQ13492 652 aa20.5■□□□□ 0.87
SF1-207ENST00000413951 RAET1EQ8TD07 263 aa20.5■□□□□ 0.87
SF1-207ENST00000413951 TBC1D2Q9BYX2 928 aa20.5■□□□□ 0.87
SF1-207ENST00000413951 CHMP4BQ9H444 224 aaKnown RBP20.5■□□□□ 0.87
SF1-207ENST00000413951 HMG20BQ9P0W2 317 aa20.5■□□□□ 0.87
SF1-207ENST00000413951 AK9Q5TCS8 1911 aa20.5■□□□□ 0.87
SF1-207ENST00000413951 RFX7Q2KHR2 1363 aa20.49■□□□□ 0.87
SF1-207ENST00000413951 ATRNL1Q5VV63 1379 aa20.49■□□□□ 0.87
SF1-207ENST00000413951 A0A0G2JLL6 359 aaPredicted RBP20.49■□□□□ 0.87
SF1-207ENST00000413951 ARID4AP29374 1257 aaPredicted RBP20.49■□□□□ 0.87
SF1-207ENST00000413951 FCGRTP55899 365 aa20.49■□□□□ 0.87
SF1-207ENST00000413951 PRRT2Q7Z6L0 340 aaPredicted RBP20.49■□□□□ 0.87
SF1-207ENST00000413951 NKX2-3Q8TAU0 364 aa20.49■□□□□ 0.87
SF1-207ENST00000413951 ARHGAP39Q9C0H5 1083 aa20.49■□□□□ 0.87
SF1-207ENST00000413951 GPR108Q9NPR9 543 aa20.49■□□□□ 0.87
SF1-207ENST00000413951 RAI14Q9P0K7 980 aa20.49■□□□□ 0.87
SF1-207ENST00000413951 AFG3L2Q9Y4W6 797 aa20.49■□□□□ 0.87
SF1-207ENST00000413951 CCDC158Q5M9N0 1113 aa20.48■□□□□ 0.87
SF1-207ENST00000413951 TRIM47Q96LD4 638 aa20.48■□□□□ 0.87
SF1-207ENST00000413951 LRP2BPQ9P2M1 347 aa20.48■□□□□ 0.87
SF1-207ENST00000413951 ADGRA2Q96PE1 1338 aa20.48■□□□□ 0.87
SF1-207ENST00000413951 DDTLA6NHG4 134 aaPredicted RBP20.47■□□□□ 0.87
SF1-207ENST00000413951 BAG3O95817 575 aa20.47■□□□□ 0.87
SF1-207ENST00000413951 PLCG2P16885 1265 aa20.47■□□□□ 0.87
SF1-207ENST00000413951 MOGSQ13724 837 aa20.47■□□□□ 0.87
SF1-207ENST00000413951 SH3TC2Q8TF17 1288 aa20.47■□□□□ 0.87
SF1-207ENST00000413951 NSUN4Q96CB9 384 aaKnown RBP20.47■□□□□ 0.87
SF1-207ENST00000413951 OSBPL5Q9H0X9 879 aaPredicted RBP20.47■□□□□ 0.87
SF1-207ENST00000413951 PNMA3Q9UL41 463 aa20.47■□□□□ 0.87
SF1-207ENST00000413951 HTTP42858 3142 aa20.47■□□□□ 0.87
SF1-207ENST00000413951 MYH2Q9UKX2 1941 aa20.47■□□□□ 0.87
SF1-207ENST00000413951 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
SF1-207ENST00000413951 CAPN2P17655 700 aa20.46■□□□□ 0.87
SF1-207ENST00000413951 OSBPP22059 807 aa20.46■□□□□ 0.87
SF1-207ENST00000413951 RHBDL3P58872 404 aa20.46■□□□□ 0.87
SF1-207ENST00000413951 UBXN2AP68543 259 aa20.46■□□□□ 0.87
SF1-207ENST00000413951 OS9Q13438 667 aaPredicted RBP20.46■□□□□ 0.87
SF1-207ENST00000413951 GPAT2Q6NUI2 795 aa20.46■□□□□ 0.87
SF1-207ENST00000413951 GADL1Q6ZQY3 521 aa20.46■□□□□ 0.87
SF1-207ENST00000413951 SH3BP5LQ7L8J4 393 aa20.46■□□□□ 0.87
SF1-207ENST00000413951 SMCR8Q8TEV9 937 aaPredicted RBP20.46■□□□□ 0.87
SF1-207ENST00000413951 C1orf115Q9H7X2 142 aa20.46■□□□□ 0.87
SF1-207ENST00000413951 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.46■□□□□ 0.87
SF1-207ENST00000413951 DDX4Q9NQI0 724 aaKnown RBP20.46■□□□□ 0.87
SF1-207ENST00000413951 MYPNQ86TC9 1320 aa20.46■□□□□ 0.87
SF1-207ENST00000413951 COL2A1P02458 1487 aaPredicted RBP20.45■□□□□ 0.86
SF1-207ENST00000413951 PNMA6EA0A0J9YXQ4 647 aa20.45■□□□□ 0.86
SF1-207ENST00000413951 BCRP11274 1271 aa20.45■□□□□ 0.86
SF1-207ENST00000413951 GRK4P32298 578 aa20.45■□□□□ 0.86
SF1-207ENST00000413951 PABPC4Q13310 644 aaKnown RBP eCLIP20.45■□□□□ 0.86
SF1-207ENST00000413951 TTC39AQ5SRH9 613 aa20.45■□□□□ 0.86
SF1-207ENST00000413951 CRBNQ96SW2 442 aa20.45■□□□□ 0.86
SF1-207ENST00000413951 DHX36Q9H2U1 1008 aaKnown RBP20.45■□□□□ 0.86
SF1-207ENST00000413951 DOCK2Q92608 1830 aa20.44■□□□□ 0.86
SF1-207ENST00000413951 CYP2C8P10632 490 aa20.44■□□□□ 0.86
SF1-207ENST00000413951 POLA2Q14181 598 aa20.44■□□□□ 0.86
SF1-207ENST00000413951 CEP85Q6P2H3 762 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms