RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 WRNIP1Q96S55 665 aa22.98■■□□□ 1.27
TRIM56-202ENST00000412507 NOL10Q9BSC4 688 aaKnown RBP22.98■■□□□ 1.27
TRIM56-202ENST00000412507 ZNF341Q9BYN7 854 aa22.98■■□□□ 1.27
TRIM56-202ENST00000412507 SAGE1Q9NXZ1 904 aa22.98■■□□□ 1.27
TRIM56-202ENST00000412507 CSADQ9Y600 493 aa22.98■■□□□ 1.27
TRIM56-202ENST00000412507 SIPA1L1O43166 1804 aa22.97■■□□□ 1.27
TRIM56-202ENST00000412507 SREBF2Q12772 1141 aa22.97■■□□□ 1.27
TRIM56-202ENST00000412507 SH3BP5LQ7L8J4 393 aa22.97■■□□□ 1.27
TRIM56-202ENST00000412507 ZSCAN29Q8IWY8 852 aaPredicted RBP22.97■■□□□ 1.27
TRIM56-202ENST00000412507 ZKSCAN4Q969J2 545 aaPredicted RBP22.97■■□□□ 1.27
TRIM56-202ENST00000412507 OPTNQ96CV9 577 aa22.97■■□□□ 1.27
TRIM56-202ENST00000412507 AATFQ9NY61 560 aaKnown RBP eCLIP22.97■■□□□ 1.27
TRIM56-202ENST00000412507 DOCK1Q14185 1865 aa22.96■■□□□ 1.27
TRIM56-202ENST00000412507 DDTLA6NHG4 134 aaPredicted RBP22.96■■□□□ 1.27
TRIM56-202ENST00000412507 MAP4K4O95819 1239 aaPredicted RBP22.96■■□□□ 1.27
TRIM56-202ENST00000412507 TEX11Q8IYF3 940 aa22.96■■□□□ 1.27
TRIM56-202ENST00000412507 TNS4Q8IZW8 715 aa22.96■■□□□ 1.27
TRIM56-202ENST00000412507 SH3RF3Q8TEJ3 882 aaPredicted RBP22.96■■□□□ 1.27
TRIM56-202ENST00000412507 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.96■■□□□ 1.27
TRIM56-202ENST00000412507 CNKSR2Q8WXI2 1034 aa22.96■■□□□ 1.27
TRIM56-202ENST00000412507 MANSC4A6NHS7 340 aaPredicted RBP22.95■■□□□ 1.26
TRIM56-202ENST00000412507 IGSF3O75054 1194 aa22.95■■□□□ 1.26
TRIM56-202ENST00000412507 BAG3O95817 575 aa22.95■■□□□ 1.26
TRIM56-202ENST00000412507 CYP7A1P22680 504 aa22.95■■□□□ 1.26
TRIM56-202ENST00000412507 SNCAIPQ9Y6H5 919 aa22.95■■□□□ 1.26
TRIM56-202ENST00000412507 ATRNL1Q5VV63 1379 aa22.94■■□□□ 1.26
TRIM56-202ENST00000412507 INPP5BP32019 993 aa22.94■■□□□ 1.26
TRIM56-202ENST00000412507 MAGEB6Q8N7X4 407 aa22.94■■□□□ 1.26
TRIM56-202ENST00000412507 DNAJC2Q99543 621 aaKnown RBP22.94■■□□□ 1.26
TRIM56-202ENST00000412507 ZNF112Q9UJU3 913 aa22.94■■□□□ 1.26
TRIM56-202ENST00000412507 PHIPQ8WWQ0 1821 aa22.94■■□□□ 1.26
TRIM56-202ENST00000412507 NPM3O75607 178 aaKnown RBP22.93■■□□□ 1.26
TRIM56-202ENST00000412507 PPP4CP60510 307 aa22.93■■□□□ 1.26
TRIM56-202ENST00000412507 MAP3K12Q12852 859 aa22.93■■□□□ 1.26
TRIM56-202ENST00000412507 OTUD5Q96G74 571 aa22.93■■□□□ 1.26
TRIM56-202ENST00000412507 BOLA2Q9H3K6 86 aa22.93■■□□□ 1.26
TRIM56-202ENST00000412507 PTPRFP10586 1907 aa22.92■■□□□ 1.26
TRIM56-202ENST00000412507 GOLIM4O00461 696 aa22.92■■□□□ 1.26
TRIM56-202ENST00000412507 SLURP2P0DP57 97 aa22.92■■□□□ 1.26
TRIM56-202ENST00000412507 PLCG2P16885 1265 aa22.92■■□□□ 1.26
TRIM56-202ENST00000412507 INHBEP58166 350 aa22.92■■□□□ 1.26
TRIM56-202ENST00000412507 DYNLL1P63167 89 aaKnown RBP22.92■■□□□ 1.26
TRIM56-202ENST00000412507 TTF1Q15361 905 aaPredicted RBP22.92■■□□□ 1.26
TRIM56-202ENST00000412507 OSBPL5Q9H0X9 879 aaPredicted RBP22.92■■□□□ 1.26
TRIM56-202ENST00000412507 SPDYE5A6NIY4 337 aa22.91■■□□□ 1.26
TRIM56-202ENST00000412507 TBC1D8O95759 1140 aa22.91■■□□□ 1.26
TRIM56-202ENST00000412507 ATP5JP18859 108 aa22.91■■□□□ 1.26
TRIM56-202ENST00000412507 MIGA1Q8NAN2 632 aa22.91■■□□□ 1.26
TRIM56-202ENST00000412507 EDC3Q96F86 508 aaKnown RBP22.91■■□□□ 1.26
TRIM56-202ENST00000412507 NAV1Q8NEY1 1877 aa22.91■■□□□ 1.26
TRIM56-202ENST00000412507 COL2A1P02458 1487 aaPredicted RBP22.91■■□□□ 1.26
TRIM56-202ENST00000412507 ERO1BQ86YB8 467 aa22.9■■□□□ 1.26
TRIM56-202ENST00000412507 IFNL1Q8IU54 200 aa22.9■■□□□ 1.26
TRIM56-202ENST00000412507 TGFBRAP1Q8WUH2 860 aa22.9■■□□□ 1.26
TRIM56-202ENST00000412507 IGF2BP3O00425 579 aaKnown RBP eCLIP22.89■■□□□ 1.25
TRIM56-202ENST00000412507 MAP3K10Q02779 954 aa22.89■■□□□ 1.25
TRIM56-202ENST00000412507 MAPKAPK5Q8IW41 473 aa22.89■■□□□ 1.25
TRIM56-202ENST00000412507 PAG1Q9NWQ8 432 aa22.89■■□□□ 1.25
TRIM56-202ENST00000412507 BAZ2AQ9UIF9 1905 aaKnown RBP22.88■■□□□ 1.25
TRIM56-202ENST00000412507 PHF20L1A8MW92 1017 aa22.88■■□□□ 1.25
TRIM56-202ENST00000412507 MS4A4AQ96JQ5 239 aa22.88■■□□□ 1.25
TRIM56-202ENST00000412507 HAUS7Q99871 368 aa22.88■■□□□ 1.25
TRIM56-202ENST00000412507 SUPT16HQ9Y5B9 1047 aaKnown RBP22.88■■□□□ 1.25
TRIM56-202ENST00000412507 TESPA1A2RU30 521 aaPredicted RBP22.87■■□□□ 1.25
TRIM56-202ENST00000412507 FAM196BA6NMK8 535 aa22.87■■□□□ 1.25
TRIM56-202ENST00000412507 ALDH1A1P00352 501 aa22.87■■□□□ 1.25
TRIM56-202ENST00000412507 PDE6AP16499 860 aa22.87■■□□□ 1.25
TRIM56-202ENST00000412507 GTF2A2P52657 109 aa22.87■■□□□ 1.25
TRIM56-202ENST00000412507 PPIL2Q13356 520 aa22.87■■□□□ 1.25
TRIM56-202ENST00000412507 NOL9Q5SY16 702 aaKnown RBP22.87■■□□□ 1.25
TRIM56-202ENST00000412507 SLC9C2Q5TAH2 1124 aa22.87■■□□□ 1.25
TRIM56-202ENST00000412507 IFFO2Q5TF58 517 aa22.87■■□□□ 1.25
TRIM56-202ENST00000412507 TMED8Q6PL24 325 aaPredicted RBP22.87■■□□□ 1.25
TRIM56-202ENST00000412507 PTPN18Q99952 460 aa22.87■■□□□ 1.25
TRIM56-202ENST00000412507 MYH8P13535 1937 aa22.86■■□□□ 1.25
TRIM56-202ENST00000412507 FLT1P17948 1338 aa22.86■■□□□ 1.25
TRIM56-202ENST00000412507 CCL15-CCL14A0A0B4J2E2 113 aa22.86■■□□□ 1.25
TRIM56-202ENST00000412507 IRF6O14896 467 aa22.86■■□□□ 1.25
TRIM56-202ENST00000412507 PPATQ06203 517 aa22.86■■□□□ 1.25
TRIM56-202ENST00000412507 CCL15Q16663 113 aa22.86■■□□□ 1.25
TRIM56-202ENST00000412507 BRI3BPQ8WY22 251 aa22.86■■□□□ 1.25
TRIM56-202ENST00000412507 R3HDMLQ9H3Y0 253 aa22.86■■□□□ 1.25
TRIM56-202ENST00000412507 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.86■■□□□ 1.259e-13■■■■□ 20.3
TRIM56-202ENST00000412507 ECHDC1Q9NTX5 307 aa22.86■■□□□ 1.25
TRIM56-202ENST00000412507 DDX60LQ5H9U9 1706 aaKnown RBP22.85■■□□□ 1.25
TRIM56-202ENST00000412507 ZNF532Q9HCE3 1301 aa22.85■■□□□ 1.25
TRIM56-202ENST00000412507 TBC1D12O60347 775 aa22.85■■□□□ 1.25
TRIM56-202ENST00000412507 OTUD7BQ6GQQ9 843 aa22.85■■□□□ 1.25
TRIM56-202ENST00000412507 EXOC6Q8TAG9 804 aa22.85■■□□□ 1.25
TRIM56-202ENST00000412507 CFHR5Q9BXR6 569 aa22.85■■□□□ 1.25
TRIM56-202ENST00000412507 TSHZ3Q63HK5 1081 aa22.84■■□□□ 1.25
TRIM56-202ENST00000412507 CERS3Q8IU89 383 aa22.84■■□□□ 1.25
TRIM56-202ENST00000412507 SCYL3Q8IZE3 742 aa22.84■■□□□ 1.25
TRIM56-202ENST00000412507 SAP30BPQ9UHR5 308 aaKnown RBP22.84■■□□□ 1.25
TRIM56-202ENST00000412507 MAGEB6P1A0A0J9YX57 407 aa22.83■■□□□ 1.25
TRIM56-202ENST00000412507 TCRBV5S4A2TA0A5A2 114 aa22.83■■□□□ 1.25
TRIM56-202ENST00000412507 USP5P45974 858 aa22.83■■□□□ 1.25
TRIM56-202ENST00000412507 SNAPC2Q13487 334 aa22.83■■□□□ 1.25
TRIM56-202ENST00000412507 HDAC1Q13547 482 aaPredicted RBP22.83■■□□□ 1.25
TRIM56-202ENST00000412507 AAMPQ13685 434 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms