RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 PLEKHM2Q8IWE5 1019 aa28.85■■■□□ 2.21
UBE2E3-202ENST00000410062 ZSCAN29Q8IWY8 852 aaPredicted RBP28.85■■■□□ 2.21
UBE2E3-202ENST00000410062 TGFBRAP1Q8WUH2 860 aa28.85■■■□□ 2.21
UBE2E3-202ENST00000410062 CAPNS2Q96L46 248 aa28.85■■■□□ 2.21
UBE2E3-202ENST00000410062 CDK5RAP2Q96SN8 1893 aa28.85■■■□□ 2.21
UBE2E3-202ENST00000410062 SH3BP5LQ7L8J4 393 aa28.84■■■□□ 2.21
UBE2E3-202ENST00000410062 MAGEB6P1A0A0J9YX57 407 aa28.84■■■□□ 2.21
UBE2E3-202ENST00000410062 ZSCAN25Q6NSZ9 544 aa28.84■■■□□ 2.21
UBE2E3-202ENST00000410062 MIGA2Q7L4E1 593 aa28.84■■■□□ 2.21
UBE2E3-202ENST00000410062 RIOK1Q9BRS2 568 aaKnown RBP28.84■■■□□ 2.21
UBE2E3-202ENST00000410062 WDR33Q9C0J8 1336 aaKnown RBP28.83■■■□□ 2.21
UBE2E3-202ENST00000410062 DDTLA6NHG4 134 aaPredicted RBP28.83■■■□□ 2.21
UBE2E3-202ENST00000410062 NPM3O75607 178 aaKnown RBP28.83■■■□□ 2.21
UBE2E3-202ENST00000410062 ZNF157P51786 506 aaPredicted RBP28.83■■■□□ 2.21
UBE2E3-202ENST00000410062 MAP3K11Q16584 847 aa28.83■■■□□ 2.21
UBE2E3-202ENST00000410062 MAPKAPK5Q8IW41 473 aa28.83■■■□□ 2.21
UBE2E3-202ENST00000410062 UBE3CQ15386 1083 aa28.82■■■□□ 2.2
UBE2E3-202ENST00000410062 CSRNP1Q96S65 589 aa28.82■■■□□ 2.2
UBE2E3-202ENST00000410062 OSBPL5Q9H0X9 879 aaPredicted RBP28.82■■■□□ 2.2
UBE2E3-202ENST00000410062 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.82■■■□□ 2.2
UBE2E3-202ENST00000410062 FOCADQ5VW36 1801 aa28.82■■■□□ 2.2
UBE2E3-202ENST00000410062 PDE4AP27815 886 aa28.81■■■□□ 2.2
UBE2E3-202ENST00000410062 ECE1P42892 770 aa28.81■■■□□ 2.2
UBE2E3-202ENST00000410062 IREB2P48200 963 aaKnown RBP28.81■■■□□ 2.2
UBE2E3-202ENST00000410062 LDLRAD1Q5T700 205 aa28.81■■■□□ 2.2
UBE2E3-202ENST00000410062 CERS3Q8IU89 383 aa28.81■■■□□ 2.2
UBE2E3-202ENST00000410062 HOOK2Q96ED9 719 aa28.81■■■□□ 2.2
UBE2E3-202ENST00000410062 FLT1P17948 1338 aa28.81■■■□□ 2.2
UBE2E3-202ENST00000410062 FSD1Q9BTV5 496 aa28.8■■■□□ 2.2
UBE2E3-202ENST00000410062 LCORLQ8N3X6 602 aa28.79■■■□□ 2.2
UBE2E3-202ENST00000410062 OSBPL3Q9H4L5 887 aa28.79■■■□□ 2.2
UBE2E3-202ENST00000410062 USP5P45974 858 aa28.79■■■□□ 2.2
UBE2E3-202ENST00000410062 DCAF15Q66K64 600 aa28.79■■■□□ 2.2
UBE2E3-202ENST00000410062 CLMNQ96JQ2 1002 aa28.79■■■□□ 2.2
UBE2E3-202ENST00000410062 ARMT1Q9H993 441 aa28.79■■■□□ 2.2
UBE2E3-202ENST00000410062 ATRNL1Q5VV63 1379 aa28.78■■■□□ 2.2
UBE2E3-202ENST00000410062 OTOFQ9HC10 1997 aa28.78■■■□□ 2.2
UBE2E3-202ENST00000410062 RNF113AO15541 343 aaKnown RBP28.78■■■□□ 2.2
UBE2E3-202ENST00000410062 AOC2O75106 756 aa28.78■■■□□ 2.2
UBE2E3-202ENST00000410062 MBD4O95243 580 aa28.78■■■□□ 2.2
UBE2E3-202ENST00000410062 SLURP2P0DP57 97 aa28.78■■■□□ 2.2
UBE2E3-202ENST00000410062 PUS7LQ9H0K6 701 aaKnown RBP28.78■■■□□ 2.2
UBE2E3-202ENST00000410062 FAM155AB1AL88 458 aaPredicted RBP28.77■■■□□ 2.2
UBE2E3-202ENST00000410062 RASAL3Q86YV0 1011 aa28.77■■■□□ 2.2
UBE2E3-202ENST00000410062 EVI5LQ96CN4 794 aa28.77■■■□□ 2.2
UBE2E3-202ENST00000410062 SAP30BPQ9UHR5 308 aaKnown RBP28.77■■■□□ 2.2
UBE2E3-202ENST00000410062 SLC10A3P09131 477 aa28.76■■■□□ 2.19
UBE2E3-202ENST00000410062 ANKRD13AQ8IZ07 590 aa28.76■■■□□ 2.19
UBE2E3-202ENST00000410062 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.76■■■□□ 2.19
UBE2E3-202ENST00000410062 CCDC102AQ96A19 550 aa28.76■■■□□ 2.19
UBE2E3-202ENST00000410062 ZNF341Q9BYN7 854 aa28.76■■■□□ 2.19
UBE2E3-202ENST00000410062 COL2A1P02458 1487 aaPredicted RBP28.76■■■□□ 2.19
UBE2E3-202ENST00000410062 ZFYP08048 801 aaPredicted RBP28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 CENPQQ7L2Z9 268 aaPredicted RBP28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 JMYQ8N9B5 988 aa28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 CCDC136Q96JN2 1154 aa28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 WRNIP1Q96S55 665 aa28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 CRNKL1Q9BZJ0 848 aaKnown RBP28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 PALD1Q9ULE6 856 aa28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 TRIM6-TRIM34B2RNG4 842 aa28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 MAP3K9P80192 1104 aa28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 LRRFIP1Q32MZ4 808 aaKnown RBP28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 APPBP2Q92624 585 aa28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 OSBP2Q969R2 916 aa28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 SLC10A4Q96EP9 437 aa28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 ZIC5Q96T25 663 aa28.75■■■□□ 2.19
UBE2E3-202ENST00000410062 SLC4A8Q2Y0W8 1093 aa28.74■■■□□ 2.19
UBE2E3-202ENST00000410062 SDR42E1Q8WUS8 393 aa28.74■■■□□ 2.19
UBE2E3-202ENST00000410062 AIDAQ96BJ3 306 aa28.74■■■□□ 2.19
UBE2E3-202ENST00000410062 VGLL4Q14135 290 aa28.73■■■□□ 2.19
UBE2E3-202ENST00000410062 RILPL2Q969X0 211 aa28.73■■■□□ 2.19
UBE2E3-202ENST00000410062 DHX36Q9H2U1 1008 aaKnown RBP28.73■■■□□ 2.19
UBE2E3-202ENST00000410062 MYH1P12882 1939 aa28.73■■■□□ 2.19
UBE2E3-202ENST00000410062 UNCXA6NJT0 531 aa28.72■■■□□ 2.19
UBE2E3-202ENST00000410062 FAM196BA6NMK8 535 aa28.72■■■□□ 2.19
UBE2E3-202ENST00000410062 PRKAB2O43741 272 aa28.72■■■□□ 2.19
UBE2E3-202ENST00000410062 MKRN3Q13064 507 aaKnown RBP28.72■■■□□ 2.19
UBE2E3-202ENST00000410062 NOGQ13253 232 aa28.72■■■□□ 2.19
UBE2E3-202ENST00000410062 ZKSCAN4Q969J2 545 aaPredicted RBP28.72■■■□□ 2.19
UBE2E3-202ENST00000410062 ELP3Q9H9T3 547 aa28.72■■■□□ 2.19
UBE2E3-202ENST00000410062 INPP5BP32019 993 aa28.71■■■□□ 2.19
UBE2E3-202ENST00000410062 CSADQ9Y600 493 aa28.71■■■□□ 2.19
UBE2E3-202ENST00000410062 THSD7BQ9C0I4 1608 aa28.71■■■□□ 2.19
UBE2E3-202ENST00000410062 SIPA1L1O43166 1804 aa28.71■■■□□ 2.19
UBE2E3-202ENST00000410062 MAP3K10Q02779 954 aa28.71■■■□□ 2.19
UBE2E3-202ENST00000410062 SEC62Q99442 399 aaKnown RBP28.71■■■□□ 2.19
UBE2E3-202ENST00000410062 PI4KBQ9UBF8 816 aa28.71■■■□□ 2.19
UBE2E3-202ENST00000410062 ZNF112Q9UJU3 913 aa28.71■■■□□ 2.19
UBE2E3-202ENST00000410062 NAV1Q8NEY1 1877 aa28.7■■■□□ 2.19
UBE2E3-202ENST00000410062 M0R2C6 588 aa28.7■■■□□ 2.18
UBE2E3-202ENST00000410062 MAP2K2P36507 400 aa28.7■■■□□ 2.18
UBE2E3-202ENST00000410062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.7■■■□□ 2.18
UBE2E3-202ENST00000410062 PHF20L1A8MW92 1017 aa28.69■■■□□ 2.18
UBE2E3-202ENST00000410062 STRBPQ96SI9 672 aaKnown RBP28.69■■■□□ 2.18
UBE2E3-202ENST00000410062 DCP1AQ9NPI6 582 aaPredicted RBP28.69■■■□□ 2.18
UBE2E3-202ENST00000410062 SLC4A4Q9Y6R1 1079 aa28.69■■■□□ 2.18
UBE2E3-202ENST00000410062 TBC1D12O60347 775 aa28.68■■■□□ 2.18
UBE2E3-202ENST00000410062 KIF23Q02241 960 aaPredicted RBP28.68■■■□□ 2.18
UBE2E3-202ENST00000410062 ZMYM1Q5SVZ6 1142 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms