RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 LRP5O75197 1615 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 ANKRD36CQ5JPF3 1778 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 GOLGA8AA7E2F4 631 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 RANBP6O60518 1105 aaKnown RBP19.23■□□□□ 0.67
LIMS2-208ENST00000410011 KIF20AO95235 890 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 LMOD1P29536 600 aaPredicted RBP19.23■□□□□ 0.67
LIMS2-208ENST00000410011 TMEM67Q5HYA8 995 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 KRT23Q9C075 422 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 FAM53CQ9NYF3 392 aa19.23■□□□□ 0.67
LIMS2-208ENST00000410011 PHKA1P46020 1223 aa19.22■□□□□ 0.67
LIMS2-208ENST00000410011 UBASH3AP57075 661 aa19.22■□□□□ 0.67
LIMS2-208ENST00000410011 SSRP1Q08945 709 aaKnown RBP19.22■□□□□ 0.67
LIMS2-208ENST00000410011 OLFM4Q6UX06 510 aa19.22■□□□□ 0.67
LIMS2-208ENST00000410011 IFNL3Q8IZI9 196 aa19.22■□□□□ 0.67
LIMS2-208ENST00000410011 PHKBQ93100 1093 aa19.22■□□□□ 0.67
LIMS2-208ENST00000410011 HOOK1Q9UJC3 728 aaKnown RBP19.22■□□□□ 0.67
LIMS2-208ENST00000410011 KCNH3Q9ULD8 1083 aa19.22■□□□□ 0.67
LIMS2-208ENST00000410011 CYP19A1P11511 503 aaPredicted RBP19.22■□□□□ 0.67
LIMS2-208ENST00000410011 MDM2Q00987 491 aaPredicted RBP19.22■□□□□ 0.67
LIMS2-208ENST00000410011 MICU3Q86XE3 530 aa19.22■□□□□ 0.67
LIMS2-208ENST00000410011 KRI1Q8N9T8 703 aaKnown RBP19.22■□□□□ 0.67
LIMS2-208ENST00000410011 ZSWIM5Q9P217 1185 aa19.22■□□□□ 0.67
LIMS2-208ENST00000410011 WWC3Q9ULE0 1092 aa19.22■□□□□ 0.67
LIMS2-208ENST00000410011 SLC12A7Q9Y666 1083 aa19.22■□□□□ 0.67
LIMS2-208ENST00000410011 ARAP2Q8WZ64 1704 aa19.21■□□□□ 0.67
LIMS2-208ENST00000410011 EVA1CP58658 441 aa19.21■□□□□ 0.67
LIMS2-208ENST00000410011 GABPB1Q06547 395 aaPredicted RBP19.21■□□□□ 0.67
LIMS2-208ENST00000410011 NT5DC1Q5TFE4 455 aa19.21■□□□□ 0.67
LIMS2-208ENST00000410011 NFXL1Q6ZNB6 911 aa19.21■□□□□ 0.67
LIMS2-208ENST00000410011 METTL16Q86W50 562 aaKnown RBP19.21■□□□□ 0.67
LIMS2-208ENST00000410011 NOSTRINQ8IVI9 506 aa19.21■□□□□ 0.67
LIMS2-208ENST00000410011 VSTM4Q8IW00 320 aa19.21■□□□□ 0.67
LIMS2-208ENST00000410011 SENP2Q9HC62 589 aa19.21■□□□□ 0.67
LIMS2-208ENST00000410011 TIAM2Q8IVF5 1701 aa19.21■□□□□ 0.67
LIMS2-208ENST00000410011 XIRP1Q702N8 1843 aaKnown RBP19.21■□□□□ 0.67
LIMS2-208ENST00000410011 ATP1A3P13637 1013 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 GNAT2P19087 354 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 MAP3K12Q12852 859 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 KMT5BQ4FZB7 885 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 ZNF579Q8NAF0 562 aaKnown RBP19.2■□□□□ 0.66
LIMS2-208ENST00000410011 ABCA3Q99758 1704 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 FOXP1Q9H334 677 aaPredicted RBP19.2■□□□□ 0.66
LIMS2-208ENST00000410011 TRMT112Q9UI30 125 aaKnown RBP19.2■□□□□ 0.66
LIMS2-208ENST00000410011 PHLPP2Q6ZVD8 1323 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 ETF1P62495 437 aaKnown RBP19.2■□□□□ 0.66
LIMS2-208ENST00000410011 PNOCQ13519 176 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 LONRF3Q496Y0 759 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 AKNAD1Q5T1N1 836 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 FOXP4Q8IVH2 680 aaPredicted RBP19.2■□□□□ 0.66
LIMS2-208ENST00000410011 TMTC2Q8N394 836 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 SPATA5Q8NB90 893 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 CNNM3Q8NE01 707 aa19.2■□□□□ 0.66
LIMS2-208ENST00000410011 MMP1P03956 469 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 GPTP24298 496 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 RILPL1Q5EBL4 403 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 NAPBQ9H115 298 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 EPB41L4AQ9HCS5 686 aaPredicted RBP19.19■□□□□ 0.66
LIMS2-208ENST00000410011 IFIT3O14879 490 aaKnown RBP19.19■□□□□ 0.66
LIMS2-208ENST00000410011 SERPINC1P01008 464 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 RXRAP19793 462 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 PTPREP23469 700 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 SAFBQ15424 915 aaKnown RBP eCLIP19.19■□□□□ 0.66
LIMS2-208ENST00000410011 ZNF34Q8IZ26 560 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 STAG1Q8WVM7 1258 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 PCDHA5Q9Y5H7 936 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 PNPLA7Q6ZV29 1317 aa19.19■□□□□ 0.66
LIMS2-208ENST00000410011 ECM29Q5VYK3 1845 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 DOCK2Q92608 1830 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 CLIC6Q96NY7 704 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 STRN4Q9NRL3 753 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 MYO5AQ9Y4I1 1855 aaKnown RBP19.18■□□□□ 0.66
LIMS2-208ENST00000410011 BCL9O00512 1426 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 CCDC196A0A1B0GTZ2 297 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 SLC5A1P13866 664 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 IL6STP40189 918 aaPredicted RBP19.18■□□□□ 0.66
LIMS2-208ENST00000410011 SARSP49591 514 aaKnown RBP19.18■□□□□ 0.66
LIMS2-208ENST00000410011 SYT10Q6XYQ8 523 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 STK11IPQ8N1F8 1099 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 TRIML1Q8N9V2 468 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 SRRTQ9BXP5 876 aaKnown RBP19.18■□□□□ 0.66
LIMS2-208ENST00000410011 SLC26A6Q9BXS9 759 aa19.18■□□□□ 0.66
LIMS2-208ENST00000410011 GSG1L2A8MUP6 293 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 PPP2R5BQ15173 497 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 CT47A1Q5JQC4 288 aaPredicted RBP19.17■□□□□ 0.66
LIMS2-208ENST00000410011 MFSD6Q6ZSS7 791 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 TRIM22Q8IYM9 498 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 MLKLQ8NB16 471 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 DACH1Q9UI36 760 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 H2AFXP16104 143 aaPredicted RBP19.17■□□□□ 0.66
LIMS2-208ENST00000410011 SART3Q15020 963 aaKnown RBP19.17■□□□□ 0.66
LIMS2-208ENST00000410011 ELF2Q15723 593 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 CFAP100Q494V2 611 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 ISM2Q6H9L7 571 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 KANK3Q6NY19 840 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 DPF2Q92785 391 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 SLAIN2Q9P270 581 aa19.17■□□□□ 0.66
LIMS2-208ENST00000410011 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.17■□□□□ 0.66
LIMS2-208ENST00000410011 DEXIO95424 95 aa19.16■□□□□ 0.66
LIMS2-208ENST00000410011 TOP1P11387 765 aaKnown RBP19.16■□□□□ 0.66
LIMS2-208ENST00000410011 TOB1P50616 345 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms