RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 OLA1Q9NTK5 396 aaKnown RBP9.43□□□□□ -0.9
SCN9A-203ENST00000409672 PPIP5K1Q6PFW1 1433 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 CTAGE5O15320 804 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 A1BGP04217 495 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 ABI1Q8IZP0 508 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 CMTR1Q8N1G2 835 aaKnown RBP9.43□□□□□ -0.9
SCN9A-203ENST00000409672 CCDC110Q8TBZ0 833 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 TRIM31Q9BZY9 425 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 ATP2A1O14983 1001 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 CAPN15O75808 1086 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 ITIH3Q06033 890 aa9.43□□□□□ -0.9
SCN9A-203ENST00000409672 METTL14Q9HCE5 456 aaKnown RBP9.43□□□□□ -0.9
SCN9A-203ENST00000409672 CYLC1P35663 651 aaPredicted RBP9.42□□□□□ -0.9
SCN9A-203ENST00000409672 EEPD1Q7L9B9 569 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 MYL10Q9BUA6 226 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 PPP2R5AQ15172 486 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 PSMB7Q99436 277 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 MOSPD1Q9UJG1 213 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 ALAS1P13196 640 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 TNNI1P19237 187 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 SMC6Q96SB8 1091 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
SCN9A-203ENST00000409672 SLC1A4P43007 532 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 MICALL1Q8N3F8 863 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 TRAF1Q13077 416 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 LONRF3Q496Y0 759 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 CDAN1Q8IWY9 1227 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 RABEP2Q9H5N1 569 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 SH2D4AQ9H788 454 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 TACC3Q9Y6A5 838 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 PALM3A6NDB9 673 aaPredicted RBP9.42□□□□□ -0.9
SCN9A-203ENST00000409672 CAPN9O14815 690 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 NR1I2O75469 434 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 RHOXF2BP0C7M4 288 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 RNASELQ05823 741 aaKnown RBP9.42□□□□□ -0.9
SCN9A-203ENST00000409672 RNF217Q8TC41 542 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 RHOXF2Q9BQY4 288 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 TTF2Q9UNY4 1162 aaKnown RBP9.42□□□□□ -0.9
SCN9A-203ENST00000409672 STK24Q9Y6E0 443 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 ESYT2A0FGR8 921 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 BEND3Q5T5X7 828 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 C2CD5Q86YS7 1000 aa9.42□□□□□ -0.9
SCN9A-203ENST00000409672 MRPL44Q9H9J2 332 aaKnown RBP9.42□□□□□ -0.9
SCN9A-203ENST00000409672 KIF5AQ12840 1032 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 TNRQ92752 1358 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 DNM1Q05193 864 aaKnown RBP9.41□□□□□ -0.9
SCN9A-203ENST00000409672 NELFCDQ8IXH7 590 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 TMTC2Q8N394 836 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 VPS16Q9H269 839 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 ARHGAP44Q17R89 818 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 MICALCLQ6ZW33 695 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 ANKRD35Q8N283 1001 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 LRFN2Q9ULH4 789 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 TRIM75PA6NK02 468 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 GNA11P29992 359 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 DNAJC25Q9H1X3 360 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 PLCB4Q15147 1175 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 KIFAP3Q92845 792 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 SYNDIG1Q9H7V2 258 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 USP40Q9NVE5 1235 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.41□□□□□ -0.94e-6■■■□□ 17.6
SCN9A-203ENST00000409672 CPA1P15085 419 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 PPP4R3BQ5MIZ7 849 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 MTERF4Q7Z6M4 381 aaKnown RBP9.41□□□□□ -0.9
SCN9A-203ENST00000409672 TTC6Q86TZ1 520 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 RMDN2Q96LZ7 410 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 SV2BQ7L1I2 683 aa9.41□□□□□ -0.9
SCN9A-203ENST00000409672 THRAP3Q9Y2W1 955 aaKnown RBP9.41□□□□□ -0.9
SCN9A-203ENST00000409672 AKAP4Q5JQC9 854 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 DCUN1D2Q6PH85 259 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 BACH2Q9BYV9 841 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 NAP1L4Q99733 375 aaKnown RBP9.4□□□□□ -0.9
SCN9A-203ENST00000409672 DAPK1P53355 1430 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 ATP2A2P16615 1042 aaKnown RBP9.4□□□□□ -0.9
SCN9A-203ENST00000409672 SDSP20132 328 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 SPICE1Q8N0Z3 855 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 TNPO1Q92973 898 aaKnown RBP9.4□□□□□ -0.9
SCN9A-203ENST00000409672 DNAI1Q9UI46 699 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 TNFAIP3P21580 790 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 RTL9Q8NET4 1388 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 TTC21BQ7Z4L5 1316 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 CCDC170Q8IYT3 715 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 SFMBT1Q9UHJ3 866 aa9.4□□□□□ -0.9
SCN9A-203ENST00000409672 UBXN2AP68543 259 aa9.4□□□□□ -0.91
SCN9A-203ENST00000409672 C8orf58Q8NAV2 365 aa9.4□□□□□ -0.91
SCN9A-203ENST00000409672 PYM1Q9BRP8 204 aaKnown RBP9.4□□□□□ -0.91
SCN9A-203ENST00000409672 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.91
SCN9A-203ENST00000409672 AKT3Q9Y243 479 aa9.4□□□□□ -0.91
SCN9A-203ENST00000409672 HFM1A2PYH4 1435 aa9.4□□□□□ -0.91
SCN9A-203ENST00000409672 PDE4DQ08499 809 aa9.4□□□□□ -0.91
SCN9A-203ENST00000409672 CAPN12Q6ZSI9 719 aa9.4□□□□□ -0.91
SCN9A-203ENST00000409672 CASKIN1Q8WXD9 1431 aa9.4□□□□□ -0.91
SCN9A-203ENST00000409672 CLGNO14967 610 aa9.4□□□□□ -0.91
SCN9A-203ENST00000409672 MTHFSDQ2M296 383 aaKnown RBP9.4□□□□□ -0.91
SCN9A-203ENST00000409672 ALDH1L2Q3SY69 923 aa9.4□□□□□ -0.91
SCN9A-203ENST00000409672 LRRC47Q8N1G4 583 aaKnown RBP9.4□□□□□ -0.91
SCN9A-203ENST00000409672 CCDC42Q96M95 316 aa9.4□□□□□ -0.91
SCN9A-203ENST00000409672 IL15P40933 162 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms