RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 CT47B1P0C2W7 299 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 CCL5P13501 91 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 GJA8P48165 433 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 PPIL2Q13356 520 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 SNAPC2Q13487 334 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 ATP2B3Q16720 1220 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 MIGA2Q7L4E1 593 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 FAM151AQ8WW52 585 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 ZNF341Q9BYN7 854 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 ZCCHC17Q9NP64 241 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 GNL3LQ9NVN8 582 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 HDAC5Q9UQL6 1122 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 STXBP5LQ9Y2K9 1186 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 DAGLAQ9Y4D2 1042 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 NR2E3Q9Y5X4 410 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 RPAP1Q9BWH6 1393 aaPredicted RBP11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 BTBD19C9JJ37 291 aa11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 TLR2O60603 784 aa11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 FARP2O94887 1054 aaPredicted RBP11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 LDHBP07195 334 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 PRDX5P30044 214 aa11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 IL15P40933 162 aaPredicted RBP11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 PPATQ06203 517 aa11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 TCP10Q12799 353 aa11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 DIXDC1Q155Q3 683 aa11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 CDC42EP5Q6NZY7 148 aa11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 RASEFQ8IZ41 740 aa11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 API5Q9BZZ5 524 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 MTMR10Q9NXD2 777 aa11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 DENND2AQ9ULE3 1009 aa11.41□□□□□ -0.58
NIF3L1-203ENST00000409129 DDX60LQ5H9U9 1706 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 SEMA3EO15041 775 aa11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 INPP5BP32019 993 aa11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 KIF22Q14807 665 aa11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 TRIM47Q96LD4 638 aa11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 RNF208Q9H0X6 261 aa11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 USP40Q9NVE5 1235 aa11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 ZNF112Q9UJU3 913 aa11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 LRRFIP2Q9Y608 721 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 AK9Q5TCS8 1911 aa11.4□□□□□ -0.58
NIF3L1-203ENST00000409129 SALL1Q9NSC2 1324 aa11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 EVI5O60447 810 aa11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 GJB1P08034 283 aa11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 PHKA1P46020 1223 aa11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 NFIAQ12857 509 aa11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 U2AF1L4Q8WU68 220 aaKnown RBP11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 UNC93B1Q9H1C4 597 aa11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 COPRSQ9NQ92 184 aa11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 FAM198AQ9UFP1 575 aa11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 PA2G4Q9UQ80 394 aaKnown RBP11.39□□□□□ -0.59
NIF3L1-203ENST00000409129 GNRH1P01148 92 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 OSBPP22059 807 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 GRK4P32298 578 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 PSMC4P43686 418 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 CCDC102BQ68D86 513 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 C17orf99Q6UX52 265 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 ANKRD23Q86SG2 305 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 ZFPM1Q8IX07 1006 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 ZGPATQ8N5A5 531 aaKnown RBP11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 MEIS3Q99687 375 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 SRRDQ9UH36 339 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 RAPGEFL1Q9UHV5 662 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 CPA4Q9UI42 421 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 ZMYND8Q9ULU4 1186 aaPredicted RBP11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 KCNH4Q9UQ05 1017 aa11.38□□□□□ -0.59
NIF3L1-203ENST00000409129 PDHXO00330 501 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 ADORA1P30542 326 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 RARSP54136 660 aaKnown RBP11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 TIMM10P62072 90 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 NOL9Q5SY16 702 aaKnown RBP11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 LHX8Q68G74 356 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 RAET1EQ8TD07 263 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 ARHGAP45Q92619 1136 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 GDF15Q99988 308 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 IDI2Q9BXS1 227 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 BIN2Q9UBW5 565 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 TTC28Q96AY4 2481 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 PTPRFP10586 1907 aa11.37□□□□□ -0.59
NIF3L1-203ENST00000409129 MYPNQ86TC9 1320 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 CXCL11O14625 94 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 ENTPD3O75355 529 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 GNAI3P08754 354 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 RGS3P49796 1198 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 PRMT2P55345 433 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 MOGSQ13724 837 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 C7orf61Q8IZ16 206 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 DIS3LQ8TF46 1054 aaKnown RBP11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 FAM163AQ96GL9 167 aaPredicted RBP11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 PRDM6Q9NQX0 595 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 AKAP2Q9Y2D5 859 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 MYH13Q9UKX3 1938 aa11.36□□□□□ -0.59
NIF3L1-203ENST00000409129 GAKO14976 1311 aa11.35□□□□□ -0.59
NIF3L1-203ENST00000409129 PDS5AQ29RF7 1337 aaKnown RBP11.35□□□□□ -0.59
NIF3L1-203ENST00000409129 MUC3AQ02505 3323 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms