RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 PCDHB14Q9Y5E9 798 aa4.24□□□□□ -1.73
CUL3-203ENST00000409096 CCDC84Q86UT8 332 aaPredicted RBP4.23□□□□□ -1.73
CUL3-203ENST00000409096 DDX54Q8TDD1 881 aaKnown RBP4.23□□□□□ -1.73
CUL3-203ENST00000409096 HNRNPLLQ8WVV9 542 aaKnown RBP4.23□□□□□ -1.73
CUL3-203ENST00000409096 DUOXA2Q1HG44 320 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 AKAP4Q5JQC9 854 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 PPM1JQ5JR12 505 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 UBE3DQ7Z6J8 389 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 FERD3LQ96RJ6 166 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 SRRTQ9BXP5 876 aaKnown RBP4.23□□□□□ -1.73
CUL3-203ENST00000409096 PIF1Q9H611 641 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 PPP1R9AQ9ULJ8 1098 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 CNTNAP5Q8WYK1 1306 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 AOC2O75106 756 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 STK10O94804 968 aaKnown RBP4.23□□□□□ -1.73
CUL3-203ENST00000409096 ALX3O95076 343 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 KIAA1211Q6ZU35 1233 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 ACAD11Q709F0 780 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 CPLX3Q8WVH0 158 aa4.23□□□□□ -1.73
CUL3-203ENST00000409096 NTF4P34130 210 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 RBL2Q08999 1139 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 KIF4BQ2VIQ3 1234 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 CCDC144BQ3MJ40 725 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 ZC3H12AQ5D1E8 599 aaKnown RBP4.22□□□□□ -1.73
CUL3-203ENST00000409096 GIMAP6Q6P9H5 292 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 FBXO11Q86XK2 927 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 TNKS2Q9H2K2 1166 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 KRT82Q9NSB4 513 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 ZNRF3Q9ULT6 936 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 HIF3AQ9Y2N7 669 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 FAM86C2PA6NEL3 165 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 HTR3BO95264 441 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 ANKS3Q6ZW76 656 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 LSRQ86X29 649 aaPredicted RBP4.22□□□□□ -1.73
CUL3-203ENST00000409096 CELF2-AS1Q8N7Q2 184 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 ELMO3Q96BJ8 720 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 SPATA32Q96LK8 384 aa4.22□□□□□ -1.73
CUL3-203ENST00000409096 ROBO2Q9HCK4 1378 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 GNB5O14775 395 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 SMAD7O15105 426 aaKnown RBP4.21□□□□□ -1.74
CUL3-203ENST00000409096 TMPRSS2O15393 492 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 COL8A1P27658 744 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 MICAL1Q8TDZ2 1067 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 DPH2Q9BQC3 489 aaPredicted RBP4.21□□□□□ -1.74
CUL3-203ENST00000409096 TMPRSS13Q9BYE2 586 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 REV1Q9UBZ9 1251 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 AP4E1Q9UPM8 1137 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 CCDC85CA6NKD9 419 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 HCLS1P14317 486 aaPredicted RBP4.21□□□□□ -1.74
CUL3-203ENST00000409096 ZNF165P49910 485 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 RING1Q06587 406 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 BMS1Q14692 1282 aaKnown RBP4.21□□□□□ -1.74
CUL3-203ENST00000409096 NKG7Q16617 165 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 CYFIP1Q7L576 1253 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 DTWD1Q8N5C7 304 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 RUSC1Q9BVN2 902 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 FBRSQ9HAH7 460 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 ENAMQ9NRM1 1142 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 RAD18Q9NS91 495 aa4.21□□□□□ -1.74
CUL3-203ENST00000409096 UPK3BL1B0FP48 263 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 UPK3BL2E5RIL1 263 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 KLF4O43474 513 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 WIPF1O43516 503 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 SMARCA5O60264 1052 aaPredicted RBP4.2□□□□□ -1.74
CUL3-203ENST00000409096 GRK4P32298 578 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 GIPRP48546 466 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 RAC1P63000 192 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 COL9A2Q14055 689 aaPredicted RBP4.2□□□□□ -1.74
CUL3-203ENST00000409096 ZYXQ15942 572 aaKnown RBP4.2□□□□□ -1.74
CUL3-203ENST00000409096 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.2□□□□□ -1.74
CUL3-203ENST00000409096 MAP4K3Q8IVH8 894 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 FANCD2OSQ96PS1 177 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 ZSWIM4Q9H7M6 989 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 DISC1Q9NRI5 854 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 KLHL3Q9UH77 587 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 MKL2Q9ULH7 1088 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 NEFMP07197 916 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 ADH5P11766 374 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 PLCG1P19174 1290 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 POLR2BP30876 1174 aaKnown RBP4.2□□□□□ -1.74
CUL3-203ENST00000409096 EIF6P56537 245 aaKnown RBP4.2□□□□□ -1.74
CUL3-203ENST00000409096 TTLL4Q14679 1199 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 EXOSC6Q5RKV6 272 aaKnown RBP4.2□□□□□ -1.74
CUL3-203ENST00000409096 OVOS1Q6IE37 1185 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 HDXQ7Z353 690 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 REXO1Q8N1G1 1221 aaKnown RBP4.2□□□□□ -1.74
CUL3-203ENST00000409096 ARMC5Q96C12 935 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 EHMT1Q9H9B1 1298 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 FAM105AQ9NUU6 356 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 CRIM1Q9NZV1 1036 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 ADAMTS8Q9UP79 889 aa4.2□□□□□ -1.74
CUL3-203ENST00000409096 ACRP10323 421 aa4.19□□□□□ -1.74
CUL3-203ENST00000409096 ELNP15502 786 aa4.19□□□□□ -1.74
CUL3-203ENST00000409096 ETF1P62495 437 aaKnown RBP4.19□□□□□ -1.74
CUL3-203ENST00000409096 TRIM28Q13263 835 aaKnown RBP4.19□□□□□ -1.74
CUL3-203ENST00000409096 PPP2R5EQ16537 467 aa4.19□□□□□ -1.74
CUL3-203ENST00000409096 NUTM2GQ5VZR2 741 aa4.19□□□□□ -1.74
CUL3-203ENST00000409096 ACSF2Q96CM8 615 aaPredicted RBP4.19□□□□□ -1.74
CUL3-203ENST00000409096 HIRIP3Q9BW71 556 aaPredicted RBP4.19□□□□□ -1.74
CUL3-203ENST00000409096 ST7Q9NRC1 585 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms